Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01268 | ATGGCCGGCAATCATAAGGCTATCACTCTCGAGGAGATTAAAAACGAAGCCGTTGATCTGATAGAATCGCTGACGAATGAATTCGGCCGGATTATTCTCCGTTTGTTTGCGACTTTTCTGTGCGATGATTCGATCGATGATCGTATTCGCGTTGCAGCGGAGATGAATCATCGATTCGGATGTTTGTTTGTAGTTACTCTGTTTACTGGATCAGTTTGCTTATTCTTTAATGTTTACACGACTGAAAATTTGGCGTTAAACATCAGGCCGAACGACATTTTTCACAAAGTAGTAGGGAAATCGGAATTAGAATTCCCACTGCCGCGTCTACGCCGTGATTTCTCTGGCGATATGGCGGACGCAATAGCCGGGGATGGCTTCTCCCCTCTTCATTTCTGTTTTCCATTTTATTTTCGATCCCCGCCAAGTTCTCCACGAAGATCAGGGCGGAGATTCCTTCAGGAACATATTCCAATAGAGGAAGTGTTTGAACAGTTGAAATGTACACGAGAAGGTCTGACATCAGAGGAAGGAGCCCATCGGCTTCAAGTTTTTGGTCCCAACAAACTAGAAGAGAAGAAGGAAAGCAAAATTCTCAAGTTTTTGGGTTTCATGTGGAATCCTTTATCTTGGGTAATGGAAGCTGCTGCCTTAATGGCTATAGTCCTGGCAAATGGTGGTGGAAGACCACCAGACTGGCAAGACTTTGTGGGGATCATTGCTTTACTTTTTATCAACTCTACCATTAGTTTTATTGAAGAAAACAACGCTGGTAACGCGGCTGCAGCACTCATGGCTGGTCTTGCTCCTAAAACTAAGGTTCTAAGAGATGGTCGTTGGAGTGAACAAGAGGCTGCTATTCTTGTTCCGGGAGATATCATAAGCATTAAGCTTGGAGATATAATACCAGCAGATGCCCGTCTTCTGGAGGGCGATCCTTTAAAAATTGATCAATCTGCTTTAACTGGAGAATCGCTCCCAGTCACCAAGAACCCCTCAGACGAAGTGTTTTCTGGCTCTACATGTAAACAAGGTGAAATTGAAGCAGTTGTGATTGCCACTGGTGTGCACACATTTTTTGGCAAAGCAGCTCACTTGGTAGATAGCACCAATCAAGTTGGACATTTCCAGAAAGTTCTTACTGCTATTGGTAATTTCTGCATTTGCTCGATCGCTGTTGGAATACTAATCGAGCTTATAGTTATGTACCCAATACAACGACGCAAGTATAGAGATGGAATTGACAACTTGCTAGTGCTTTTGATTGGTGGAATTCCTATTGCCATGCCAACCGTTTTGTCTGTCACCATGGCCATTGGTTCTCATAGGCTTTCTCAGCAGGGTGCCATTACGAAGAGAATGACAGCCATTGAGGAAATGGCTGGCATGGATGTCCTCTGCAGTGATAAGACGGGAACTCTGACCTTGAACAAGCTAACCGTGGATAGAAGCTTGATCGAAGTGTTTGTCAAGGGTGTCGAGAAAGAGTATGTTATTCTTCTTGCGGCTAGGGCTTCTAGAACGGAGAATCAAGATGCCATTGATGCAGCTATAGTAGGAATGCTTGCGGATCCTAAAGAGGCACGAGCAGGAATTAGAGAGGTTCATTTCCTTCCATTCAATCCTGTTGACAAAAGAACTGCCCTTACTTATATCGACTCTAATGGAATTTGGCACCGAGTAAGCAAAGGTGCTCCTGAGCAGATCCTGAATCTTTGCAACTCTAGGGAAGACGTTAGAAGAAAGGTTCATGCAGTGATTGACAAGTTTGCAGAGCGTGGACTTCGTTCATTGGGCGTTGCAAGACAGGAAGTACCTGAAAAAACAAAAGATAGCCCGGGAGGACCGTGGCAGCTTGTTGGTTTGTTGCCTCTATTTGATCCTCCTAGGCACGATAGTGCAGAAACCATAAGAAGAGCTCTAAACCTTGGAGTAAATGTGAAGATGATTACTGGGGATCAACTTGCCATTGCCAAGGAAACCGGGCGTAGACTTGGTATGGGAACAAATATGTACCCTTCTTCATCATTACTTGGTCAAGACAAGGATGAATCTATTGCTTCACTTCCTGTGGATGAGTTGATCGAGAAGGCAGATGGGTTTGCTGGAGTATTCCCAGAACACAAATATGAAATTGTGAAAAGGCTGCAGGAAAGGAAACATATATGTGGAATGACTGGTGATGGTGTTAATGATGCTCCTGCTTTAAAGAAGGCAGATATTGGAATTGCTGTTGCGGATGCTACTGATGCTGCTAGAGGTGCTTCGGATATTGTCCTCACAGAACCAGGATTGAGTGTCATTATTAGTGCGGTGCTAACCAGTAGGGCTATTTTTCAGAGAATGAAGAATTACACGATTTATGCCGTTTCAATTACCATTCGTATAGTGTTTGGCTTCATGTTCATTGCTTTGATTTGGAAGTTTGACTTTGCTCCCTTTATGGTTTTAATAATAGCCATTCTGAATGATGGAACAATTATGACAATTTCAAAGGATCGAGTAAAGCCATCTCCACAGCCTGATAGTTGGAAACTGAAGGAGATTTTTGGAACTGGCATTGTGCTTGGAGGATACATGGCACTAATGACAGTGTTATTCTTTTGGGCTGTGAAAGATACCAACTTTTTCTCCGAAAAATTTAATGTGAAACCCTTGAAGGATAGTCCTCAAGAATTGATGGCAGCCTTGTACCTACAAGTCAGCATAATAAGTCAGGCACTTATCTTTGTCACGAGGTCTCGCAGCTGGTCATACTTGGAACGTCCTGGACTCCTCCTAGTCGGCGCTTTCATCATTGCTCAGCTGGTGGCAACAGTGATAGCTGTTTATGCAAATTGGGGTTTTGCAAGGATCAAAGGAATGGGATGGGGTTGGGCTGGTGTTATCTGGCTGTACAGCTTGGTAACATACATCCCTCTCGACATTTTGAAATTTGGAATCCGATATGCCCACAGTGGAAAGGCTTGGGACACTCTTTTGGAGAACAAGACTGCGTTCACAACGAAAAAGGATTATGGAAAAGAAGAGAGAGAAGCACAATGGGCAGCTGCACAGAGGACTCTACATGGTCTTCAACCACCTGAAAACTCCAATCTCTTCCCTGAGAAAAGTAGTTATAGGGAGCTTTCCGAGATTGCTGAGCAAGCCAAACGCCGCGCTGAGGTTGCAAGGCTCCGTGAATTGCATACACTAAAGGGACATGTTGAATCAGTAGTAAAGCTGAAGGGATTGGACATTGATACAATCCAACAACACTACACAGTTTAA | 3270 | 43.85 | MAGNHKAITLEEIKNEAVDLIESLTNEFGRIILRLFATFLCDDSIDDRIRVAAEMNHRFGCLFVVTLFTGSVCLFFNVYTTENLALNIRPNDIFHKVVGKSELEFPLPRLRRDFSGDMADAIAGDGFSPLHFCFPFYFRSPPSSPRRSGRRFLQEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVEKEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGIWHRVSKGAPEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVPEKTKDSPGGPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGIVLGGYMALMTVLFFWAVKDTNFFSEKFNVKPLKDSPQELMAALYLQVSIISQALIFVTRSRSWSYLERPGLLLVGAFIIAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFGIRYAHSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPENSNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV | 1089 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 25581049 | 25590699 | - | ClCG08G012700.1 | Cla08g01268 | 278923 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01268 | 1089 | Gene3D | - | 232 | 953 | - | - | |
Cla08g01268 | 1089 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 155 | 1069 | - | - | |
Cla08g01268 | 1089 | Gene3D | - | 1038 | 1089 | - | - | |
Cla08g01268 | 1089 | SFLD | p-type atpase | 449 | 777 | IPR044492 | - | |
Cla08g01268 | 1089 | SMART | Cation_ATPase_N_a_2 | 153 | 225 | IPR004014 | - | |
Cla08g01268 | 1089 | SUPERFAMILY | HAD-like | 463 | 773 | IPR036412 | - | |
Cla08g01268 | 1089 | Gene3D | - | 270 | 354 | - | - | |
Cla08g01268 | 1089 | PRINTS | H+-transporting ATPase (proton pump) signature | 898 | 919 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | PRINTS | H+-transporting ATPase (proton pump) signature | 726 | 742 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | PRINTS | H+-transporting ATPase (proton pump) signature | 698 | 714 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | PRINTS | H+-transporting ATPase (proton pump) signature | 757 | 782 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | PRINTS | H+-transporting ATPase (proton pump) signature | 583 | 601 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | Pfam | haloacid dehalogenase-like hydrolase | 463 | 740 | - | - | |
