Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01165 ATGGCGAGGGAGAAAATCAAGATAAAGAAGATTGATAACCTAACGGCGAGACAGGTGACATTCTCTAAGCGAAGGAGAGGGCTTATCAAGAAGGCGGAGGAGCTATCGGTGCTCTGCGACGCCGAAGTAGCGCTGCTCATCTTCTCCGCCACCGGAAAGTTCTTCGAATATTCCAACTCCAGTGTTAAGGATGTTATAGCTAGATATAATTTGCACTCTAGTAATCTTGGAAAGTTGGAATATCCATCCCTTGAGCTGCAGCTTGAAAATGAAAATAGCAATCACGTCCGATTGAACAAGGAAGTTGCAGATATGAGCCAACAACTTAGGCAGATGAGGGGAGAAGATCTTCAAGGATTGAACTTAGAAGATCTGAAGCAATTGGAAAGATTGCTTGAAGTTGGTCTCACACGAGTTCTTCAAACCAAGGAAAAGAAGATTATGAGTGAAATTAGTGCGCTTGAGCTTAAGGGAGCGAGGCTGATGGAAGAAAACAAGATGCTTAGACAGCAGATGTTAAGGTTGTCGAATGAAAGAACGCCAGTGCTCGTGGATTCCGACGTTCATGTGGCGGCGGAAGAAGGGGTTTCGTCGGAATCCGCCGCCAATGTCTGCAGCTGCAACAGCGGCCCTCCTGCCGACGACGACAGCTCCGACACTTCCCTCAAATTAGGCAAAGGCGTGAGGGAGCATCCAGCTGCTCATTGGTTCCATTTTGAGCAACCCAAGTGGGCCAAAAGCTTTGACACAAATCTGTGTTTGGTAAAACTCTGGCTTCTCCTCCCTGTTCATCGGAGCTTGCGCTGCGCTCTGATTTACGAATGTCAACACACTGAGTTCCTTTTGACTCGTTTTCAACTCACCGATCTTCCCTTCATCCCTCTCTTCGCCATGAAGAACGCCCCCGTCAAAGGCCTTGAAGTTTTCGATTTCACCGAAGAAGACGAACTTCCTGAATTGATCTCCGAGAAGCGCCTCAGCAAATTTAAAAACCCTAATCTCGAATCTAACGCTGTTTTGAAGTATGAATTTCTCGAATGTGGTAATTTAACCGTGATCAATGGATTCATTGTTGAAGGGAAGGAGATTGAAAATCCACACATGGATGTTGATTTGGATGAATGTAATCGTGGTTGTGACAATGGTATTTCACATAATCCTTTGGGCACAACTAAAGAGCAACAAATCATGGAAGAAGAGAAATATCAATTGGATGCCAATGCAAAATCAGAAGTGAAATGCCATTTGCAAGATATGATCGTGCAAGTAGATAATCATGTGACACAAAGCCTTTGCTCTCAACTTGGGAAAATTGGATCTAGCTCTCAAAGTCCTACCCAGGGGTTAACTTGCACTCTTCCTGAGTTTACTGCTGAAAGTGAGCAAGTTGATGCACTGTCAGATCCTAATGGAAGCATAAAAGGGAGTTCTCCAGTGAGCCCTCCTTCAGAAACTGTAGAGGATGGTGTTTTGTTGAACGGGAAGTCTTCAGATAATTGCTCATCTGACAATGAAAAGGATGATCTTAGTGACGAGGTTGTCCTTTATCCCGATTATATTGTATGTGGAGATTTTTACTGTGCCAGTCCCTCCTTAACCTTTTCACATAATGGCATCAAAATTAATGGTTTTGCTGATTATGGAAGCAATGAGTACCTTAACCTTGAATGGAGAGTCGACGATGTCATTCATATTGAGTGCCAGTGCTTTCAAAGGGTTGAATATGTGATGATCAAGCTCCATGTTATCTCAAAAGATGCTGGTGAATGTGACAATGCGTGTGACAGTTCTGGCATTAAGGAAGTAAAGATTGTTCTTGTTGATTCTTACTGGTCTGAGAAACAACAAAAAATCAGATCTTTGGATTCCAGATACATGGCTATTTGGAATATGTCTCTCGATGTGGGAATAGGATCCGATGATGATGATTTAAGTGGGCAGAGACACTATTTTCCCAACTTTGATGAGCCTTTTGAAGAAGTTGTCTATCCCAAAGGAGATCCAGATGCTGTTTCCATTAGTAAGAGGGATGTTGACTTGCTGCAACCAGAGACGTTTGTCAATGACACAATCATTGACTTTTACATCCAGTATTTGAAGAGCCAGATAGATCCCAAGGAGAAGCATAGATTTCACTTCTTCAATAGTTTTTTCTTTAGGAAGCTGGCAGACCTTGATAAAGATCCATCAAGTGCTTCAGATGGCAGAGCTGCCTTTCTACGTGTTCGGAAATGGACACGGAAAGTGGATTTATTTGACAAGGATTATATCTTCATTCCTATAAACTTCAATCTTCATTGGAGCTTAATGGTCATATGCCACCCTGGCGAAGTGGCTAGATATAGTGATGAAGACCTGATGAAGTCAATGAAACTTCCGCAGCAGGAAAATTCATTTGATTGCGGATTGTTCTTGCTCCACTATCTAGAACTTTTTCTGGCAGAAGCTCCTCTTGATTTTAGCCCGTTCAAAATCTCCAAGCTTTCAAAATTTCTTAATGTGGATTGGTTCCCACCTGCTGAGGCCTACCTCAAGCGAACTTTAATACAGAGATTAATTTTCGAAATCCTTGATAACCGATCTCGAGAAATGTCCGCAGCTGCTTGCAGTGATGAACTCTTGTCTAAATTTCCATCCAATAATGAGGATGAAACTGGTCTGGAGCTTCTTCCCGAAAGAGGAAGCCCAGCCGTGGCACGCAATCACAATTTGCCAAGCTCACAAGCTGTTGATGGGATTGAAATTACTCTATTATCTGAATCTTCCAGTAGACACAACCACTTCATTGACGGTTCTGGCTTGGTTGTCAGAGAATTATTTGAACCAGGCGCCTCTAATGGACCGTTACTTGGACACTACCAATCTTTTGGTCAAACATCATCGTATTTTGATTCAAATGGTACTGACACAGATGCAGAAACTGGAGACCGTTTCATGTACTTACCTCCACAACAGGATGGTTTGCAGCCAATTGATGCAATGACATCTCAAGCTTGTCGTTTTCCGTGTTCATCGAGAGGCCTTGAATCGGACCCTGCTTTTGACTTATGCATGTCTATTCAACAAGAGCAAGGCGGGGGCATTGCCTCGTCCCCGACAGATGACTTGGAAGACGTGGGAATCATTGAACATTCCAATGTTAGGGAAGCAAGTCCTGGTAACACAGAAGAAAGGAACGGAAAAGGGCCTCTACCGATCGAGAAGGAGAACCTGGAACCTGTAGCAGAATGCCCTACTTCTGCTGCTACCACGAAGAAAGATTTTGATGCCATTGTCTTCTCTCAAGATGACACTAACGAGGAAAATAACGGATCTGATAATCCCATGTGTAAAGAGACTCTCGTTGCACTGCCGCATCTAGATAAAGATATAACAACCAAAACAGACGTCGAACATGATGATGTGCTGGTGGTTGCTTCGGTTACTGAGGTGGACTTAGACGAGCAACCCCCTGCCAAGAAACCAAGGCGTTCGTCATACCACGAAGAAGCGAGTAACAACGGTGTCAGAGAAGGTTTGTTGGATGATGCAGAAAAACGGAAAAAACTGTTATTTTGGCTTTCCTCTCAGTCCCAACTCCGAATCTTCTTTGCCTTCAAAATCCAGTGTCCAATTCAAGCTGTGATCTCCAACAAACCAACAATGGAGCTTCACTACTACACTCATCGCAGCCCATCCCACAGAGCGGCTCTTGCTGGTGTTTTTCTTCTTCTCTTTCCTCTTTTTTATCCCAATCTCTTCCATCCCTTGGGTCGCGCTTCGCCTTCCTTGTTCTCTGAATGGATTTCTCCAAAACCGAGGCACCCGATTTTGCTACACAATGGCTCCTTCCTCATATACACGCATCTGATACCATGCAGTATCACCAAGAAAATCTCAAGGTTACATTCAAGTGTTCTTAGATGGAGGATTGAATCAGCAAAGAATGGGGTTGCCGTTGCCCGAATACTAAATGCAACATTGGTCATACCTCATCTTGAAGTTAACGCTGTTTGGAAGGATTCCAGTTCGTTTGGAGAAATTTTTGATGTGGATCACTTCATTAATGTCCTGCGTGATGATATATCAATAGTCAAAGAGCTGCCTGCTGAATACTCCTGGAGCACAAGGGAATACTATGCTACTGGAATCCGTAATACTAGAATTAAAACAGCTCCCACTCAAGCTTCTGCAAACTGGTACTTGGAAAATGTCTTGCCCGTATTGCAAAGCAATGGGATTGCTGCTATTGCTCCATTCTCTCACCGTCTGTCTTTCAACGACTTGCCTACTGAGATTCAGCATTTGCGTTGTAAGGTCAATTTCAAGGCATTAGCATTTGTTCGTGACATCACTAAATTAGGAGATACCATTGTCAACCGCCTTCGTTACTCTTCAAATCAAAAGGGAATGGAAGGCGCTGAGAATCTGCTAGAGGATGAGACAAGAAAATTGGAAGGTGGGAAATTTGTTGTATTGCATCTCCGATTCGATAAGGGAAGGGTTCCTAACTCACAGTTCACTGATGAAGAGTTGAGATATCAGGGACGTTGCCCCTTGACTCCTGAAGAGATAGGATTGCTGCTAGCTGCTCTGGGGTTTAGCAATAGTACACGTGTCTATCTTGCTATACACAAGGTTTATGGTGGGGAAGCAAGAGTCTCAACTTTGCGCAAAATATTCCCGCTCCTGGAAGATAAGAAGAGCCTTACCTCTCCCTTGGAACGTGCTCGTGTAGCAGGCAAAGCATCATTATCAGCTGCAGTTGATTATTATGTGAGCATGCACAGCGACATCTTCATTTCTGCCTCGCCTGGAAACATGCACAACGCTCTGGTGGGACATCGGGCATACTTGAACATGAAAACTATAAGGCCAAACATGGTACTGTTGGGTCAGCTGTTCCTCAATAAGAGCATGGAATGGTCAGAATTCAGGAAGGCTGTTCTCGCTGGACATAAAAATAGACAAGGGCAGATCAGGTTAAGGAAAGAGAAGCAATCCATATACACTTATCCTGCTCCTGATTGCATGTGCGCTAACCTTATCATTACTCAAATCTACTCATATTATTACAGCTTTGGCTTTCTCTTAAGCTCTGCATTTCATTTTCGCATCGCTTCAAAAATCAGGAGAATAATTGGGAGAAGGCAAACCCTCGGCCTCGAGTTGACTACTCATCAATCATTTTTTGTCGCACCTGGAACTGCAGGCATTTGGCCATCTTTCATATCCTTACTGTTGCCGGGAAACTCACTCCCATTCCTCTGTGTCGAAATTTCTTTTGAATCCAAATCTTCATCAATTGGAAGAGTTCTTTTCGAGCCTTCTAACGCAACTCCCAGGACAATATTCTCCTCCAATGGTGCCCTCGCCACTGATGGCGATGCAGAGGTCTTCTCGCCGTCTTGCTTATTCTGTGAGCTTGAGGAAGGAATATCAGCTTTCTCACTGCTAGGACTGGAAGCTGAGGGAGATCTTTTGGGCGGAGTCCCTCGTGGCATATTGTCCTTGGAATTCATTCCTATGACATCTTTCTTTTCTCCTTTTATCTCATTGCTTGCTAGATTTGATGTTGATCCAGCTGTGTCGGGGGCTTTTGTCCCTGACATTGAGACTGCCTCTTGTTTCGCTTCCTTTTCTTCGTTAGATGAACGAGTGGGACGACTAGAGACTTTG 5658 43.85 