Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01226 | ATGGATTCCGTCCTTGAACTAGCCGAAATATCAATGGCCAGAATTGCAATGGGAAGCATCGGCGAGGCCTCCCAGCCCGACTGCATCCGAGCCCTCATTGTCGAGTTCATTGTCACTTTCCTCTTCGTCTTCGCTGGCGTCGGATCAGCCATGGCTGCCAATGCGTTATTGGCAAACACACTAGTGGGTTTATTTGCCGTTGCCGTCGCACATGCGCTTGTAGTGGCTGTGATGATTTCCACAGGTCATATTTCCGGTGGCCACCTCAACCCCGCCGTCACTCTTGGTCTCCTTTTGGGTGGCCACATCACAGTTGTTCGATCCGCTCTATATTGGATCGTTCAGTTACTAGCAGCTTCAGCTGCTAGCTTTTTGTTAACGTACCTCACCGGAGGCTTGGTGAGTCTATATTCTTTCCTTCATCTCAGTACAAATCCATTTTCAAGATCTCATCTTCCATTCAACTATATAAAAGCAACTATTTATATTCATCGCCACAATCCAACTAGCAGTTTTTCACTGATATATGAAAAAGAAATCCTCGAATTTACATTAGTGCTATTAGAGAACATGTCATGGCGAACTCACAGAATAACTTATCCAACTATTGTCACTCCAATTCATACATTAGCAAGCGGAGTTGGTTATATTCAGGGAGTGATATGGGAGATTATTCTAACCTTTTCCTTGCTATTCACTGTGTATGGAACAATTGTTGACCCAAAAAAGGGGGCTCTTGATGGGCTGGGTCCATTGCTGACTGGGTTTGTGGTGGGAGCCAACATCTTGGCTGGTGGGGCTTTTTCAGGAGCTTCAATGAACCCAGCAAGATCATTTGGGCCAGCTTTGGTGGCTGGAGACTGGACTGACCATTGGGTTTACTGGGTTGGGCCTCTTATTGGTGGTGGGCTTGCTGGATTCATCTATGAAAATTTTCTCATTCAAAGATCTCATGTGCCTCTACCTAGGGAGGAAGATGGCTATTAG | 987 | 46.0 | MDSVLELAEISMARIAMGSIGEASQPDCIRALIVEFIVTFLFVFAGVGSAMAANALLANTLVGLFAVAVAHALVVAVMISTGHISGGHLNPAVTLGLLLGGHITVVRSALYWIVQLLAASAASFLLTYLTGGLVSLYSFLHLSTNPFSRSHLPFNYIKATIYIHRHNPTSSFSLIYEKEILEFTLVLLENMSWRTHRITYPTIVTPIHTLASGVGYIQGVIWEIILTFSLLFTVYGTIVDPKKGALDGLGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVAGDWTDHWVYWVGPLIGGGLAGFIYENFLIQRSHVPLPREEDGY | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 25167953 | 25169515 | - | ClCG08G012280.2 | Cla08g01226 | 278881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01226 | 328 | PANTHER | AQUAPORIN-8 | 13 | 134 | IPR034294 | - | |
Cla08g01226 | 328 | ProSitePatterns | MIP family signature. | 88 | 96 | IPR022357 | - | |
Cla08g01226 | 328 | Gene3D | Glycerol uptake facilitator protein. | 13 | 323 | IPR023271 | - | |
Cla08g01226 | 328 | PANTHER | AQUAPORIN TIP4-1 | 13 | 134 | - | - | |
Cla08g01226 | 328 | PRINTS | Major intrinsic protein family signature | 107 | 126 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla08g01226 | 328 | PRINTS | Major intrinsic protein family signature | 292 | 312 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla08g01226 | 328 | PRINTS | Major intrinsic protein family signature | 30 | 49 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla08g01226 | 328 | PRINTS | Major intrinsic protein family signature | 255 | 277 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla08g01226 | 328 | PRINTS | Major intrinsic protein family signature | 70 | 94 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla08g01226 | 328 | PANTHER | AQUAPORIN TIP4-1 | 203 | 326 | - | - | |
Cla08g01226 | 328 | Pfam | Major intrinsic protein | 23 | 309 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla08g01226 | 328 | PANTHER | AQUAPORIN-8 | 203 | 326 | IPR034294 | - | |
Cla08g01226 | 328 | SUPERFAMILY | Aquaporin-like | 25 | 322 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00933 | Cla-Chr4:24297743 | Cla08g01226 | Cla-Chr8:25167953 | 1.32E-19 | dispersed | |
Cla08g01226 | Cla-Chr8:25167953 | Cla09g00167 | Cla-Chr9:1719283 | 2.17E-26 | dispersed | |
Cla08g01226 | Cla-Chr8:25167953 | Cla10g01892 | Cla-Chr10:34818950 | 3.40E-24 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01226 | K09873 | - | thj:104803763 | 289.271 |