Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01575 | ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGAGGAGGCGGAAGACCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGCATGGGGAGTATAGGCAAGGATTTTGGGTCGATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACGATGGCATCTTCTGCTGCTGCTGTTGATAAAGAAGGGGCTGGTAGTGTTGGTCGTAGTGGTGGGTATTTGCAGAGACAGGGCTCCTTGACGCTGCCTCGGACACTCAGCCAGAAGAAGGTGGATGAGGTATGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGGCTACTGTTGCTTCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAGGATACTCAGGTGACTGCAAACCCCAACAATGGAGGGTTCTTTGGCAATAACACTGGTTTTGGAATTGGTTTTCAGCGGCAGGCTAAAGTTCCTGAGAATAATAATCATATTCCAATTCAATCGTCGAACTTATCGCTGAATGTCAATGGAGTCAGAACACATCAGCCGCAGCCAATTTTTCCAAAGCAGCCTGCTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGAATTAGAGGGGGAATTATGGGGATTGGAGATCAAGGGTTGAATACAAATTTGATGCAAGGCTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATATAGCAGCTGCTCCGTTACCTATTGCAACAGAATCGCCAAGGGACCAACTATCATCTGATGGGATTGGTAAAAGCAATGGTGATACCTCGTCTGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGGGGGAGGAGAAGTAACGGAATTGTCGACAAGGTTGTCGAGAGGAGGCAACGGAGAATGATTAAAAACAGAGAGTCCGCTGCAAGATCGCGGGCTCGAAAGCAGGCCTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAACAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAATGGATAAGCAACAAGGAATAAAGAAGCGATGCTTAAGACGAACGCAGACTGGCCCATGGTGCCGTGTAGCATATGTCTCAAGGCGTCTTGCTTGCAGAGTATCCTCCTCCACCCTCTGCCATGGAGAGGGAAATAAGTTTTTTGTGGCATTTCCTGATATGGCCCGACTGCTGCTGTGGTTGTGGGTAAATGTCAATCCTGAATGCAGGATTCATCAGCGTTCAATTCATTGCATGTCAACTGCTGCAACTGCCGTTCGATTTTCCTTTGTAATCTCTGCATCATGA | 1461 | 47.43 | MNFKDFGNDPSAGNGGGGGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSAAAVDKEGAGSVGRSGGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHASAKDGATVASNLQQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNTGFGIGFQRQAKVPENNNHIPIQSSNLSLNVNGVRTHQPQPIFPKQPAVTYGSQLALPSDGQLASPGIRGGIMGIGDQGLNTNLMQGSALQGGRMGVVNIAAAPLPIATESPRDQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGIVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVMDKQQGIKKRCLRRTQTGPWCRVAYVSRRLACRVSSSTLCHGEGNKFFVAFPDMARLLLWLWVNVNPECRIHQRSIHCMSTAATAVRFSFVISAS | 486 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 28433789 | 28437523 | + | ClCG08G016000.1 | Cla08g01575 | 279230 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01575 | 486 | CDD | bZIP_plant_BZIP46 | 333 | 385 | - | - | |
Cla08g01575 | 486 | MobiDBLite | consensus disorder prediction | 286 | 315 | - | - | |
Cla08g01575 | 486 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 198 | 411 | IPR043452 | GO:0003700|GO:0045893 | |
Cla08g01575 | 486 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 5 | 174 | IPR043452 | GO:0003700|GO:0045893 | |
Cla08g01575 | 486 | Coils | Coil | 349 | 386 | - | - | |
Cla08g01575 | 486 | Gene3D | - | 331 | 387 | - | - | |
Cla08g01575 | 486 | Pfam | bZIP transcription factor | 333 | 385 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01575 | 486 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 336 | 351 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01575 | 486 | MobiDBLite | consensus disorder prediction | 287 | 311 | - | - | |
Cla08g01575 | 486 | SUPERFAMILY | Leucine zipper domain | 333 | 381 | IPR046347 | GO:0003700|GO:0006355 | |
Cla08g01575 | 486 | SMART | brlzneu | 329 | 393 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01575 | 486 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cla08g01575 | 486 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 331 | 382 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g01575 | 486 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 198 | 411 | - | - | |
Cla08g01575 | 486 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 5 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01575 | Cla-Chr8:28433789 | Cla10g01807 | Cla-Chr10:33973432 | 4.25E-57 | dispersed | |
Cla10g00054 | Cla-Chr10:595667 | Cla08g01575 | Cla-Chr8:28433789 | 1.05E-17 | transposed | |
Cla02g00607 | Cla-Chr2:6651246 | Cla08g01575 | Cla-Chr8:28433789 | 4.24E-121 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61615 | PF00170 | bZIP_1 | 4.80E-13 | CL0018 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01575 | K14432 | - | csv:101223043 | 716.842 |