Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01178 | ATGTCATCGTCCCCAACTTTAATCCAACGGCTCTCATTTAACGCTTATTCTACGTTCGTCGTAGTCTGTACCATTTTTTTCTGCTCGCCGGAGTTCAAAATGGCCGCCACCGTGCCGGAAAATCTCTCTCGCGAGCAATATGTGTATCTAGCGAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCTGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTACAGATCAAAGGTTGAGGCTGAGCTTTCCGACGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCCGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCTCAGGACCAGTTAGATGAGTCATAG | 858 | 47.79 | MSSSPTLIQRLSFNAYSTFVVVCTIFFCSPEFKMAATVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVEAELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24669651 | 24674073 | + | ClCG08G011820.2 | Cla08g01178 | 278833 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01178 | 285 | ProSitePatterns | 14-3-3 proteins signature 2. | 257 | 276 | IPR023409 | - | |
Cla08g01178 | 285 | SMART | 1433_4 | 44 | 284 | IPR023410 | - | |
Cla08g01178 | 285 | PANTHER | 14-3-3 PROTEIN | 41 | 281 | IPR000308 | - | |
Cla08g01178 | 285 | PIRSF | 14-3-3 | 39 | 285 | IPR000308 | - | |
Cla08g01178 | 285 | Gene3D | - | 28 | 285 | IPR036815 | - | |
Cla08g01178 | 285 | Pfam | 14-3-3 protein | 50 | 275 | IPR023410 | - | |
Cla08g01178 | 285 | Coils | Coil | 50 | 70 | - | - | |
Cla08g01178 | 285 | PANTHER | BNAC02G00320D PROTEIN | 41 | 281 | - | - | |
Cla08g01178 | 285 | SUPERFAMILY | 14-3-3 protein | 43 | 277 | IPR036815 | - | |
Cla08g01178 | 285 | PRINTS | 14-3-3 protein zeta signature | 79 | 108 | IPR000308 | - | |
Cla08g01178 | 285 | PRINTS | 14-3-3 protein zeta signature | 248 | 277 | IPR000308 | - | |
Cla08g01178 | 285 | PRINTS | 14-3-3 protein zeta signature | 128 | 152 | IPR000308 | - | |
Cla08g01178 | 285 | PRINTS | 14-3-3 protein zeta signature | 159 | 181 | IPR000308 | - | |
Cla08g01178 | 285 | PRINTS | 14-3-3 protein zeta signature | 194 | 220 | IPR000308 | - | |
Cla08g01178 | 285 | PRINTS | 14-3-3 protein zeta signature | 221 | 247 | IPR000308 | - | |
Cla08g01178 | 285 | ProSitePatterns | 14-3-3 proteins signature 1. | 85 | 95 | IPR023409 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01123 | Cla-Chr8:23987753 | Cla08g01178 | Cla-Chr8:24669651 | 2.24E-133 | dispersed | |
Cla08g01178 | Cla-Chr8:24669651 | Cla11g01392 | Cla-Chr11:27459767 | 4.99E-135 | dispersed | |
Cla11g01412 | Cla-Chr11:27684693 | Cla08g01178 | Cla-Chr8:24669651 | 7.50E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01178 | K06630 | - | csv:101222827 | 481.87 |