Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01468 ATGCCTTTCCTCTGCTTTTGGTGCTTTGCCGCCGCTGCTCTCTCAATCGTCGCCGTTTTTCGATTTTATCTGAAGAATAAGCCGCCGCGCTCGCGGAGTTCGCATTCTTCTCCTCCTGGAAGCAGAGGTTTGCCTCTCATTGGAGAGACGCTCCAGTTCATGGCCGCCGTCAACTGCAGCAACGGCGTTTATGATTTCGTCACAACCCGCTGCCTCCGGTACGGAGGATGCTTTAAGACTCGAATATTTGGAGAGACGCATGTGTTTGTTTCGAGCAACGAATCGGCGAAGCTTATACTCAATGACGGCGGAGGCAGGTTCACTAAGAAGTATATAAAGTCCATTGCTGAGCTAGTCGGCCATCAAAGTTTGCTTTGTGCTTCACATTTGCACCACAAATTCTTACGTAGTCGTCTCATCAATCTTTTCTCCTCTTGTTTTTTGGCCTCTTTTGTTATGCAATTCGATCAACAAATCGTTTCGACGTTTCGATGTTGGAATACCGGTTCCACCATTGTCCTCCTCAACGAAGCCCTCAAGATAACATGCAAAGCAATGTGCAAGATGCTGATAAGCTTAGAAAAGGAAAACGAAGTAGAGGCATTCCAGAAAGAGGTTGGTTATGTATGTGAAGCTATGCTTGCATTCCCATGGAGACTTCCAGGGACAAGATTCCACAAAGGCCTCAAGGCAAGAAGAAGAATCATAAAAATACTTGAAAGTATGATTCAAGAGAGACGACAATCAGAGCCTCAGCATGGAGATTTCTTACAACGGCTGTTGACAGAGGAGGACGGTGGAGAACCGCTATCAGATGCAGAGATTGGAGATAATATATTGACTATGTTGATTGCTGGACAGGATACCACGGCGAGTGCCATCACTTGGATGATGAAGTTCTTACATGAGAATCAAGATGTACTTCTAAATCTTAAGGAAGAACAATTCAGAATATTGGGCAAAAAACAAGATCATGGGAGTTGTTTCCTTACTTTGGAGGATCTAGGCAACATGCCTTATGCTGCCAAGGTAGTAAAAGAATCATTGAGGTTAGCATCTATTGTGCCATGGTTCCCAAGACTAATCCTTCACGACACTGAAATGGAAGGTTACAAAATCAAGAAAGGTTGGAATGTTAACATTGATGTGAGATCACTACATTCGGATCCTTCTCTCTATAAAGATCCTATCAAGTTTAATCCATCCAGGTTTGATGAAGAAGCAAAGCCCTTTAGCTTTCTAGCTTTTGGGATGGGAGGGAGGCAATGTCTAGGGATGAATCTAGCCAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGGTGACTTATTTCAGATGGAAGGTAATCGACTCTGACTCTAGCATTGAAAAGTGGGCCCTTTTTACCAAATTAAAGAGTGGTTGTCCAATTCTCATCACACGTATTGAATCTTAA 1434 43.65 MPFLCFWCFAAAALSIVAVFRFYLKNKPPRSRSSHSSPPGSRGLPLIGETLQFMAAVNCSNGVYDFVTTRCLRYGGCFKTRIFGETHVFVSSNESAKLILNDGGGRFTKKYIKSIAELVGHQSLLCASHLHHKFLRSRLINLFSSCFLASFVMQFDQQIVSTFRCWNTGSTIVLLNEALKITCKAMCKMLISLEKENEVEAFQKEVGYVCEAMLAFPWRLPGTRFHKGLKARRRIIKILESMIQERRQSEPQHGDFLQRLLTEEDGGEPLSDAEIGDNILTMLIAGQDTTASAITWMMKFLHENQDVLLNLKEEQFRILGKKQDHGSCFLTLEDLGNMPYAAKVVKESLRLASIVPWFPRLILHDTEMEGYKIKKGWNVNIDVRSLHSDPSLYKDPIKFNPSRFDEEAKPFSFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTYFRWKVIDSDSSIEKWALFTKLKSGCPILITRIES 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27594042 27599242 + ClCG08G014820.2 Cla08g01468 279123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01468 477 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 Gene3D Cytochrome P450 27 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PANTHER CYTOCHROME P450 26 19 473 - -
Cla08g01468 477 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01468 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Cla08g01468 477 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 19 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01468 Cla-Chr8:27594042 Cla09g00905 Cla-Chr9:9390395 1.18E-94 dispersed
Cla01g01935 Cla-Chr1:34028046 Cla08g01468 Cla-Chr8:27594042 9.18E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01468 - - csv:101215324 768.074