Cla08g01268 | 1089 | Gene3D | - | 464 | 763 | IPR023214 | - | |
Cla08g01268 | 1089 | Pfam | E1-E2 ATPase | 269 | 446 | - | - | |
Cla08g01268 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 643 | 653 | - | - | |
Cla08g01268 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 726 | 745 | - | - | |
Cla08g01268 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 467 | 481 | - | - | |
Cla08g01268 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 749 | 761 | - | - | |
Cla08g01268 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 317 | 331 | - | - | |
Cla08g01268 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 621 | 632 | - | - | |
Cla08g01268 | 1089 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 156 | 985 | IPR023298 | - | |
Cla08g01268 | 1089 | Pfam | Cation transporter/ATPase, N-terminus | 156 | 219 | IPR004014 | - | |
Cla08g01268 | 1089 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 172 | 944 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cla08g01268 | 1089 | SUPERFAMILY | Calcium ATPase, transduction domain A | 270 | 367 | IPR008250 | - | |
Cla08g01268 | 1089 | PANTHER | PLASMA MEMBRANE ATPASE | 155 | 1069 | - | - | |
Cla08g01268 | 1089 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 701 | 816 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 239 | 486 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g01268 | 1089 | SFLD | C1.7: P-type atpase like | 449 | 777 | - | - | |
Cla08g01268 | 1089 | CDD | P-type_ATPase_H | 172 | 979 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cla08g01268 | 1089 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 469 | 475 | IPR018303 | - | |
Cla08g01268 | 1089 | Gene3D | - | 479 | 626 | IPR023299 | GO:0000166 | |
Cla08g01268 | 1089 | Coils | Coil | 1040 | 1060 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01418 | Cla-Chr1:28677689 | Cla08g01268 | Cla-Chr8:25581049 | 0 | dispersed | |
Cla06g01342 | Cla-Chr6:26836182 | Cla08g01268 | Cla-Chr8:25581049 | 0 | dispersed | |
Cla06g01611 | Cla-Chr6:29630953 | Cla08g01268 | Cla-Chr8:25581049 | 0 | dispersed | |
Cla07g01180 | Cla-Chr7:28794418 | Cla08g01268 | Cla-Chr8:25581049 | 0 | dispersed | |
Cla08g01268 | Cla-Chr8:25581049 | Cla11g01171 | Cla-Chr11:24491447 | 0 | dispersed | |
Cla05g01798 | Cla-Chr5:29892197 | Cla08g01268 | Cla-Chr8:25581049 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01268 | K01535 | - | csv:101213505 | 1783.84 |