Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla08g01510 | ATGACCTCCGACGGCGCCACTTCTGCCTCCACTTGCCGGCGGAAGCCGTCTTGGAGGGAGCGGGAGAATAATCGGACCAGAGAGCGTCGGAGGAGAGCCATCGCCGCTAAGATTTACTCTGGCCTTAGGGCTCAGGGAAACTTCAATTTGCCTAAACACTGTGACAACAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACCGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCCAGTCCTATGGGATCCTACCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTCTCGACGCCAACAATCCGTCGAACCTCATTCCTTATCTTCGCCAAGCGATTCCCATATCGCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTAACCCCTCCCCTTTCATCCCCAGCCTCGAGGACTCCGCAGCCATTCCCCAATTGGGAAGTCACTGCTAAAGAATCCTTATCCTCCTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACTCGACCTCAGCTCCATACTCCCGCCACGATCCACAAATTCGACGAATCTGAATCATCCACCAATGAGTCCAGTCAATGGGCACTTCTCCGTGCCTATGCACCTTCTGCATCGACAATGCCAACATCTCCCACGTTCAACCTTGTGAAACCTGCTGACCAACATGCTCTACACGATGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAGATTCATGATGTCGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGGTAAGGCTCGAAGCTAA | 936 | 51.82 | MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSRLDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVTAKESLSSLNYPFFAVSAPASPTRPQLHTPATIHKFDESESSTNESSQWALLRAYAPSASTMPTSPTFNLVKPADQHALHDGFIKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSGKARS | 311 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 27895970 | 27898151 | - | ClCG08G015300.1 | Cla08g01510 | 279165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla08g01510 | 311 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - | |
| Cla08g01510 | 311 | MobiDBLite | consensus disorder prediction | 93 | 132 | - | - | |
| Cla08g01510 | 311 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 310 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
| Cla08g01510 | 311 | PANTHER | PROTEIN BRASSINAZOLE-RESISTANT 1 | 1 | 310 | - | - | |
| Cla08g01510 | 311 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Cla08g01510 | 311 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 13 | 136 | IPR008540 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla08g01510 | Cla-Chr8:27895970 | Cla06g00350 | Cla-Chr6:4432228 | 7.78E-15 | dispersed | |
| Cla03g00693 | Cla-Chr3:8378055 | Cla08g01510 | Cla-Chr8:27895970 | 2.83E-42 | transposed | |
| Cla07g00969 | Cla-Chr7:25883743 | Cla08g01510 | Cla-Chr8:27895970 | 1.73E-27 | transposed | |
| Cla01g01882 | Cla-Chr1:33622507 | Cla08g01510 | Cla-Chr8:27895970 | 2.31E-80 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 61608 | PF05687 | BES1_N | 2.80E-62 | No_clan | Cla | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla08g01510 | K14503 | - | csv:101219853 | 533.487 |