MAREKIKIKKIDNLTARQVTFSKRRRGLIKKAEELSVLCDAEVALLIFSATGKFFEYSNSSVKDVIARYNLHSSNLGKLEYPSLELQLENENSNHVRLNKEVADMSQQLRQMRGEDLQGLNLEDLKQLERLLEVGLTRVLQTKEKKIMSEISALELKGARLMEENKMLRQQMLRLSNERTPVLVDSDVHVAAEEGVSSESAANVCSCNSGPPADDDSSDTSLKLGKGVREHPAAHWFHFEQPKWAKSFDTNLCLVKLWLLLPVHRSLRCALIYECQHTEFLLTRFQLTDLPFIPLFAMKNAPVKGLEVFDFTEEDELPELISEKRLSKFKNPNLESNAVLKYEFLECGNLTVINGFIVEGKEIENPHMDVDLDECNRGCDNGISHNPLGTTKEQQIMEEEKYQLDANAKSEVKCHLQDMIVQVDNHVTQSLCSQLGKIGSSSQSPTQGLTCTLPEFTAESEQVDALSDPNGSIKGSSPVSPPSETVEDGVLLNGKSSDNCSSDNEKDDLSDEVVLYPDYIVCGDFYCASPSLTFSHNGIKINGFADYGSNEYLNLEWRVDDVIHIECQCFQRVEYVMIKLHVISKDAGECDNACDSSGIKEVKIVLVDSYWSEKQQKIRSLDSRYMAIWNMSLDVGIGSDDDDLSGQRHYFPNFDEPFEEVVYPKGDPDAVSISKRDVDLLQPETFVNDTIIDFYIQYLKSQIDPKEKHRFHFFNSFFFRKLADLDKDPSSASDGRAAFLRVRKWTRKVDLFDKDYIFIPINFNLHWSLMVICHPGEVARYSDEDLMKSMKLPQQENSFDCGLFLLHYLELFLAEAPLDFSPFKISKLSKFLNVDWFPPAEAYLKRTLIQRLIFEILDNRSREMSAAACSDELLSKFPSNNEDETGLELLPERGSPAVARNHNLPSSQAVDGIEITLLSESSSRHNHFIDGSGLVVRELFEPGASNGPLLGHYQSFGQTSSYFDSNGTDTDAETGDRFMYLPPQQDGLQPIDAMTSQACRFPCSSRGLESDPAFDLCMSIQQEQGGGIASSPTDDLEDVGIIEHSNVREASPGNTEERNGKGPLPIEKENLEPVAECPTSAATTKKDFDAIVFSQDDTNEENNGSDNPMCKETLVALPHLDKDITTKTDVEHDDVLVVASVTEVDLDEQPPAKKPRRSSYHEEASNNGVREGLLDDAEKRKKLLFWLSSQSQLRIFFAFKIQCPIQAVISNKPTMELHYYTHRSPSHRAALAGVFLLLFPLFYPNLFHPLGRASPSLFSEWISPKPRHPILLHNGSFLIYTHLIPCSITKKISRLHSSVLRWRIESAKNGVAVARILNATLVIPHLEVNAVWKDSSSFGEIFDVDHFINVLRDDISIVKELPAEYSWSTREYYATGIRNTRIKTAPTQASANWYLENVLPVLQSNGIAAIAPFSHRLSFNDLPTEIQHLRCKVNFKALAFVRDITKLGDTIVNRLRYSSNQKGMEGAENLLEDETRKLEGGKFVVLHLRFDKGRVPNSQFTDEELRYQGRCPLTPEEIGLLLAALGFSNSTRVYLAIHKVYGGEARVSTLRKIFPLLEDKKSLTSPLERARVAGKASLSAAVDYYVSMHSDIFISASPGNMHNALVGHRAYLNMKTIRPNMVLLGQLFLNKSMEWSEFRKAVLAGHKNRQGQIRLRKEKQSIYTYPAPDCMCANLIITQIYSYYYSFGFLLSSAFHFRIASKIRRIIGRRQTLGLELTTHQSFFVAPGTAGIWPSFISLLLPGNSLPFLCVEISFESKSSSIGRVLFEPSNATPRTIFSSNGALATDGDAEVFSPSCLFCELEEGISAFSLLGLEAEGDLLGGVPRGILSLEFIPMTSFFSPFISLLARFDVDPAVSGAFVPDIETASCFASFSSLDERVGRLETL 1886
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24480113 24511431 - ClCG08G011690.1 Cla08g01165 278820

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01165 1886 MobiDBLite consensus disorder prediction 1146 1167 - -
Cla08g01165 1886 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 305 793 - -
Cla08g01165 1886 MobiDBLite consensus disorder prediction 202 221 - -
Cla08g01165 1886 MobiDBLite consensus disorder prediction 202 216 - -
Cla08g01165 1886 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 SUPERFAMILY Cysteine proteinases 663 855 IPR038765 -
Cla08g01165 1886 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 305 793 - -
Cla08g01165 1886 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Cla08g01165 1886 CDD O-FucT_plant 1309 1617 IPR024709 -
Cla08g01165 1886 MobiDBLite consensus disorder prediction 1147 1167 - -
Cla08g01165 1886 Coils Coil 81 115 - -
Cla08g01165 1886 Gene3D Adenoviral Proteinase; Chain A 654 837 - -
Cla08g01165 1886 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 789 1656 - -
Cla08g01165 1886 Gene3D - 13 80 IPR036879 GO:0003677|GO:0046983
Cla08g01165 1886 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 789 1656 - -
Cla08g01165 1886 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 Pfam GDP-fucose protein O-fucosyltransferase 1309 1612 IPR019378 -
Cla08g01165 1886 Pfam Ulp1 protease family, C-terminal catalytic domain 686 775 IPR003653 GO:0006508|GO:0008234
