Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01369 | ATGGCAGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGATCGGAGGCAAATCCGACGCCTGGAAAATTCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAATACCGTAAGCCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTTCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAATTGGTTTGTTGTGA | 531 | 50.85 | MAGFSRALFLLTFLLFSFSEAREILIGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEDYEACNTVSPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISSAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGIGLL | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26575174 | 26575950 | + | ClCG08G013730.1 | Cla08g01369 | 279024 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01369 | 176 | CDD | OsENODL1_like | 22 | 124 | IPR041846 | - | |
Cla08g01369 | 176 | Gene3D | - | 21 | 128 | IPR008972 | - | |
Cla08g01369 | 176 | SUPERFAMILY | Cupredoxins | 21 | 125 | IPR008972 | - | |
Cla08g01369 | 176 | ProSiteProfiles | Phytocyanin domain profile. | 22 | 126 | IPR003245 | GO:0009055 | |
Cla08g01369 | 176 | PANTHER | EARLY NODULIN-LIKE PROTEIN 3 | 9 | 172 | - | - | |
Cla08g01369 | 176 | PANTHER | BLUE COPPER PROTEIN | 9 | 172 | IPR039391 | GO:0009055 | |
Cla08g01369 | 176 | Pfam | Plastocyanin-like domain | 33 | 118 | IPR003245 | GO:0009055 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g01522 | Cla-Chr5:24988691 | Cla08g01369 | Cla-Chr8:26575174 | 1.27E-30 | dispersed | |
Cla08g01369 | Cla-Chr8:26575174 | Cla11g01755 | Cla-Chr11:31149410 | 3.54E-33 | dispersed | |
Cla08g01369 | Cla-Chr8:26575174 | Cla10g00524 | Cla-Chr10:6934499 | 2.20E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01369 | - | - | csv:101210664 | 263.462 |