Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01182 | ATGGTGGTTAGAAAAGTCGGCAAATACGAGGTCGGGAGGACGATTGGGGAAGGTACTTTCGCAAAGGTAAAGTTTGCTCAGAACACTGAGACTGGCGAGAGTGTTGCTATGAAAGTCCTCGATCGGAGCACCATAATCAAGCACAAGATGGTCGACCAGATAAAGAAGGAGATTTCTATCATGAAGCTTGTGAGGCACCCTTATGTTGTTCGTCTTCATGAGGTTCTTGCAAGCCGTACAAAGATTTACATAATCTTGGAGTACATTACTGGTGGTGAATTGTTTGACAAAATAGTTCATAATGGACGGCTTAGTGAAGCTGAATCTAGGAAGTATTTCCAACAGCTAATTGATGGTGTAGATTATTGCCACAGCAAGGGAGTATACCACAGAGATTTAAAGCCTGAGAATCTGCTACTTGACTCCCTCGGTAATTTAAAGATCTCAGACTTTGGTCTGAGTGCATTGCCTGAACAAGGAGTTAGCCTACTCCGCACAACATGTGGGACTCCAAACTATGTAGCACCAGAGGTGCTCAATCACAAGGGTTATGATGGTGCTATGGCAGACGTTTGGTCCTGTGGGGTAATCCTTTATGTGTTGATGGCAGGATATCTTCCATTTGACGACCTTGATCTCACCACGTTATATAGTAAGATTGAGAGAGCCGACTTTTCATGTCCCTCTTGGTTCCCGGTGGGGGCAAAAGCCTTAATCCAAAGAATATTTGATCCCAATCCTTCAACTCGTATTACAATTGAACAGATCAGAGAGGAAGAGTGGTTCAAGAAAAATTATGTTTCTGTCAAACTGTTTGAAGATGAAGATGTAAATCTGGATGATGTAAATGCTGTCTTTGATGATCCTGAGGAACAACTGACAGAAGAACAACACGGTCACGACGATATGAGCCCTCTGGCCCTTAATGCATTTGATTTAATAATTCTATCTCAAGGCTTAAACCTGGGAACAATGTTTGACCGTGGCCGGGATTCTATGAAGTACCCGACACGCTTCATCTGCCAAAAGCCTGCAAAGGTTTTACTGTCAACAATGGAAGTTGTAGCTCAATCAATGGGTTACAAGACTCACATTCGCAATTACAAGATGAGAGTAGAAGGCCCATCGGCAAGCAAAACTTCGTATTTCTCAGTCATTATGGAAATTTTCGAAGTTGCTCCCACATTCTTTATGGTGGACATCCAGAAAGCAGCAGGGGAAACCAGCGAATACCTCAAGTTCTACAAGAGCTTTTATAGCAAACTTGAAGATATCATCTGGAAACCTTCAATTGACACCGGCAAATCAAGGATCACCAAGAACAAGAGTAAAAAACGTTGA | 1341 | 42.58 | MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIILEYITGGELFDKIVHNGRLSEAESRKYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNLKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLNHKGYDGAMADVWSCGVILYVLMAGYLPFDDLDLTTLYSKIERADFSCPSWFPVGAKALIQRIFDPNPSTRITIEQIREEEWFKKNYVSVKLFEDEDVNLDDVNAVFDDPEEQLTEEQHGHDDMSPLALNAFDLIILSQGLNLGTMFDRGRDSMKYPTRFICQKPAKVLLSTMEVVAQSMGYKTHIRNYKMRVEGPSASKTSYFSVIMEIFEVAPTFFMVDIQKAAGETSEYLKFYKSFYSKLEDIIWKPSIDTGKSRITKNKSKKR | 446 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24692033 | 24700163 | - | ClCG08G011860.2 | Cla08g01182 | 278837 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01182 | 446 | ProSiteProfiles | NAF domain profile. | 303 | 327 | IPR018451 | GO:0007165 | |
Cla08g01182 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 306 | - | - | |
Cla08g01182 | 446 | CDD | CIPK_C | 309 | 424 | - | - | |
Cla08g01182 | 446 | Pfam | NAF domain | 305 | 363 | IPR004041 | GO:0007165 | |
Cla08g01182 | 446 | PANTHER | - | 2 | 443 | - | - | |
Cla08g01182 | 446 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 47 | IPR017441 | GO:0005524 | |
Cla08g01182 | 446 | Gene3D | Kinase associated domain 1, KA1 | 307 | 428 | - | - | |
Cla08g01182 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 286 | IPR011009 | - | |
Cla08g01182 | 446 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 2 | 443 | - | - | |
Cla08g01182 | 446 | SMART | serkin_6 | 9 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla08g01182 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 | |
Cla08g01182 | 446 | Pfam | Protein kinase domain | 9 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla08g01182 | 446 | ProSiteProfiles | Protein kinase domain profile. | 9 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00055 | Cla-Chr5:609156 | Cla08g01182 | Cla-Chr8:24692033 | 3.03E-169 | dispersed | |
Cla06g01118 | Cla-Chr6:24015221 | Cla08g01182 | Cla-Chr8:24692033 | 4.66E-179 | dispersed | |
Cla08g01182 | Cla-Chr8:24692033 | Cla02g01868 | Cla-Chr2:33859354 | 5.48E-147 | dispersed | |
Cla08g01182 | Cla-Chr8:24692033 | Cla03g00613 | Cla-Chr3:7315854 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80750 | PF00069 | Pkinase | 2.60E-71 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01182 | - | - | csv:101222107 | 841.647 |