Cla08g01165 1886 Pfam Ulp1 protease family, C-terminal catalytic domain 790 822 IPR003653 GO:0006508|GO:0008234
Cla08g01165 1886 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cla08g01165 1886 Coils Coil 151 178 - -
Cla08g01165 1886 MobiDBLite consensus disorder prediction 461 507 - -
Cla08g01165 1886 Pfam K-box region 89 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Cla08g01165 1886 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 ProSiteProfiles Ubiquitin-like protease family profile. 671 812 IPR003653 GO:0006508|GO:0008234
Cla08g01165 1886 MobiDBLite consensus disorder prediction 461 483 - -
Cla08g01165 1886 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Cla08g01165 1886 SUPERFAMILY SRF-like 3 74 IPR036879 GO:0003677|GO:0046983
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01165 - - K08596 csv:101206097 1409.05
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01797 Cla-Chr1:32894288 Cla08g01165 Cla-Chr8:24480113 4.48E-07 dispersed
Cla08g01165 Cla-Chr8:24480113 Cla01g00610 Cla-Chr1:6958059 3.10E-69 dispersed
Cla10g00921 Cla-Chr10:21905135 Cla08g01165 Cla-Chr8:24480113 4.14E-54 dispersed
Cla03g01710 Cla-Chr3:33072835 Cla08g01165 Cla-Chr8:24480113 2.54E-11 transposed
Cla05g02536 Cla-Chr5:36728385 Cla08g01165 Cla-Chr8:24480113 5.67E-16 transposed
Cla09g01571 Cla-Chr9:31214768 Cla08g01165 Cla-Chr8:24480113 6.58E-53 transposed
Cla09g01577 Cla-Chr9:31461967 Cla08g01165 Cla-Chr8:24480113 3.31E-96 transposed
Cla01g01796 Cla-Chr1:32884736 Cla08g01165 Cla-Chr8:24480113 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla03g00684 CCT 12 234 MADS-box Gene Family AT3G58780 65.5 1.3e-75 280.0
Cla02g01796 . 1 267 MADS-box Gene Family AT3G58780 57.9 4.6e-73 271.6
Cla01g02351 CCT 7 283 MADS-box Gene Family AT3G58780 52.1 1.9e-66 249.6
Cla04g01139 . 1 245 MADS-box Gene Family AT1G26310 56.1 2.0e-68 256.1
Cla07g01524 . 1 253 MADS-box Gene Family AT1G26310 51.7 1.1e-58 223.8
Cla08g01054 . 1 159 MADS-box Gene Family AT1G26310 65.9 1.3e-56 216.9
Cla08g01053 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.2e-44 177.2
Cla07g01523 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.2e-42 168.7
Cla06g00019 . 1 159 MADS-box Gene Family AT1G26310 58.8 6.1e-41 164.9
Cla03g00684 CCT 20 197 MADS-box Gene Family AT4G09960 74.7 5.8e-67 251.1
Cla08g00042 . 1 236 MADS-box Gene Family AT4G09960 58.9 2.1e-64 242.7
Cla01g02351 CCT 9 238 MADS-box Gene Family AT4G09960 57.0 4.5e-59 224.9
Cla02g01796 . 1 216 MADS-box Gene Family AT4G09960 58.8 5.8e-59 224.6
Cla08g00049 . 1 189 MADS-box Gene Family AT1G71692 52.8 8.5e-49 190.7
Cla06g00019 . 1 242 MADS-box Gene Family AT3G61120 56.3 4.6e-62 235.0
Cla05g00830 . 19 189 MADS-box Gene Family AT3G61120 50.3 6.8e-42 167.9
Cla07g01523 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.2e-41 167.2
Cla06g00195 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.0e-41 166.4
Cla04g01139 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.9e-37 152.1
