Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01396 ATGAACGGTCATGATGCGGAGCCGTTGGTGTACGTTCACGGCGACCTCGATTTGAAGATCATTGAGGCGCGCCGTTTGCCTAATATGGATTTGCTAACGGAACGTATTCGGCGGTTTTTTACTGTTTTTACTTCTTGTCGGAAACCGTTTTCCAAGAAGAAGGATAAGGATGATCATCAGCATCACCGGAAGATTATTACTAGTGATCCTTACGTCACTGTTTGTCTTGCTGGAGCGACGGTTGCTCGGACGCGAGTTATTTCGAACTCGCAGAACCCTGTCTGGAATGAGCACTTCAAAATCCCTCTTGCTCATCCGGTCTCGCAGGTGGAGTTTCATGTCAAGGATAACGATGTGTTTGGTGCGGATTTGATTGGTATTGCAACGGTCCCTGCGCGCAGAGTTCTTTCTGGCGAAACCATAGATGATTGGTTTCCGATTATCGGTTCGTTCGGGAAACCGCCGAAGCCGGATTCGGCGGTGCGTTTGGAAATGAAATTCACCAAGTGCGAGGAGAATCCTCTGTACCGTTATGGCATTGCGGCCGATCCCGAACATTTTGGCGTTCGGAATTGTTATTTTCCGGTACGGCATGGAGGTTCGGTAACGCTTTATCAGGACGCGCACGTTCCTGATTCCATGTTGGAGAAGATTGAATTGGAAAAGGGGAATGTGTATCAGCATGAGAATTGCTGGGAGGATATATGCCATGCAATTTTGGAGGCTCACCATTTAGTCTACATCGCCGGTTGGTCCATATATCATAAGGTGAAGCTGGTGAGAGAGCCTTCAAAGCCGTTGCCTAATGGTGGGAATTTGAACCTGGGAGAGTTGCTCAAGTACAAGTCACAGGAAGGTGTGCGAGTCTTGTTATTGGTTTGGGATGACAAGACTTCCCACAGCAAATTCTTCATTAATACGAATGGAGTGATGCAGACTCATGATGAGGAGACCCGGAAGTTTTTCAAGCACTCTTCTGTATCATGTGTGCTGTCACCCCGATATGCCAGCAGTAAGCTTAGCATTTTTAAGCAACAGGCACGCTTTATACCATGGTTCAGTTACATGTTGGTTGTTGGAACGCTTTTCACCCATCACCAGAAGTGCGTGATTGTGGATACACAAGCATCTGGAAATTACCGGAAGATAAGTTCTTTTATTGGAGGACTTGACCTTTGCGATGGTCGTTATGATACTCCTGAGCATCGGTTGTTAAAAGATCTTGACACTGTATTTGAGGATGATTATCACAATCCAACTTTTTCTGGAGGTACAAAGGGTCCTCGGCAGCCATGGCATGATTTACATTGCAAAATTGAAGGGCCTGCGGCATATGATGTGCTCACTAACTTTGAACAACGATGGCGAAAAGCCACAAAATGGTCCGAATTAGGTCAGCGGTTCAAAAGAGTATCGCATTGGCATGAAGATGCTTTAATAAAGTTGGAACGCATATCTTGGATACTTAGTCCATCTCAGTCAGTCCCCAACGATGATCCTTTGTTATGGGTTTCCAAGGAAAATGATCCTGGCAATTGGCATGTTCAGGTTTTCCGGTCCATAGATTCAGGATCTTTGAAAGGATTTCCCAAAGATGTTTTTCAAGCTGAGTTGCAGAATCTGGTTTGTGCAAAAAATTTGGTTATTGACAAAAGCATTCAAACAGCATATATTCAAGCAATAAGATCTGCCCAACACTTCATATACATTGAGAATCAGTATTTTCTTGGATCGTCATTTGCGTGGCCTTCGTACAAAGAAGCAGGTGCTGATAATCTTATTCCTATGGAATTGGCGTTGAAGATTGCTAGTAAGATAAGAGCGAATGAGAGGTTTGCTGTCTACGTTGTAATACCAATGTGGCCTGAAGGGGTTCCCACTTCTGTTTCTGTGCAAGAAATCCTATTTTGGCAGGGTCAGACAATCCAAATGATGTATGAAGTCATTGGAAGAGAGTTGAAATATAAGAATCTTGAGAACGCTCATCCCTCAGACTACCTGAACTTTTTCTGTCTTGGAAATAGGGAACCGCACGAGGACTTGACATGTTCCTCTGGTCATTCTTCCAAGAGCGAAGATGTGGTTCCAGACTCACAAAAGTTCCGTAGATTCATGATATATGTGCATGCGAAAGGAATGATTGTTGATGATGAGTATGTAATAATAGGGTCTGCAAATATAAATCAAAGATCAATGGCTGGTTCAAGGGACACTGAGATTGCCATGGGCGCATATCAACCCAGTTACACATGGGGTAAGAAGAAACGACATCCACAAGGCCAGGTTTATGGCTATAGAATGTCGCTCTGGGCTGAACATTTGGGAAACATTGACGATTGCTTCAAGGAGCCCGAAAGTTTGACTTGTGTGAAGGCAGTCAACAAGATAGCTGAAGATAACTGGAAGAAATACACCGCAACGGAATTTGTGCCATTACAAGGGCACCTCCTTAAGTACCCGATCGAGGTCAGCCAAAGTGGGAAGATAGGTCCATTGACTGGACACGAGACTTTCCCTGACTTTGGTGGTAAGTTCAATTCTCTTCACTTTCAAGCATGGGAAAGAGAGATGCATTTGTTCGAGAATGGAGCAGAAACAGAAACAAAGCCTAACCAGGTTGTCCAAGGCCGTAACCAAGGTTGTTGCTGGATAGTTGATAAGTCCGATCAGTTGATTAGAATCGGTTCAGGTATGCACAATTTTGGAGGTCCTAATCTCTCTCCATTCTTGGCAACTTCTTACTTCAGTGCTCATAAATTCATCTAA 2766 44.25 