Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01246 | ATGAAGCGTAGCGCCTCCGAGTTGGCTCTTGAAGAGTTCCTCAAAAAAGCCGCCATCATCTCTCCCGACGACGACGTTATCGACCCCGACGACGAGGACGTTTTCAAAATCGAACAACAACAAATCATCAGAAGCCCAAAAAGAGGCAGAAACTTTCAGGATTCCGCCGATGCCACCTGCTTCTTCGGCGATATTGATTTCAGCTGTTTCCTCGTCAAAAATAATCGGGAGATAATGGACGCAATTGTTAACTGTGGAGGTGGGCTGGCGGAGGCTCCTTTATGGTCACAGAATCTCACTCCTAAGCATTCAAGCTTTTCAGCCACTATAGATTCCCAGTCTTCTATTGTGAGCAGCCCAACATCAGCCAGTAATTTGATGGGCAGAGAGCACCAAAGAGGTAACAATAGTGGGTCCTCTGAAGATCAATCTGATGATGAAATTGAAGCTGGCTCTTGTGAACAAAGCACTGACCCTCTTGCTTTGAAGAGAATCAGAAGAATGATCTCTAACAGGGACTCTGCTAGAAGGTCAAGAAGAAGAAAACAAGCTCATTTGGCTGAACTCGAGAACCAGGTGAAACAATTGAAAGGAGAAAATGAAACCTTGTTCAACCAACTTTTAGATGCTAGTCAACAATATCGTGATGCCAATACGAACAACCGTGTGCTTAAATCAGACGTAGACGCATTGAGAGCTAAGGTGAAGTTGGCGGAAGATACACTTGCTAGAGGCTCAATGACCTGTAGCTTGAATCAGCTGCTGCAGAGTCATTTGAGCACACCACAGCCACTCACGGCACTCAGACGAATGTCAAATGTCGCACCGCCGCTCGGTTTACCTGGAGACGAAGTTTCTTATTCCTGCGTGACAATGTCGGGGCAGAACCCGACCGTGGGGCTCCCGAACTCAGATATGCATATGAAAACAGGAATGGGTAGTGAGGCTGTTAGCTGTGTTTCAGGGATTTGGCCTAGAAATTAG | 984 | 46.85 | MKRSASELALEEFLKKAAIISPDDDVIDPDDEDVFKIEQQQIIRSPKRGRNFQDSADATCFFGDIDFSCFLVKNNREIMDAIVNCGGGLAEAPLWSQNLTPKHSSFSATIDSQSSIVSSPTSASNLMGREHQRGNNSGSSEDQSDDEIEAGSCEQSTDPLALKRIRRMISNRDSARRSRRRKQAHLAELENQVKQLKGENETLFNQLLDASQQYRDANTNNRVLKSDVDALRAKVKLAEDTLARGSMTCSLNQLLQSHLSTPQPLTALRRMSNVAPPLGLPGDEVSYSCVTMSGQNPTVGLPNSDMHMKTGMGSEAVSCVSGIWPRN | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 25387612 | 25391512 | - | ClCG08G012480.1 | Cla08g01246 | 278901 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01246 | 327 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 161 | 224 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01246 | 327 | MobiDBLite | consensus disorder prediction | 106 | 155 | - | - | |
Cla08g01246 | 327 | SUPERFAMILY | Leucine zipper domain | 163 | 212 | IPR046347 | GO:0003700|GO:0006355 | |
Cla08g01246 | 327 | CDD | bZIP_plant_GBF1 | 181 | 215 | IPR045314 | GO:0003700|GO:0006355 | |
Cla08g01246 | 327 | MobiDBLite | consensus disorder prediction | 106 | 141 | - | - | |
Cla08g01246 | 327 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 166 | 181 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01246 | 327 | Gene3D | - | 162 | 218 | - | - | |
Cla08g01246 | 327 | Pfam | bZIP transcription factor | 161 | 207 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01246 | 327 | PANTHER | BASIC LEUCINE ZIPPER 9 | 1 | 325 | - | - | |
Cla08g01246 | 327 | Coils | Coil | 172 | 241 | - | - | |
Cla08g01246 | 327 | PANTHER | BASIC LEUCINE ZIPPER 63 | 1 | 325 | - | - | |
Cla08g01246 | 327 | SMART | brlzneu | 159 | 223 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01246 | Cla-Chr8:25387612 | Cla09g00691 | Cla-Chr9:6707105 | 1.13E-14 | dispersed | |
Cla08g01246 | Cla-Chr8:25387612 | Cla02g01633 | Cla-Chr2:31106234 | 1.59E-26 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61585 | PF00170 | bZIP_1 | 1.90E-14 | CL0018 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01246 | K25784 | - | csv:101210908 | 530.791 |