Cla08g01053 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.9e-37 152.1
Cla01g00316 . 9 216 MADS-box Gene Family AT4G11880 57.3 1.9e-54 209.5
Cla05g00211 . 1 214 MADS-box Gene Family AT4G11880 53.4 4.7e-50 194.9
Cla06g00020 . 1 218 MADS-box Gene Family AT4G11880 53.4 5.2e-49 191.4
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G11880 52.3 1.6e-42 169.9
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G11880 60.6 4.7e-42 168.3
Cla10g01155 . 1 214 MADS-box Gene Family AT5G13790 53.1 4.9e-49 191.8
Cla10g00943 . 1 227 MADS-box Gene Family AT2G22630 52.4 1.0e-55 213.8
Cla01g01782 . 1 160 MADS-box Gene Family AT2G22630 66.9 2.8e-53 205.7
Cla04g00364 . 19 211 MADS-box Gene Family AT3G57390 50.3 4.0e-44 175.3
Cla01g00316 . 9 218 MADS-box Gene Family AT4G22950 58.7 3.0e-57 218.8
Cla05g00211 . 1 214 MADS-box Gene Family AT4G22950 54.8 1.0e-52 203.8
Cla06g00020 . 1 218 MADS-box Gene Family AT4G22950 54.3 1.7e-52 203.0
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G22950 59.8 1.5e-43 173.3
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G22950 52.1 5.6e-43 171.4
Cla07g01523 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.5e-99 357.1
Cla06g00195 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cla08g01053 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.9e-58 223.0
Cla04g01139 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.5e-42 169.5
Cla05g00830 . 19 189 MADS-box Gene Family AT5G15800 55.2 6.2e-41 164.9
Cla06g00020 . 1 162 MADS-box Gene Family AT2G45660 71.0 5.1e-54 207.6
Cla05g00211 . 1 160 MADS-box Gene Family AT2G45660 67.5 1.5e-50 196.1
Cla01g00316 . 9 166 MADS-box Gene Family AT2G45660 65.2 2.9e-49 191.8
Cla01g00524 CCT,ECH 1 158 MADS-box Gene Family AT2G45660 65.2 9.6e-45 176.8
Cla05g00836 CCT,ECH 1 157 MADS-box Gene Family AT2G45660 60.5 5.2e-43 171.0
Cla10g00943 . 1 228 MADS-box Gene Family AT4G37940 52.6 4.3e-56 214.9
Cla01g01782 . 1 155 MADS-box Gene Family AT4G37940 66.5 4.9e-52 201.4
Cla08g01165 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.9e-58 221.9
Cla10g00921 . 1 152 MADS-box Gene Family AT2G22540 59.6 1.8e-42 169.9
Cla08g01165 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.3e-57 219.2
Cla10g00921 . 1 167 MADS-box Gene Family AT4G24540 53.2 1.8e-41 166.4
Cla07g01523 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.2e-57 219.9
Cla08g01053 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.5e-57 217.2
Cla06g00195 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.7e-54 208.8
Cla06g00019 . 1 170 MADS-box Gene Family AT2G03710 54.6 1.2e-41 166.8
Cla07g01523 . 1 170 MADS-box Gene Family AT3G02310 86.5 7.0e-77 283.9
Cla06g00195 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cla08g01053 . 1 170 MADS-box Gene Family AT3G02310 66.7 2.0e-55 212.6
Cla04g01140 . 1 209 MADS-box Gene Family AT3G02310 52.6 4.7e-49 191.4
Cla06g00019 . 1 169 MADS-box Gene Family AT3G02310 61.6 4.0e-48 188.3
Cla05g00830 . 19 205 MADS-box Gene Family AT3G02310 51.6 3.1e-40 162.2
Cla01g00524 CCT,ECH 1 145 MADS-box Gene Family AT5G62165 68.3 4.0e-48 188.0
