Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01571 ATGGCTCCAATTTTTTTACTCATTTCCATCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATTTTTCTTCCAAATTCATAACAACAATAAGTTTCCTAAGAAGAAACTCCCTCCTGGCTCAATGGGTTGGCCTCTAATTGGCGAGACCTTTCATTTTTATTCTCAAGATCCAACCTCCTTCTTTCTTGGAAAACAAAAAAGATATGGGGAGATATTCAAGACCCACATTCATGGATGTCCGTGTGTGATGTTAGCGACTCCCGAGGCGGCTCGGTTCGTGCTAGTGACACAGGCTCATCTCTTCAAACCTACATATCCACAAAGTAAAGAGCGATTAATTGGGCCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGTTTGCGTAAGCTAATCCAAAGCTCTCTGTCACCGGACCCTGTTCGAGCCTTAGTCCCTGACATCCACGCCCTAGCCATCTCTGCATTGCCCTCATGGCTCAATGGCCATCTCATTAACACTTTCCATCAAATGAAGAAGACAAAAACAGAGCTTTCAATAAGTTTTGTGCTCTTAATTGAATCAAATGGGGACCAATTATTCCTTATCAATTGTTTAATTTTAGTGTGTGTATATATATATATTTCTTTTTTTCTTTTTTTCCTCTCCTTTCTCTCGCTGACTTTCAAAGCCTTTGTTTGTTGTCGTTGTCTCTTTTTTCTTCACTCTCCAAAGTTCTCTTTTGAAGTGGGGATTTTGGCAATTTTCGGGCATTTGGAAGACACCAATTACAGAGAGGAACTAATGAAAAACTATTCCATAGTGAACAAAGGCTATAATTCTTTCCCCACCAACATTCCCGGAACGCTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGTATAATCTCAGAGAAAAGGGAGAAAAGAAAAGAATTAGGGGAGAAGAATCTATTAGCGTGTTTGCTAAAATGGAGAGATGAAAATGGAGAAACTTTAAGTGATGAACAGATCGCCGACAACATCATCGGAGTTCTGTTTGCTGCTCAGGACACGACGGCCAGTGTTCTCACTTGGGTTGTTAAATATCTACATGATAACCACAAAGTTCTAGAAGCTGTCAAGGTACGTCACTGCCGACTTTCCGATGTGCTGCAAATATTTCATTTAATTATATATGTTGAATTAAAAGGTTTGAGGATACGTGGATACCCTGAAGGAGAGAGAATAAAACATTTGAATGTCGTGGATTTTTCTTTTTCTTGTTATGCAGTTAATGTAGAAGTGGAACAAAAGGCAATTGAAGAAGGCATTAATGAAGGGAGCCGACCAATGAGCTGGGCTCAGACACGAAACATGCCCTTTACCAACAAGGTAGCACTTAGGAGCAGGACGGATAAATTCAACCATGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGAGAAGCTGTGGCAGATGTTGAATATAAAGGTAAGATAGTTGCTCCAAGACCCAATACGTTCATGCCATTTGGCAGTGGGGTCCATGCCTGCCCAGGAAATGACCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTAGTCACCAAATTCAGGTGGGAATTGGCAGGACAGAGAGATGGGATTCTGCATGGGCCTTTTCCAGTGCCTATGAATGGGCTTCCCATTAGAGTCTGGAGATTATCCACTTGA 1722 41.0 MAPIFLLISIFLLLLLLLLLLLLFFFQIHNNNKFPKKKLPPGSMGWPLIGETFHFYSQDPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPDIHALAISALPSWLNGHLINTFHQMKKTKTELSISFVLLIESNGDQLFLINCLILVCVYIYISFFLFFLSFLSLTFKAFVCCRCLFFLHSPKFSFEVGILAIFGHLEDTNYREELMKNYSIVNKGYNSFPTNIPGTLYKKALKARKRLGEIISCIISEKREKRKELGEKNLLACLLKWRDENGETLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNHKVLEAVKVRHCRLSDVLQIFHLIIYVELKGLRIRGYPEGERIKHLNVVDFSFSCYAVNVEVEQKAIEEGINEGSRPMSWAQTRNMPFTNKVALRSRTDKFNHVVLESLRMASIISFTFREAVADVEYKGKIVAPRPNTFMPFGSGVHACPGNDLAKLEILIMIHHLVTKFRWELAGQRDGILHGPFPVPMNGLPIRVWRLST 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28354854 28360081 - ClCG08G015960.2 Cla08g01571 279226

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01571 573 Gene3D Cytochrome P450 504 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Gene3D Cytochrome P450 233 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Gene3D Cytochrome P450 28 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 340 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 510 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS E-class P450 group I signature 520 543 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 SUPERFAMILY Cytochrome P450 34 569 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 513 522 IPR017972 GO:0005506|GO:0016705
Cla08g01571 573 PRINTS P450 superfamily signature 520 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS P450 superfamily signature 351 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PRINTS P450 superfamily signature 511 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Pfam Cytochrome P450 40 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Pfam Cytochrome P450 275 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 Pfam Cytochrome P450 507 549 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 507 569 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 429 503 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 240 382 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 15 182 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 26 507 569 - -
Cla08g01571 573 Gene3D Cytochrome P450 417 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 15 182 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 429 503 - -
Cla08g01571 573 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 240 382 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01571 K09843 CYP707A; (+)-abscisic acid 8'-hydroxylase [EC:1.14.14.137] - egr:104453198 402.134
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cla05g02039 Cla08g01571 CCT
Cla05g02039 Cla08g01571 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01055 Cla-Chr7:27115215 Cla08g01571 Cla-Chr8:28354854 4.08E-101 dispersed
Cla08g01571 Cla-Chr8:28354854 Cla06g01400 Cla-Chr6:27533301 5.38E-42 dispersed
Cla02g00599 Cla-Chr2:6511683 Cla08g01571 Cla-Chr8:28354854 2.18E-55 wgd
Cla05g02039 Cla-Chr5:32102232 Cla08g01571 Cla-Chr8:28354854 3.38E-67 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g765 Blo01g01531 . . . . . . . Cmo05g00185 . Cma01g01840 . Car01g01434 . Sed05g2586 . . Bhi04g00352 Tan02g0908 Cmetu01g0276 . Hepe08g1280 . Lcy13g2072 Cla08g01571 Cam08g2068 Cec08g1645 Cco08g1779 Clacu08g1754 . Cre08g1540 . . . . Lsi04g01563 Csa04g02406 . Cme03g02046 . . . . . . Bma01g00684 . Sed13g1743 Cmo01g01899 . . Cma05g00186 Car05g00156 . Cpe11g00152 Cpe02g00180 Bhi09g03328 Tan01g4795 Cmetu03g1699 . Hepe01g1760 Mch11g0286 . Cla05g02039 . Cec05g2206 Cco05g2251 Clacu05g2182 . Cre05g2177 Lsi08g01473 . Chy07g00130 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000720 1 3 3 2 2 3 4 3 3 2 3 3 3 3 3 3 3 2 4 3 3 3 3 3 3 3 3 4 13 3 97