Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01332 ATGCCGCGCTTACTTCATGGGACGCTTCATGCCGATATATATGGAATCGACAGGCTTCAAACTGGATGTCCTATTTTCTGCGGGAAGGATAAAAGGTCGACCAAAAAGTTTCTTGCTGGAGTGAAGAGACGCATCCTTTGCCATCCCGAGGTATGTAAATTTTCTGTGGATGTAGCATTGTCTTGTGTCTTATCCTTAAACTGGGGTCTAATTTTCTTGTTTCTCATTTCTTATTTATATTCACTCAATATGGAGATTGTTGGATCTCAAATGTATGCAACAGTTGATCTTGATAAGGCCAGAGTTGGGCGGACGAGGATAGTAGATCAGCCATACGCTCCTGAATGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACATATTATATTCACAGTTAAAGATGGAGGTGTAATCGGTGCAACATTGATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATTTGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGTAAGCCTTTATATGGTCGTTCTAGAATCCATGTGAAGTTACAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATTCCAGATCCTTTCGGTGGTGTACCTTTCACATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCAGGAGGGAATTTTCATGAAGTACATAGGTGTTGGGAGGACATATTTGATGCAATTAGCAATGCGAGACACTTGATTTACATAACTGGTTGGTCTGTGTATACAGAAATAACTTTGATAAGAGACCGAGAAAGAAGACAGACAGGAGAGGATATTACTCTGGGGCAACTGCTAAAGAAGAAGGCAGACGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCTACTGAAGAGTTCAAAAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAAGGGCTCGAAGGTACATTGCGTTCTGTGTCCACGGAATCCTGACGTTGGTAGAAGTATCATTCAGGGGTTTGAGACTGCTACAATGTTTACTCATCACCAAAAAACAGTTGTGCTTGATAGTGAAATAGCTGGTGGAGGAACAGAGAAAAGAAGGATCGTGAGTTTTGTTGGTGGTATTGATCTGTGTGATGGGAGATATGATACACCGAAGCACCCTTTGTTTTCAACTCTAGATTCAATCCACTATACCGATTTTCACCAGCCTAACTTTTCAGGCTCTTCAATTAGGAAAGGCGGTCCTCGGGAACCATGGCATGACATCCATTGCTGCCTAGAAGGACCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAACAACTTGTTGATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGCCCAGTAATGGTTTTACCAGCAGACGACCCTGACACATGGAATGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTAGCTCGCTTTCCAGAGATACCTGAGGATGCATCCAAAGTAGGCCTTGTAAGTGGGAAGAATAATGTTATAGATAGGAGTATTCAAGATGCTTATATTAATGCTATTCGCCGAGCAAAAAATTTCATATACATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCTTTGCATCTTATTCCAAAGGAGATCTCACTGAAGATTGTGAGCAAGATCGAAGCTGGAGAGAGATTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTGGACATGATGTACACAGATATAGCTCAAGCCCTTCGGAAGAAGGGTCTCGATGAAAATCCTAAAGATTACCTGACATTCTTCTGCCTTGGCAATCGAGAGAAGAAGAGAACTGGAGAATATGTACCACCGGAGAAGCCAGAACCCAATTCGGATTATGCTCGGGCTCAAGAGCACCGACGTTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCCAACATCAACCAGAGGTCAATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCATCACTTGGCATCTGGTGAGCCTGCAAGAGGTCAAATCTACGGCTTCAGAGTTGCTCTATGGTACGAGCATCTCGGTCTGTTTGACAAAGTCTTCCATAACCCAGAGACTGAAGACTGCATCCAATTCGTAAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGCCATCTCCTTTCCTATCCCATTGAAGTAGGTCCCAACGGATCGGTTACGGCGCTGCCAAAGTTTGAATTTTTTCCTGACACCAAGGCTCGTGTTCTTGGGCAACTAGCCGAGTATCTACCTCCAATCCTCACCACTTGA 2547 42.17 MPRLLHGTLHADIYGIDRLQTGCPIFCGKDKRSTKKFLAGVKRRILCHPEVCKFSVDVALSCVLSLNWGLIFLFLISYLYSLNMEIVGSQMYATVDLDKARVGRTRIVDQPYAPEWNDHFRIYCAHTVSHIIFTVKDGGVIGATLIGRAYVPVEDIIKGFVYEKWVEILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGIPDPFGGVPFTFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNFHEVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRQTGEDITLGQLLKKKADEGVTVLLLVWDDRTSTEEFKRDGLMATHDQETAEYFKGSKVHCVLCPRNPDVGRSIIQGFETATMFTHHQKTVVLDSEIAGGGTEKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYTDFHQPNFSGSSIRKGGPREPWHDIHCCLEGPVAWDILYNFEQRWRKQVGNNLLIPMQKLEETITRPVMVLPADDPDTWNVQIFRSIDGGAVARFPEIPEDASKVGLVSGKNNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDENPKDYLTFFCLGNREKKRTGEYVPPEKPEPNSDYARAQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASGEPARGQIYGFRVALWYEHLGLFDKVFHNPETEDCIQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIEVGPNGSVTALPKFEFFPDTKARVLGQLAEYLPPILTT 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26184202 26193944 + ClCG08G013330.2 Cla08g01332 278987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01332 848 PANTHER PHOSPHOLIPASE D 3 848 IPR015679 -
Cla08g01332 848 Gene3D C2 domain 82 199 IPR035892 -
Cla08g01332 848 Gene3D Endonuclease Chain A 242 490 - -
Cla08g01332 848 PIRSF PLD_plant 2 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cla08g01332 848 ProSiteProfiles C2 domain profile. 52 166 IPR000008 -
Cla08g01332 848 SMART pld_4 694 721 IPR001736 GO:0003824
Cla08g01332 848 SMART pld_4 366 404 IPR001736 GO:0003824
Cla08g01332 848 Gene3D Endonuclease Chain A 507 738 - -
Cla08g01332 848 SMART C2_3c 73 165 IPR000008 -
Cla08g01332 848 Pfam C2 domain 89 168 IPR000008 -
Cla08g01332 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 86 191 IPR035892 -
Cla08g01332 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Cla08g01332 848 CDD C2_plant_PLD 1 188 - -
Cla08g01332 848 SUPERFAMILY Phospholipase D/nuclease 522 776 - -
Cla08g01332 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 366 404 IPR001736 GO:0003824
Cla08g01332 848 Pfam Phospholipase D C terminal 766 837 IPR024632 -
Cla08g01332 848 PANTHER PHOSPHOLIPASE D ALPHA 3 3 848 - -
Cla08g01332 848 SUPERFAMILY Phospholipase D/nuclease 205 482 - -
Cla08g01332 848 Pfam Phospholipase D Active site motif 366 404 IPR001736 GO:0003824
Cla08g01332 848 Pfam Phospholipase D Active site motif 695 721 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01298 Cla-Chr7:30122992 Cla08g01332 Cla-Chr8:26184202 0 dispersed
Cla08g01332 Cla-Chr8:26184202 Cla08g01396 Cla-Chr8:26830441 0 dispersed
Cla07g01209 Cla-Chr7:29089261 Cla08g01332 Cla-Chr8:26184202 0 wgd
Cla08g01332 Cla-Chr8:26184202 Cla09g00253 Cla-Chr9:2509973 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01332 K01115 - csv:101207900 1550.8