Cla05g00836 CCT,ECH 1 146 MADS-box Gene Family AT5G62165 64.4 4.9e-46 181.0
Cla06g00020 . 1 154 MADS-box Gene Family AT5G62165 55.8 2.5e-42 168.7
Cla01g00316 . 9 161 MADS-box Gene Family AT5G62165 56.2 2.8e-41 165.2
Cla05g00211 . 1 144 MADS-box Gene Family AT5G62165 62.5 2.8e-41 165.2
Cla10g00943 . 1 239 MADS-box Gene Family AT2G14210 53.8 2.1e-56 216.1
Cla01g01782 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.8e-46 180.6
Cla03g00684 CCT 15 201 MADS-box Gene Family AT2G42830 72.5 3.5e-70 261.9
Cla02g01796 . 1 267 MADS-box Gene Family AT2G42830 57.1 3.7e-67 251.9
Cla01g02351 CCT 7 283 MADS-box Gene Family AT2G42830 51.0 6.7e-61 231.1
Cla08g00042 . 1 192 MADS-box Gene Family AT2G42830 58.9 1.2e-49 193.7
Cla06g00019 . 1 246 MADS-box Gene Family AT2G45650 64.8 1.2e-81 300.1
Cla07g01523 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.1e-54 209.5
Cla05g00830 . 19 190 MADS-box Gene Family AT2G45650 59.8 7.8e-49 191.0
Cla08g01053 . 1 195 MADS-box Gene Family AT2G45650 51.2 3.1e-45 179.1
Cla01g00316 . 9 182 MADS-box Gene Family AT2G45650 52.3 1.5e-36 150.2
Cla01g02387 . 84 200 MADS-box Gene Family AT1G29960 55.6 7.9e-39 156.8
Cla04g01139 . 63 237 MADS-box Gene Family AT1G69120 53.5 1.3e-40 163.3
Cla05g00836 CCT,ECH 1 145 MADS-box Gene Family AT5G51870 57.2 4.6e-41 164.9
Cla01g00524 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 56.0 2.8e-38 155.6
Cla04g01139 . 1 239 MADS-box Gene Family AT3G30260 52.0 1.6e-54 209.9
Cla04g01139 . 63 241 MADS-box Gene Family AT5G60910 54.7 1.6e-43 172.9
Cla06g00195 . 1 242 MADS-box Gene Family AT1G24260 72.9 8.0e-88 320.5
Cla07g01523 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.8e-70 261.2
Cla08g01053 . 1 156 MADS-box Gene Family AT1G24260 66.9 5.1e-50 194.9
Cla06g00019 . 1 245 MADS-box Gene Family AT1G24260 50.2 6.6e-50 194.5
Cla04g01139 . 1 157 MADS-box Gene Family AT1G24260 54.3 8.1e-40 161.0
Cla05g00830 . 19 189 MADS-box Gene Family AT1G24260 51.7 5.8e-38 154.8
Cla05g01900 . 1 248 MADS-box Gene Family AT3G54340 55.6 3.8e-66 248.4
Cla11g01559 . 1 139 MADS-box Gene Family AT5G20240 71.9 2.4e-53 205.3
Cla11g01559 . 1 139 MADS-box Gene Family AT5G20240 71.9 2.4e-53 205.3
Cla05g01900 . 1 248 MADS-box Gene Family AT3G54340 55.6 3.8e-66 248.4
Cla03g00684 CCT 12 234 MADS-box Gene Family AT3G58780 65.5 1.3e-75 280.0
Cla02g01796 . 1 267 MADS-box Gene Family AT3G58780 57.9 4.6e-73 271.6
Cla01g02351 CCT 7 283 MADS-box Gene Family AT3G58780 52.1 1.9e-66 249.6
Cla07g01523 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.5e-99 357.1
Cla06g00195 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cla08g01053 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.9e-58 223.0
Cla04g01139 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.5e-42 169.5
Cla05g00830 . 19 189 MADS-box Gene Family AT5G15800 55.2 6.2e-41 164.9
Cla07g01523 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.2e-57 219.9
Cla08g01053 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.5e-57 217.2
