Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01463 ATGGACATGTTCATAAAATCCACCAGATATTTCTCCATCGACATCAGTGTAAGAAAATGTCAGCAGAAGAAAATGGGTCCCATCAAGAAAGAGAGATTAAAGAAGAAGAAGAAGAAGAAACAGAAGAGGGAACAAGTGGTGATTGATCAGTGTTTCTTGTCTGTTCTAATGCTGTACCTTATATCTGTTTGCCTTTTGTTGAGCTTCGTTATAGCTGATTATAGTTACATCAACGTGTTCTTGATGGGAATGGCGACCCCTGTAGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAACATTACTTTTCAATGTGGCAGACATTGTTTGAGATTGATACTAAATATGTACCTATCAAGCCGATTGGTCGAGGGGCATATGGTATTGTGTGTTCTTCTGTGAACAGGGAAACAAATGAGAAAGTTGCGATAAAGAGGATACATAATGCGTTTGAGAATCGTATTGATGCGCTCCGGACTTTGCGCGAATTGAAACTCCTTAGGCATCTTCGCCACGAAAATGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGTTTCAAAGATGTTTATTTGGTTTATGAACTGATGGATACTGATCTGCATCAGATTATTAAGTCTTCTCAAACTCTTACAAACGACCACTGCCAATATTTCCTCTTTCAGTTGCTCCGAGGCCTAAAGTATCTGCATTCTGCGAACATCCTACATCGGGACTTGAAGCCAGGGAACCTCCTTGTCAATGCAAATTGTGATCTTAAGATATGTGATTTTGGGTTAGCGCGTACGAGCAATGGGAAGAATCAATTTATGACAGAGTATGTTGTAACTCGCTGGTATCGAGCCCCAGAACTGCTGCTCTGCTGCGAGAATTACGGGACGTCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCCGAACTTCTCGGTAGGAAACCTATCTTCCCCGGTACAGAATGTCTGAATCAACTCAAATTGATAATTAACTTACTGGGTAGCCAGAGAGAGGAAGATCTTGAGTTCATAGACAATCCAAAGGCAAGAAGGTATATAAAATCCCTTCCATACTCTCCTGGGGCTCCTCTTTCCCGTCTTTATCCAAATGCTCATCCTCTTGCAATTGATCTCCTACAAAAGATGCTCGTCTTTGACCCATCAAAGAGGATTAGTGTAACTGAGGCATTGCAACATCCTTACATGTCTCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTGCCGATTGATCTCGACATAGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCCGAGGATCTGGAAGAACACGCAGAAATGACATGTTTCCACCCCGAACATACTACAAGTAGTACTGCAGTGTATTCTTGA 1410 41.84 MDMFIKSTRYFSIDISVRKCQQKKMGPIKKERLKKKKKKKQKREQVVIDQCFLSVLMLYLISVCLLLSFVIADYSYINVFLMGMATPVEPPNGVRSQGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINLLGSQREEDLEFIDNPKARRYIKSLPYSPGAPLSRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSNPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEDLEEHAEMTCFHPEHTTSSTAVYS 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27534927 27538762 - ClCG08G014770.2 Cla08g01463 279118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01463 469 Pfam Protein kinase domain 116 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01463 469 ProSitePatterns MAP kinase signature. 150 253 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla08g01463 469 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 94 449 - -
Cla08g01463 469 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Cla08g01463 469 Gene3D Phosphorylase Kinase; domain 1 102 438 - -
Cla08g01463 469 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 94 449 - -
Cla08g01463 469 SUPERFAMILY Protein kinase-like (PK-like) 107 409 IPR011009 -
Cla08g01463 469 CDD STKc_TEY_MAPK 109 444 - -
Cla08g01463 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Cla08g01463 469 ProSiteProfiles Protein kinase domain profile. 115 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01463 469 Gene3D Transferase(Phosphotransferase) domain 1 199 428 - -
Cla08g01463 469 SMART serkin_6 115 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00825 Cla-Chr7:22897719 Cla08g01463 Cla-Chr8:27534927 0 dispersed
Cla08g01021 Cla-Chr8:22915567 Cla08g01463 Cla-Chr8:27534927 1.88E-141 dispersed
Cla09g02179 Cla-Chr9:39428202 Cla08g01463 Cla-Chr8:27534927 1.40E-111 dispersed
Cla08g01463 Cla-Chr8:27534927 Cla06g00323 Cla-Chr6:4131335 2.21E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80759 PF00069 Pkinase 4.20E-71 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01463 K20535 - csv:101213478 764.222