Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01448 | ATGGATCTGCTGCGCTCGGAGCCAATGCAATTGGTGCAGCTGATCATTCCTAATGAATCGGCGCACAGGACGATTTCTTACCTCGGCGACCTCGGTCTCTTCCAATTCAACAATGTGAGTCACATTGCATTGGAAATCATCTTCTGGTTTTCGATCTTCTTGTCTATCATGTTAGATCACCTTGGTTATCATGTTAGGTTCCGTTTCCTTGTTCGTAATTGTATTGTGATTCTGAGTTTACTACTTGACTTCAATTTCGTAAAGGCTAATGTAGGTTCAGTTTCTTTGTTTGTAATCGCCAATGCCATTGTAATTCTGAGTTTACTACTTGAATTTAATTTCATAAAGGCTAATCTCAATGCATCTAGAAGCCCATTCCAGCGGACGTATGCTGCCCAGATTAAAAGATGTGGGGAAATGGCTCGGAAGCTACGTTTTTTCAGGGAGCAAATGACAAAGGCTGGTATACTGCCGTCATCAAATTCTCTAGGGACTCCTGATTTTGATCTGGATAATTTGGAGGTTAAACTTGGAGAATTTGAGGTAGAGTTGTTAGAGATAAATGACAACAACGAAAAGTTACAACGCAATTATAGTGAGCTATTGGAATACAAGCTTGTACTCCAGAAGGTTGGTGAGTTTTTCCATCTTGCTCAAAGCATAGCTGCAGCTCAGCAAAGAGAACTGGAAGTGCAGCAAAACGGTGAAGGATCCATCGACACTCCCTTATTATTGGAACAAGAAATGACAACCGATTCAACGAAACAAGTTAAACTAGGATATATCAGTGGTCTAGTTCCGAGAGAAAAGGCAATGACTTTTGAGAGGATTTTGTTTCGTTCAACTAGGGGCAATCTGTATCTGAGACAAGCTGTGGTTGATGGTTCCGTCACTGATCCTGTAACTGCGGAGAAGGTCGAGAAAAATGTGTTTGTCATATTTTATTCTGGAGAGAGAGCAAAGGATAAAATTCTGAAAATATGCGACGCTTTTGATGCAAACCGTTACCCATTCACTGATGACTTGAGCAAACAAATTCAGATGATTACAGAGGTGTCTGGAAAACTCTCTGAATTGAAGACTACCATTGATATGGGGCAACTGCACCGAAGTAAACTCTTGCAGACGATTAGCCATCAGTATGAGCTGTGGAATCTTCTGGTAAAGAAGGAAAAATCTGTTTACCACACTTTGAATATGCTCAGTGTTGATGTTACAAAGAAATGCCTTGTAGGTGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAAGTGTGATGCAGATGGCAACCCTTGACAGCAACTCACAAATCGAGGCTATCTTTCATGTTTTGCAAACAAAGGAAGCACCACCAACATATTTCCGCACAAACAAATTTACTTCTTCGTTTCAAGAAATCGTGGATGCATATGGGGTTGCTAAGTATCAGGAAGCAAATCCTGGAGTCTACACTATTGTCACCTTCCCTTTCCTGTTTGCTGTAATGTTTGGCGATTGGGGCCATGGAATATGCTTGTTGCTGGCAACATTATATTTTATAATAAGGGAGAAGAAGTTTTCCAGCCAGAAACTTGGAGATATCATTGAAATGACTTTTGGAGGTCGTTATGTTATCATGATGATGGCACTTTTTTCGATCTACACAGGACTTATCTATAATGAATTCTTTTCTGTCCCATTTGAACTGTTTGGGCCTTCTGCATACGGTTGTCGTGATACTTCATGCAGGGATGCTACTACCATTGGTTTAATAAAGGTTCGTGATACATATCCATTTGGTGTGGATCCTAAGTGGCATGGCACGCGAAGTGAGTTACCTTTTCTCAACTCTTTGAAGATGAAGATGTCTATCCTAGTGGGAGTAGCTCAAATGAATCTAGGAATTATACTGAGCTACTTCAATGCGAAATTCTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATATTCTTGAACAGCTTATTTGGTTACCTCTCACTTCTCATAATTGTAAAATGGTACTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCTACTGATGATCTAGGTGAAAATCAGCTTTTCGAAGGACAGAAGTTTCTTCAGAGGCACCAAGGTCAATCCTACTCCGTACTTCACAACACAGATGAGAATCATGAAATGGAACAACACCACGGTTCCCGCGGCCATGAGTTTGATTTCAGTGAGGTTTTTGTACACCAACTTATACATACCATAGAGTTTGTTCTTGGTGCAGTCTCTAACACAGCATCCTATCTTCGTCTATGGGCCCTCAGTCTAGCGCATTCGGAGTTGTCGAGTGTATTCTACGACAAGGTTTTACTCCTAGCTTGGGGGTTCAATAGTTTGATCATCCGAATATTAGGAATAGCCGTTTTCATTTGTGCAACTGTCGGAGTTTTACTAATTATGGAAACTCTAAGCGCATTCCTACACGCCTTGAGGCTCCATTGGGTGGAGTTTCAGAACAAATTCTACGCAGGAGATGGATTCAAATTTTCTCCCTTCTCATTTTCGTTGCTTCGGGATGAGGATGAGTAG | 2580 | 40.78 | MDLLRSEPMQLVQLIIPNESAHRTISYLGDLGLFQFNNVSHIALEIIFWFSIFLSIMLDHLGYHVRFRFLVRNCIVILSLLLDFNFVKANVGSVSLFVIANAIVILSLLLEFNFIKANLNASRSPFQRTYAAQIKRCGEMARKLRFFREQMTKAGILPSSNSLGTPDFDLDNLEVKLGEFEVELLEINDNNEKLQRNYSELLEYKLVLQKVGEFFHLAQSIAAAQQRELEVQQNGEGSIDTPLLLEQEMTTDSTKQVKLGYISGLVPREKAMTFERILFRSTRGNLYLRQAVVDGSVTDPVTAEKVEKNVFVIFYSGERAKDKILKICDAFDANRYPFTDDLSKQIQMITEVSGKLSELKTTIDMGQLHRSKLLQTISHQYELWNLLVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATNQIQSVMQMATLDSNSQIEAIFHVLQTKEAPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDTSCRDATTIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILVGVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWYSGSQADLYHVMIYMFLSPTDDLGENQLFEGQKFLQRHQGQSYSVLHNTDENHEMEQHHGSRGHEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNSLIIRILGIAVFICATVGVLLIMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSLLRDEDE | 859 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 27365651 | 27376157 | + | ClCG08G014590.2 | Cla08g01448 | 279103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01448 | 859 | PIRSF | ATP6V0A1 | 1 | 45 | IPR026028 | GO:0000220|GO:0046961 | |
Cla08g01448 | 859 | PIRSF | ATP6V0A1 | 707 | 859 | IPR026028 | GO:0000220|GO:0046961 | |
Cla08g01448 | 859 | PIRSF | ATP6V0A1 | 90 | 711 | IPR026028 | GO:0000220|GO:0046961 | |
Cla08g01448 | 859 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT A | 1 | 39 | - | - | |
Cla08g01448 | 859 | Coils | Coil | 170 | 204 | - | - | |
Cla08g01448 | 859 | PANTHER | VACUOLAR PROTON ATPASES | 111 | 708 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cla08g01448 | 859 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT A | 708 | 859 | - | - | |
Cla08g01448 | 859 | Pfam | V-type ATPase 116kDa subunit family | 717 | 851 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cla08g01448 | 859 | Pfam | V-type ATPase 116kDa subunit family | 118 | 709 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cla08g01448 | 859 | PANTHER | VACUOLAR PROTON ATPASES | 1 | 39 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 | |
Cla08g01448 | 859 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT A | 111 | 708 | - | - | |
Cla08g01448 | 859 | PANTHER | VACUOLAR PROTON ATPASES | 708 | 859 | IPR002490 | GO:0033179|GO:0046961|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g02031 | Cla-Chr2:35337462 | Cla08g01448 | Cla-Chr8:27365651 | 3.45E-09 | dispersed | |
Cla02g00497 | Cla-Chr2:4907715 | Cla08g01448 | Cla-Chr8:27365651 | 1.08E-12 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01448 | K02154 | - | csv:101209817 | 1366.29 |