Cla06g00195 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.7e-54 208.8
Cla06g00019 . 1 170 MADS-box Gene Family AT2G03710 54.6 1.2e-41 166.8
Cla07g01523 . 1 170 MADS-box Gene Family AT3G02310 86.5 7.0e-77 283.9
Cla06g00195 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cla08g01053 . 1 170 MADS-box Gene Family AT3G02310 66.7 2.0e-55 212.6
Cla04g01140 . 1 209 MADS-box Gene Family AT3G02310 52.6 4.7e-49 191.4
Cla06g00019 . 1 169 MADS-box Gene Family AT3G02310 61.6 4.0e-48 188.3
Cla05g00830 . 19 205 MADS-box Gene Family AT3G02310 51.6 3.1e-40 162.2
Cla03g00684 CCT 15 201 MADS-box Gene Family AT2G42830 72.5 3.5e-70 261.9
Cla02g01796 . 1 267 MADS-box Gene Family AT2G42830 57.1 3.7e-67 251.9
Cla01g02351 CCT 7 283 MADS-box Gene Family AT2G42830 51.0 6.7e-61 231.1
Cla08g00042 . 1 192 MADS-box Gene Family AT2G42830 58.9 1.2e-49 193.7
Cla06g00019 . 1 246 MADS-box Gene Family AT2G45650 64.8 1.2e-81 300.1
Cla07g01523 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.1e-54 209.5
Cla05g00830 . 19 190 MADS-box Gene Family AT2G45650 59.8 7.8e-49 191.0
Cla08g01053 . 1 195 MADS-box Gene Family AT2G45650 51.2 3.1e-45 179.1
Cla01g00316 . 9 182 MADS-box Gene Family AT2G45650 52.3 1.5e-36 150.2
Cla04g01139 . 63 237 MADS-box Gene Family AT1G69120 53.5 1.3e-40 163.3
Cla04g01139 . 63 241 MADS-box Gene Family AT5G60910 54.7 1.6e-43 172.9
Cla06g00195 . 1 242 MADS-box Gene Family AT1G24260 72.9 8.0e-88 320.5
Cla07g01523 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.8e-70 261.2
Cla08g01053 . 1 156 MADS-box Gene Family AT1G24260 66.9 5.1e-50 194.9
Cla06g00019 . 1 245 MADS-box Gene Family AT1G24260 50.2 6.6e-50 194.5
Cla04g01139 . 1 157 MADS-box Gene Family AT1G24260 54.3 8.1e-40 161.0
Cla05g00830 . 19 189 MADS-box Gene Family AT1G24260 51.7 5.8e-38 154.8
Cla04g01139 . 1 245 MADS-box Gene Family AT1G26310 56.1 2.0e-68 256.1
Cla07g01524 . 1 253 MADS-box Gene Family AT1G26310 51.7 1.1e-58 223.8
Cla08g01054 . 1 159 MADS-box Gene Family AT1G26310 65.9 1.3e-56 216.9
Cla08g01053 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.2e-44 177.2
Cla07g01523 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.2e-42 168.7
Cla06g00019 . 1 159 MADS-box Gene Family AT1G26310 58.8 6.1e-41 164.9
Cla03g00684 CCT 20 197 MADS-box Gene Family AT4G09960 74.7 5.8e-67 251.1
Cla08g00042 . 1 236 MADS-box Gene Family AT4G09960 58.9 2.1e-64 242.7
Cla01g02351 CCT 9 238 MADS-box Gene Family AT4G09960 57.0 4.5e-59 224.9
Cla02g01796 . 1 216 MADS-box Gene Family AT4G09960 58.8 5.8e-59 224.6
Cla08g00049 . 1 189 MADS-box Gene Family AT1G71692 52.8 8.5e-49 190.7
Cla06g00019 . 1 242 MADS-box Gene Family AT3G61120 56.3 4.6e-62 235.0
Cla05g00830 . 19 189 MADS-box Gene Family AT3G61120 50.3 6.8e-42 167.9
Cla07g01523 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.2e-41 167.2
Cla06g00195 . 1 170 MADS-box Gene Family AT3G61120 55.8 2.0e-41 166.4
Cla04g01139 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.9e-37 152.1
Cla08g01053 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.9e-37 152.1
