Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01451 ATGGGGGGTTGTCTTTTCCAAGCTGATAAAAAGAAAAGAAAAAGGAAGGCAGCAATGTGGAGTTCATTAGAATGTGGGAGACAACCCCAAAACAAAATTCAACCTTACAAACAGTATAAAGAGACCCCATCATCTCTTTTATTCCACAATGGGACCCTCCCCAAGTCTTTCCTCTACCCATATTTATACCTCTTCAACCTTCTCTTCCTTCCACCATCTTCTTCTTCTTTCTTTCTTTCTTTCTCCTCTTCCTCCTCCTTAAGCTCGCCATCAATGGCGGACGCAGGCTCCGTCTCCCACAAGAGAATGTCGTGTTCTATCCCCGAGAGGTTCCAGCTCCATGCGGCCATGTTGGCCTTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCTCTCAACATGGGCATCAGTAAACTTGTCTTCCCTGTCTACCGAAACGTCATCGCTTTACTCCTCCTCCTCCCCTTCGCATATTTCATCGAAAAGAAAGATAGGCCTGCACTCACTGTCAACTTTGTCCTTCAGTTCTTCCTACTCGCTCTTGTTGGAATTACAGCCAATCAAGGGTTTTATTTGTTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAAAATTCTGTCCCTGCCATTACTTTCCTCATGGCTGCACTTCTCAGGATTGAGCAAGTGCGACTGAACCGAAAAGATGGGATAGCGAAAGTGATGGGTACAATATGTTGCGTAGCCGGAGCGACGGTGATCACGTTATACAAAGGGCCCACCATCTACAGCCCAGCAACGACAACGGTGATGATACAAGAGACAGCAGAGACGGCGGGGACGATGCTGATGGGGCCAGGAATGTTCCCGTCGTTAGGTGACGCAAAGGGGAAAAGCTGGACGTTAGGGTGCGTTTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTAGTCCTACAAGCACCGGTGCTGAAAAAATATCCGGCTCGCCTCTCAGTTACCTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCCTCATCATCGCCCTCGCCTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCCGGCGCTGAAGCCTTTAGCATCGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCGTTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCGGTCTTCGTTGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTATTTGGGAGGGATCATAGGAGCGGTGCTGATTATATCAGGACTCTACCTTGTGCTATGGGGAAAGAGCGAAGAAAAGAAGATCTTATTGGAAAGAGCTGTGATCCAGTCCGCCCCGGACCACGGCAGCAGCAGAACAAGTAGCCACGTCAAGCCGTCCATTACCCAGCCACTTCTCCATCCTACGGCTGACAATGTTTGA 1461 50.03 MGGCLFQADKKKRKRKAAMWSSLECGRQPQNKIQPYKQYKETPSSLLFHNGTLPKSFLYPYLYLFNLLFLPPSSSSFFLSFSSSSSLSSPSMADAGSVSHKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTVNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATTTVMIQETAETAGTMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIALAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKILLERAVIQSAPDHGSSRTSSHVKPSITQPLLHPTADNV 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27419066 27423871 + ClCG08G014630.2 Cla08g01451 279106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01451 486 MobiDBLite consensus disorder prediction 459 486 - -
Cla08g01451 486 PANTHER WAT1-RELATED PROTEIN 103 464 IPR030184 GO:0016021|GO:0022857
Cla08g01451 486 PANTHER WAT1-RELATED PROTEIN 103 464 - -
Cla08g01451 486 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 257 - -
Cla08g01451 486 SUPERFAMILY Multidrug resistance efflux transporter EmrE 343 443 - -
Cla08g01451 486 Pfam EamA-like transporter family 117 254 IPR000620 GO:0016020|GO:0016021
Cla08g01451 486 Pfam EamA-like transporter family 301 439 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla05g01903 Cla08g01451 CCT
Cla05g01903 Cla08g01451 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01451 Cla-Chr8:27419066 Cla11g01284 Cla-Chr11:26371717 8.48E-77 dispersed
Cla01g00129 Cla-Chr1:1228612 Cla08g01451 Cla-Chr8:27419066 1.24E-69 transposed
Cla06g01441 Cla-Chr6:27986719 Cla08g01451 Cla-Chr8:27419066 1.29E-141 transposed
Cla11g01561 Cla-Chr11:29331612 Cla08g01451 Cla-Chr8:27419066 4.89E-75 transposed
Cla05g01903 Cla-Chr5:30884937 Cla08g01451 Cla-Chr8:27419066 1.74E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01451 - - csv:101210562 734.947