Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla08g01611 | ATGAGCAAATGGCAAAATGGTGTCCCACCCACCACCATTGATTACAGATTTGGCCAAATGTTTCAATGGCCATCAATCACTCTGCCCAATGTGGACTTCTGTTGCCCTAAAAAAGACAAGAGTTTGAAGAAGAAAATGAAAATGAAGATGCAAACTTGCAGACTTTCACAATGGTTTCTTCTGTTTTTGATTTCATTCTGTTCATGTTCATTTACAGAAGCACAAAAGAGCAATCAGCAGTTGAAGAAGAAGACTTACATAATTCACATGGACAAAAGCAATATGCCACAAGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAATCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAACACAGTTGTTCATGGCTTCTCCACAAGATTGACTGTCGAGGAGGCTAAGTTAATAGAAAAGCAAGAAGGAATTCTTGCTGTCATACCTGAAGTGAAGTATGAGCTTCATACCACTCGAACGCCTGAGTTTCTTGGACTTGGGAAGAGTGTTTCTTTCTTCCCGGCGTCGGAGAAGGTCGGGGAAGTGATCATTGGAGTTCTCGACACCGGTGTATGGCCTGAATTGGAGAGCTTCAATGATAGAGGGCTTGGACCAGTACCTGCAAGCTGGAAAGGTGAGTGTGAAGTGGGTAAAAACTTCACCTCATCTAGTTGTAACAGGAAATTGATAGGAGCCAGGTACTTTTCCAAGGGCTATGAAGCAGCCTTTGGTGCAATTGATGAATCCCAGGAGTCGAAATCGCCAAGGGACGATGATGGCCATGGTTCTCACACGTCAACAACCGCTGCAGGATCCGCTGTGACGGGTGCCAGCCTCTTTGGCTTTGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGGTTGCGACATATAAGGTATGTTGGCTTGGAGGGTGTTTCGGCACTGACATTTTAGCTGCAATGGATAAGGCTATGGAAGATGGCGTCAATTTTCTATCCATGTCGCTTGGTGGATCCTCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCAGGGAATTTTTGTGTCATGTTCTGCTGGAAATGGTGGCCCATCCTCAGGTAGCTTGTCCAATGTGGCGCCATGGATAACCACGGTCGGCGCCGGGACGCTGGACAGAGACTTCCCAGCATATGTTACTCTTGGAAATGGGAAGAAGATCACAGGGGAGTCGCTCTACAGTGGAAAGCCTTTGCCGGACTCTTTACTACCAATTGTATATGCAGGCAATGCGAGTAACTCAACCAGTGGTAGCCTTTGCTTGAGCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTGTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGTTGGTGGTAAAAGAGGCCGGTGGTGTAGGGATGATTCTAGCCAACACTGAAACATATGGGGAAGAACAATTAGCCGATGCACATCTCTTGCCGACGGCGGCCGTTGGCCAAAAATCTGGCGACGCAATAAAGAGTTACATCATCTCCGACGCTAACCCAACAGCAACAATCAGCAGCGGCACCACAAGATTAGGCGTTCAACCGTCGCCGCTGGTGGCAGCATTCAGTTCTCGTGGCCCTAATCTCCTCACTCCACATATTCTCAAACCCGATTTGATAGCACCGGGAGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGCGGCACGTGGCCTTCAACATCATCTCCGGCACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCCGCTCATCCAGATTGGAGCCCAGCTGCCATTAGATCTGCCCTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCGATTCAAGACGTATCCAACGGATCACCGTCGACGCCGTTCGATGTCGGAGCCGGACATGTAAATCCAACGGCTGCCCTTGATCCCGGCCTTGTTTACGATACCACCACCGACGATTACTTCGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGACTTCACCTGTAATAGAAACAAGAACTACAAATTGGAGGATCTGAACTACCCGTCATTTGCAGTTCCACTAGAAACCCCTTCCACCAAAGGAGGTGAAGACGTCGCTCCGACCACCGTAAAATATACAAGGACTCTGACCAACAAGGGTGCTCCGTCGACGTATAAGGTCTCAGTGACGGCGAAAAGTCCATCGGTGAAGATTGTGGTTGAACCGGAATCATTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACATTCATTGCTTCTCCAATGCCGTCGGGATCGGAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATTGTGGGCAGCCCCATAGCTTTCACCTGGACTTAA | 2460 | 48.25 | MSKWQNGVPPTTIDYRFGQMFQWPSITLPNVDFCCPKKDKSLKKKMKMKMQTCRLSQWFLLFLISFCSCSFTEAQKSNQQLKKKTYIIHMDKSNMPQAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDRGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGTDILAAMDKAMEDGVNFLSMSLGGSSPDYYRDNVAIGAFSAAAQGIFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPDSLLPIVYAGNASNSTSGSLCLSSTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGVGMILANTETYGEEQLADAHLLPTAAVGQKSGDAIKSYIISDANPTATISSGTTRLGVQPSPLVAAFSSRGPNLLTPHILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSNGSPSTPFDVGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVISKKDFTCNRNKNYKLEDLNYPSFAVPLETPSTKGGEDVAPTTVKYTRTLTNKGAPSTYKVSVTAKSPSVKIVVEPESLSFAEANEQKSYTVTFIASPMPSGSESFARLEWSDGKHIVGSPIAFTWT | 819 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 28719089 | 28722319 | - | ClCG08G016360.2 | Cla08g01611 | 279266 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla08g01611 | 819 | Gene3D | - | 391 | 531 | - | - | |
| Cla08g01611 | 819 | Pfam | Peptidase inhibitor I9 | 85 | 160 | IPR010259 | - | |
| Cla08g01611 | 819 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 73 | 817 | IPR045051 | - | |
| Cla08g01611 | 819 | MobiDBLite | consensus disorder prediction | 251 | 273 | - | - | |
| Cla08g01611 | 819 | CDD | Peptidases_S8_3 | 157 | 629 | IPR034197 | - | |
| Cla08g01611 | 819 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 68 | 160 | IPR037045 | - | |
| Cla08g01611 | 819 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.7 | 73 | 817 | - | - | |
| Cla08g01611 | 819 | SUPERFAMILY | Subtilisin-like | 159 | 667 | IPR036852 | GO:0004252|GO:0006508 | |
| Cla08g01611 | 819 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 593 | 603 | IPR023828 | - | |
| Cla08g01611 | 819 | Gene3D | - | 680 | 818 | - | - | |
| Cla08g01611 | 819 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 156 | 663 | - | - | |
| Cla08g01611 | 819 | PRINTS | Subtilisin serine protease family (S8) signature | 261 | 274 | IPR015500 | - | |
| Cla08g01611 | 819 | PRINTS | Subtilisin serine protease family (S8) signature | 592 | 608 | IPR015500 | - | |
| Cla08g01611 | 819 | PRINTS | Subtilisin serine protease family (S8) signature | 183 | 202 | IPR015500 | - | |
| Cla08g01611 | 819 | Pfam | Fibronectin type-III domain | 710 | 815 | IPR041469 | - | |
| Cla08g01611 | 819 | Gene3D | Peptidase S8/S53 domain | 186 | 676 | IPR036852 | GO:0004252|GO:0006508 | |
| Cla08g01611 | 819 | CDD | PA_subtilisin_like | 397 | 524 | - | - | |
| Cla08g01611 | 819 | Pfam | PA domain | 423 | 510 | IPR003137 | - | |
| Cla08g01611 | 819 | SUPERFAMILY | PA domain | 444 | 511 | IPR046450 | - | |
| Cla08g01611 | 819 | Pfam | Subtilase family | 186 | 639 | IPR000209 | GO:0006508|GO:0008236 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla03g01443 | Cla-Chr3:29980684 | Cla08g01611 | Cla-Chr8:28719089 | 0 | dispersed | |
| Cla05g00825 | Cla-Chr5:8071108 | Cla08g01611 | Cla-Chr8:28719089 | 0 | dispersed | |
| Cla07g00778 | Cla-Chr7:21740772 | Cla08g01611 | Cla-Chr8:28719089 | 4.69E-150 | dispersed | |
| Cla08g01611 | Cla-Chr8:28719089 | Cla09g00096 | Cla-Chr9:943443 | 0 | dispersed | |
| Cla08g01611 | Cla-Chr8:28719089 | Cla08g01620 | Cla-Chr8:28818168 | 4.26E-169 | proximal | |
| Cla01g00326 | Cla-Chr1:3538905 | Cla08g01611 | Cla-Chr8:28719089 | 0 | transposed | |
| Cla01g02353 | Cla-Chr1:37274403 | Cla08g01611 | Cla-Chr8:28719089 | 0 | transposed | |
| Cla01g01692 | Cla-Chr1:31854378 | Cla08g01611 | Cla-Chr8:28719089 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla08g01611 | - | - | csv:101207099 | 1398.65 |