Cla01g00316 . 9 216 MADS-box Gene Family AT4G11880 57.3 1.9e-54 209.5
Cla05g00211 . 1 214 MADS-box Gene Family AT4G11880 53.4 4.7e-50 194.9
Cla06g00020 . 1 218 MADS-box Gene Family AT4G11880 53.4 5.2e-49 191.4
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G11880 52.3 1.6e-42 169.9
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G11880 60.6 4.7e-42 168.3
Cla10g01155 . 1 214 MADS-box Gene Family AT5G13790 53.1 4.9e-49 191.8
Cla10g00943 . 1 227 MADS-box Gene Family AT2G22630 52.4 1.0e-55 213.8
Cla01g01782 . 1 160 MADS-box Gene Family AT2G22630 66.9 2.8e-53 205.7
Cla04g00364 . 19 211 MADS-box Gene Family AT3G57390 50.3 4.0e-44 175.3
Cla01g00316 . 9 218 MADS-box Gene Family AT4G22950 58.7 3.0e-57 218.8
Cla05g00211 . 1 214 MADS-box Gene Family AT4G22950 54.8 1.0e-52 203.8
Cla06g00020 . 1 218 MADS-box Gene Family AT4G22950 54.3 1.7e-52 203.0
Cla05g00836 CCT,ECH 1 168 MADS-box Gene Family AT4G22950 59.8 1.5e-43 173.3
Cla01g00524 CCT,ECH 1 210 MADS-box Gene Family AT4G22950 52.1 5.6e-43 171.4
Cla06g00020 . 1 162 MADS-box Gene Family AT2G45660 71.0 5.1e-54 207.6
Cla05g00211 . 1 160 MADS-box Gene Family AT2G45660 67.5 1.5e-50 196.1
Cla01g00316 . 9 166 MADS-box Gene Family AT2G45660 65.2 2.9e-49 191.8
Cla01g00524 CCT,ECH 1 158 MADS-box Gene Family AT2G45660 65.2 9.6e-45 176.8
Cla05g00836 CCT,ECH 1 157 MADS-box Gene Family AT2G45660 60.5 5.2e-43 171.0
Cla10g00943 . 1 228 MADS-box Gene Family AT4G37940 52.6 4.3e-56 214.9
Cla01g01782 . 1 155 MADS-box Gene Family AT4G37940 66.5 4.9e-52 201.4
Cla08g01165 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.9e-58 221.9
Cla10g00921 . 1 152 MADS-box Gene Family AT2G22540 59.6 1.8e-42 169.9
Cla08g01165 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.3e-57 219.2
Cla10g00921 . 1 167 MADS-box Gene Family AT4G24540 53.2 1.8e-41 166.4
Cla01g00524 CCT,ECH 1 145 MADS-box Gene Family AT5G62165 68.3 4.0e-48 188.0
Cla05g00836 CCT,ECH 1 146 MADS-box Gene Family AT5G62165 64.4 4.9e-46 181.0
Cla06g00020 . 1 154 MADS-box Gene Family AT5G62165 55.8 2.5e-42 168.7
Cla01g00316 . 9 161 MADS-box Gene Family AT5G62165 56.2 2.8e-41 165.2
Cla05g00211 . 1 144 MADS-box Gene Family AT5G62165 62.5 2.8e-41 165.2
Cla10g00943 . 1 239 MADS-box Gene Family AT2G14210 53.8 2.1e-56 216.1
Cla01g01782 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.8e-46 180.6
Cla01g02387 . 84 200 MADS-box Gene Family AT1G29960 55.6 7.9e-39 156.8
Cla05g00836 CCT,ECH 1 145 MADS-box Gene Family AT5G51870 57.2 4.6e-41 164.9
Cla01g00524 CCT,ECH 1 144 MADS-box Gene Family AT5G51870 56.0 2.8e-38 155.6
Cla04g01139 . 1 239 MADS-box Gene Family AT3G30260 52.0 1.6e-54 209.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001964 1 5 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 4 2 2 2 2 2 2 2 2 1 3 5 1 65
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61576 PF10250 O-FucT 2.10E-45 CL0113 Cla TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla08g01165 Cla_Chr08 FPKM 11.291687 12.491009 7.704311 8.270873 10.860355 9.197254 11.710369 2.270335 1.974091 2.319628