Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01416 | ATGGGATTTCTACAAACATATTTTCTTTCTCCTTCTTCTGTTTTGTTTCACTCTGTGCTTTTGATCATCTTCTTTAGAGGCGTTTCTGGAGCTGGATTTACATTTGTAAATAGATGTGATTACACTGTTTGGCCGGGAATTCTTGGAAACACCCAATTGGAATCCACTGGATTCGAGCTCTCTCCGGGGGCGGAGCGTTCCTTCCACGCGCCGCCGGGTTGGTCCGGCAGATTCTGGGGTCGAACCGGCTGTTTGTTCGACCCTGCCACTGGTCAGGGCAGTTGTCAAACGGCTGATTGTGCATCAAACCAAATCGAATGCAATGGCGCCGGAGCTACCCCGCCGGCGACCCTAGCCGAGTTTACGATCGGCGGTGGTGCCGGCGCGCAGGACTTTTACGATGTCAGCTTGGTCGACGGCTACAACATTCCGATGGTGGTGGATGCCACTGGTGGGAGTGGCGCGTGTCAGTCGACTGGGTGCGCGGCGGAGCTGAGCCGGCGGTGCCCTGCGGAACTACGGGCTGGCGAGGGAAAGGCGTGTAGAAGCGCGTGTGAAGCGTTTGGGAACCCGGAATACTGCTGCAGCGGCGCGTATAACTCACCCGCTGCCTGTAAGCCGTCGATGTACTCGGAAATGTTCAAATCGGCTTGCCCGAAATCGTATAGCTACGCCTTTGATGACGCAACAAGCACTTTTACTTGTAGTGGAGCAGATTATACCATTACATTCTGCCCTTCATCAACAAGCCAAAAATCGGAAAGAGATCCGTCGAGCCGAGGTGATGGACCGTTGGTGTCGTTCGACAGTTCATGGCTGCCGGACTTTATTACCGGAGAAGGATCATCCAAAACAATGTTTTTGTCTTCAACTTTGAATTCAACATTGTTTCTTCTTATTTTTTTCATTTTCTTTTTTCATTAG | 924 | 51.41 | MGFLQTYFLSPSSVLFHSVLLIIFFRGVSGAGFTFVNRCDYTVWPGILGNTQLESTGFELSPGAERSFHAPPGWSGRFWGRTGCLFDPATGQGSCQTADCASNQIECNGAGATPPATLAEFTIGGGAGAQDFYDVSLVDGYNIPMVVDATGGSGACQSTGCAAELSRRCPAELRAGEGKACRSACEAFGNPEYCCSGAYNSPAACKPSMYSEMFKSACPKSYSYAFDDATSTFTCSGADYTITFCPSSTSQKSERDPSSRGDGPLVSFDSSWLPDFITGEGSSKTMFLSSTLNSTLFLLIFFIFFFH | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 27028798 | 27030501 | - | ClCG08G014230.2 | Cla08g01416 | 279071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01416 | 307 | PANTHER | PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN | 14 | 263 | - | - | |
Cla08g01416 | 307 | CDD | TLP-PA | 33 | 245 | - | - | |
Cla08g01416 | 307 | ProSiteProfiles | Thaumatin family profile. | 30 | 246 | IPR001938 | - | |
Cla08g01416 | 307 | SUPERFAMILY | Osmotin, thaumatin-like protein | 33 | 247 | IPR037176 | - | |
Cla08g01416 | 307 | Gene3D | Thaumatin | 31 | 246 | IPR037176 | - | |
Cla08g01416 | 307 | PANTHER | OS03G0233200 PROTEIN | 14 | 263 | IPR001938 | - | |
Cla08g01416 | 307 | SMART | tha2 | 33 | 246 | IPR001938 | - | |
Cla08g01416 | 307 | Pfam | Thaumatin family | 37 | 246 | IPR001938 | - | |
Cla08g01416 | 307 | PRINTS | Pathogenesis-related protein signature | 32 | 44 | IPR001938 | - | |
Cla08g01416 | 307 | PRINTS | Pathogenesis-related protein signature | 56 | 65 | IPR001938 | - | |
Cla08g01416 | 307 | PRINTS | Pathogenesis-related protein signature | 77 | 88 | IPR001938 | - | |
Cla08g01416 | 307 | PRINTS | Pathogenesis-related protein signature | 131 | 147 | IPR001938 | - | |
Cla08g01416 | 307 | PRINTS | Pathogenesis-related protein signature | 236 | 245 | IPR001938 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla05g01863 | Cla08g01416 | CCT | |
Cla05g01863 | Cla08g01416 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01416 | Cla-Chr8:27028798 | Cla10g00071 | Cla-Chr10:737763 | 7.22E-125 | dispersed | |
Cla08g01416 | Cla-Chr8:27028798 | Cla08g01417 | Cla-Chr8:27043614 | 2.60E-93 | tandem | |
Cla01g01986 | Cla-Chr1:34501575 | Cla08g01416 | Cla-Chr8:27028798 | 2.55E-77 | wgd | |
Cla05g01863 | Cla-Chr5:30508879 | Cla08g01416 | Cla-Chr8:27028798 | 8.97E-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01416 | - | - | csv:101204331 | 564.688 |