Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01581 ATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAATCAGCAATCATACAAATGCTGCTTTTCATTCTGCTGTTGAAGCTCGTGAAGGAATCTCTGATGTTGTGAATTGTCTGTTATCGTCTCTTGGTCTTCTCATATTCATTTCTAGATCAAGACTACAGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAATCAGCAATCATACAAATGCTGCTTTTCAGTATCCTGCTGTGCAATCCTGTGTTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCGGAGAAAGGAAACTTTATGATCGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGCGATTGTTTCAAGCGCACAATCCAGGAAGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCTGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCCGGTCTCTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTTTACCGTGGTTTATACTTTGGAATGTATGATTCTCTGAAGCCCGTTTTATTGACTGGGAAGATGCAGGATAGCTTCTTCGCTAGCTTTGCCTTGGGTTGGCTCATCACCAATGGTGCCGGTCTTGCATCTTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATTTTGAAGAACGAAGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCGAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTATGATAAGTTGCAGCGCGAAACCCTCTCTCCGGCTGAAATTTTCGCTTTCTTCCAAAGCGACATTGTAGCCGCGGCAGACTCCTCCCAAATTCTCTCGCGGCCATCAGTTTCTCCCAAGAGTTTCTCATCTGATCCGGACACTGGAAATTATTGCAGGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCATTTTATCCGAGGCGTGCATCAATCAGCAATCATACAAATGCTGCTTTTCAGTATCCTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCGGCGGAGAAAGGAAACTTTATGATCGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGCGATTGTTTCAAGCGCACAATCCAGGAAGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCTGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATCTCTTGTGTTGGTATCATCGTTTACCGTGGTTTATACTTTGGAATGTATGATTCTCTCAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGCTTCTTCGCTAGTTTTGCCTTGGGTTGGCTCATCACCAATGGTGCTGGTCTCGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATTGTCTTTGGGAAGAAATATGGATCTGGTGGTGCCTAA 2718 46.98 MADQVQHPTIYQKVAGQLSLQSRVASGFRSCDDGFRNPALYQRRASISNHTNAAFHSAVEAREGISDVVNCLLSSLGLLIFISRSRLQEEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSCDDGFRNPALYQRRASISNHTNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQRETLSPAEIFAFFQSDIVAAADSSQILSRPSVSPKSFSSDPDTGNYCREEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSCDDGFRNPAFYPRRASISNHTNAAFQYPATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28491837 28500762 + ClCG08G016060.1 Cla08g01581 279236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01581 905 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 94 469 - -
Cla08g01581 905 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 377 IPR018108 -
Cla08g01581 905 Gene3D Mitochondrial carrier domain 183 473 IPR023395 -
Cla08g01581 905 Gene3D Mitochondrial carrier domain 606 901 IPR023395 -
Cla08g01581 905 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 523 905 - -
Cla08g01581 905 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 67 - -
Cla08g01581 905 PRINTS Adenine nucleotide translocator signature 226 247 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 PRINTS Adenine nucleotide translocator signature 259 271 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 PRINTS Adenine nucleotide translocator signature 390 406 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 PRINTS Adenine nucleotide translocator signature 182 194 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 PRINTS Adenine nucleotide translocator signature 285 298 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 Pfam Mitochondrial carrier protein 808 893 IPR018108 -
Cla08g01581 905 Pfam Mitochondrial carrier protein 385 470 IPR018108 -
Cla08g01581 905 Pfam Mitochondrial carrier protein 707 803 IPR018108 -
Cla08g01581 905 Pfam Mitochondrial carrier protein 604 700 IPR018108 -
Cla08g01581 905 Pfam Mitochondrial carrier protein 284 380 IPR018108 -
Cla08g01581 905 Pfam Mitochondrial carrier protein 181 277 IPR018108 -
Cla08g01581 905 ProSiteProfiles Solute carrier (Solcar) repeat profile. 603 696 IPR018108 -
Cla08g01581 905 ProSiteProfiles Solute carrier (Solcar) repeat profile. 808 894 IPR018108 -
Cla08g01581 905 SUPERFAMILY Mitochondrial carrier 603 890 IPR023395 -
Cla08g01581 905 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 273 IPR018108 -
Cla08g01581 905 ProSiteProfiles Solute carrier (Solcar) repeat profile. 385 471 IPR018108 -
Cla08g01581 905 PRINTS Mitochondrial carrier protein signature 248 268 IPR002067 GO:0055085
Cla08g01581 905 PRINTS Mitochondrial carrier protein signature 185 198 IPR002067 GO:0055085
Cla08g01581 905 PRINTS Mitochondrial carrier protein signature 300 318 IPR002067 GO:0055085
Cla08g01581 905 PRINTS Mitochondrial carrier protein signature 350 368 IPR002067 GO:0055085
Cla08g01581 905 PRINTS Mitochondrial carrier protein signature 394 416 IPR002067 GO:0055085
Cla08g01581 905 PRINTS Mitochondrial carrier protein signature 198 212 IPR002067 GO:0055085
Cla08g01581 905 ProSiteProfiles Solute carrier (Solcar) repeat profile. 708 800 IPR018108 -
Cla08g01581 905 SUPERFAMILY Mitochondrial carrier 180 467 IPR023395 -
Cla08g01581 905 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 94 469 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 523 905 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla08g01581 905 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 67 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01138 Cla-Chr4:26568095 Cla08g01581 Cla-Chr8:28491837 1.21E-126 dispersed
Cla07g00234 Cla-Chr7:2593936 Cla08g01581 Cla-Chr8:28491837 2.62E-177 dispersed
Cla08g01581 Cla-Chr8:28491837 Cla08g01673 Cla-Chr8:29368469 3.29E-63 dispersed
Cla08g01581 Cla-Chr8:28491837 Cla08g01677 Cla-Chr8:29393289 2.80E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01581 K05863 - csv:101203733 718.768