Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01404 ATGTTTAATAATCTCATCTTCACCTTTATTCTCCTTTTTTCCTCCCTTCTTCCCTCTTTCAATGCCTTGAGCCATCGTTACTATGACCACACATGCCCTAATCTCGAGTCCATTGTTGCCCGAGAAGTCCACTTAGCCACTGCCAACGACAAGACCGTCCCTGCTGCATTGCTTCGAATGCACTTCCATGATTGTTTCATTAGAGGTTGTGATGGCTCTGTGCTTCTCGACTCCAAGGGAAAGAACACAGCCGAAAAAGATGGCCCTCCCAACATATCCCTCCATGCTTTTTATGTCATTGACAATGCCAAGAAAGCCATTGAATCTACCTGCCCTGGCGTCGTTTCTTGCGCTGATATCTTAGCCCTTGCTGCTCGAGATGCCGTTGTTTTGTCTGGAGGTCCTCATTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCTATTGAAACTAGACAATTACCAGCTCCCACATTCAACTTCTCTCTGCTCCAACAAAGCTTCTCCCAAAGGGGCCTTTCTTTACAAGATCTTGTTGCTCTTTCAGGCGGCCACACTCTTGGATTTGCTCATTGCTCGTCGTTCCAAAACCGAATCCACAACTTCAACTCGAGCCTCGACGTCGACCCGTCATTGCAGCCGGCATTTGCGGCCAGCCTCCGGAGCATATGTCCGGCGAGAAACAAGGTGAAAAATGCGGGTTCGGCCATGGATTCAACTTCCACAGTATTTGACAATGTATATTTCAAGCTTCTTCTACAAGGGCGGAGCATTTTTTCATCAGGTCAATCTTTGCTTTCAAATCCCAAAACAAAAGCTTTGGTTTCAAGATTTGCGAATGAACAACATCTCTTTGAGAAGGCTTTTGTGAAGTCAATGGTGAAGATGAGTCAGATCGCCGGCGCCGGCCAAGAAGTCCGGCTAAACTGCAGGGTGGTCAGATGA 954 46.86 MFNNLIFTFILLFSSLLPSFNALSHRYYDHTCPNLESIVAREVHLATANDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESTCPGVVSCADILALAARDAVVLSGGPHWEVPKGRKDGRISKAIETRQLPAPTFNFSLLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLQPAFAASLRSICPARNKVKNAGSAMDSTSTVFDNVYFKLLLQGRSIFSSGQSLLSNPKTKALVSRFANEQHLFEKAFVKSMVKMSQIAGAGQEVRLNCRVVR 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26939999 26941274 - ClCG08G014100.2 Cla08g01404 279059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01404 317 Gene3D Peroxidase, domain 2 158 299 - -
Cla08g01404 317 Gene3D - 26 316 - -
Cla08g01404 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PANTHER PEROXIDASE 64 8 316 - -
Cla08g01404 317 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla08g01404 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cla08g01404 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
Cla08g01404 317 PANTHER PEROXIDASE 25-RELATED 8 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01404 Cla-Chr8:26939999 Cla02g00175 Cla-Chr2:1795194 8.78E-40 dispersed
Cla04g00296 Cla-Chr4:10467542 Cla08g01404 Cla-Chr8:26939999 3.07E-92 transposed
Cla05g00838 Cla-Chr5:8305976 Cla08g01404 Cla-Chr8:26939999 1.08E-124 transposed
Cla01g02003 Cla-Chr1:34663108 Cla08g01404 Cla-Chr8:26939999 1.87E-155 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01404 K00430 - csv:101214403 565.074