Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01369 ATGGCAGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGATCGGAGGCAAATCCGACGCCTGGAAAATTCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAATACCGTAAGCCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTTCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAATTGGTTTGTTGTGA 531 50.85 MAGFSRALFLLTFLLFSFSEAREILIGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEDYEACNTVSPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISSAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGIGLL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26575174 26575950 + ClCG08G013730.1 Cla08g01369 279024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01369 176 CDD OsENODL1_like 22 124 IPR041846 -
Cla08g01369 176 Gene3D - 21 128 IPR008972 -
Cla08g01369 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cla08g01369 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
Cla08g01369 176 PANTHER EARLY NODULIN-LIKE PROTEIN 3 9 172 - -
Cla08g01369 176 PANTHER BLUE COPPER PROTEIN 9 172 IPR039391 GO:0009055
Cla08g01369 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01522 Cla-Chr5:24988691 Cla08g01369 Cla-Chr8:26575174 1.27E-30 dispersed
Cla08g01369 Cla-Chr8:26575174 Cla11g01755 Cla-Chr11:31149410 3.54E-33 dispersed
Cla08g01369 Cla-Chr8:26575174 Cla10g00524 Cla-Chr10:6934499 2.20E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01369 - - csv:101210664 263.462