MNGHDAEPLVYVHGDLDLKIIEARRLPNMDLLTERIRRFFTVFTSCRKPFSKKKDKDDHQHHRKIITSDPYVTVCLAGATVARTRVISNSQNPVWNEHFKIPLAHPVSQVEFHVKDNDVFGADLIGIATVPARRVLSGETIDDWFPIIGSFGKPPKPDSAVRLEMKFTKCEENPLYRYGIAADPEHFGVRNCYFPVRHGGSVTLYQDAHVPDSMLEKIELEKGNVYQHENCWEDICHAILEAHHLVYIAGWSIYHKVKLVREPSKPLPNGGNLNLGELLKYKSQEGVRVLLLVWDDKTSHSKFFINTNGVMQTHDEETRKFFKHSSVSCVLSPRYASSKLSIFKQQARFIPWFSYMLVVGTLFTHHQKCVIVDTQASGNYRKISSFIGGLDLCDGRYDTPEHRLLKDLDTVFEDDYHNPTFSGGTKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSELGQRFKRVSHWHEDALIKLERISWILSPSQSVPNDDPLLWVSKENDPGNWHVQVFRSIDSGSLKGFPKDVFQAELQNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPSYKEAGADNLIPMELALKIASKIRANERFAVYVVIPMWPEGVPTSVSVQEILFWQGQTIQMMYEVIGRELKYKNLENAHPSDYLNFFCLGNREPHEDLTCSSGHSSKSEDVVPDSQKFRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGSRDTEIAMGAYQPSYTWGKKKRHPQGQVYGYRMSLWAEHLGNIDDCFKEPESLTCVKAVNKIAEDNWKKYTATEFVPLQGHLLKYPIEVSQSGKIGPLTGHETFPDFGGKFNSLHFQAWEREMHLFENGAETETKPNQVVQGRNQGCCWIVDKSDQLIRIGSGMHNFGGPNLSPFLATSYFSAHKFI 921
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 26830441 26836635 - ClCG08G014000.1 Cla08g01396 279051
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01396 921 PANTHER PHOSPHOLIPASE D 8 845 IPR015679 -
Cla08g01396 921 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Cla08g01396 921 SMART pld_4 361 396 IPR001736 GO:0003824
Cla08g01396 921 SMART pld_4 704 731 IPR001736 GO:0003824
Cla08g01396 921 PIRSF PLD_plant 1 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cla08g01396 921 SUPERFAMILY Phospholipase D/nuclease 550 789 - -
Cla08g01396 921 SUPERFAMILY Phospholipase D/nuclease 231 467 - -
Cla08g01396 921 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
Cla08g01396 921 PANTHER PHOSPHOLIPASE D 8 845 - -
Cla08g01396 921 Pfam C2 domain 14 147 IPR000008 -
Cla08g01396 921 Gene3D C2 domain 12 175 IPR035892 -
Cla08g01396 921 Pfam Phospholipase D C terminal 778 844 IPR024632 -
Cla08g01396 921 SMART C2_3c 15 144 IPR000008 -
Cla08g01396 921 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Cla08g01396 921 Gene3D Endonuclease Chain A 215 479 - -
Cla08g01396 921 CDD C2_plant_PLD 10 168 - -
Cla08g01396 921 Pfam Phospholipase D Active site motif 705 731 IPR001736 GO:0003824
Cla08g01396 921 Pfam Phospholipase D Active site motif 362 396 IPR001736 GO:0003824
Cla08g01396 921 Gene3D Endonuclease Chain A 532 750 - -
Cla08g01396 921 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 169 IPR035892 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01209 Cla-Chr7:29089261 Cla08g01396 Cla-Chr8:26830441 0 dispersed
Cla08g01332 Cla-Chr8:26184202 Cla08g01396 Cla-Chr8:26830441 0 dispersed
Cla08g01396 Cla-Chr8:26830441 Cla09g00253 Cla-Chr9:2509973 0 dispersed
Cla06g00016 Cla-Chr6:201686 Cla08g01396 Cla-Chr8:26830441 0 transposed
Cla10g00328 Cla-Chr10:4258401 Cla08g01396 Cla-Chr8:26830441 0 transposed
Cla01g02012 Cla-Chr1:34738695 Cla08g01396 Cla-Chr8:26830441 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01396 K01115 - csv:101213442 1641.71