Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01611 ATGAGCAAATGGCAAAATGGTGTCCCACCCACCACCATTGATTACAGATTTGGCCAAATGTTTCAATGGCCATCAATCACTCTGCCCAATGTGGACTTCTGTTGCCCTAAAAAAGACAAGAGTTTGAAGAAGAAAATGAAAATGAAGATGCAAACTTGCAGACTTTCACAATGGTTTCTTCTGTTTTTGATTTCATTCTGTTCATGTTCATTTACAGAAGCACAAAAGAGCAATCAGCAGTTGAAGAAGAAGACTTACATAATTCACATGGACAAAAGCAATATGCCACAAGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAATCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAACACAGTTGTTCATGGCTTCTCCACAAGATTGACTGTCGAGGAGGCTAAGTTAATAGAAAAGCAAGAAGGAATTCTTGCTGTCATACCTGAAGTGAAGTATGAGCTTCATACCACTCGAACGCCTGAGTTTCTTGGACTTGGGAAGAGTGTTTCTTTCTTCCCGGCGTCGGAGAAGGTCGGGGAAGTGATCATTGGAGTTCTCGACACCGGTGTATGGCCTGAATTGGAGAGCTTCAATGATAGAGGGCTTGGACCAGTACCTGCAAGCTGGAAAGGTGAGTGTGAAGTGGGTAAAAACTTCACCTCATCTAGTTGTAACAGGAAATTGATAGGAGCCAGGTACTTTTCCAAGGGCTATGAAGCAGCCTTTGGTGCAATTGATGAATCCCAGGAGTCGAAATCGCCAAGGGACGATGATGGCCATGGTTCTCACACGTCAACAACCGCTGCAGGATCCGCTGTGACGGGTGCCAGCCTCTTTGGCTTTGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGGTTGCGACATATAAGGTATGTTGGCTTGGAGGGTGTTTCGGCACTGACATTTTAGCTGCAATGGATAAGGCTATGGAAGATGGCGTCAATTTTCTATCCATGTCGCTTGGTGGATCCTCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCAGGGAATTTTTGTGTCATGTTCTGCTGGAAATGGTGGCCCATCCTCAGGTAGCTTGTCCAATGTGGCGCCATGGATAACCACGGTCGGCGCCGGGACGCTGGACAGAGACTTCCCAGCATATGTTACTCTTGGAAATGGGAAGAAGATCACAGGGGAGTCGCTCTACAGTGGAAAGCCTTTGCCGGACTCTTTACTACCAATTGTATATGCAGGCAATGCGAGTAACTCAACCAGTGGTAGCCTTTGCTTGAGCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTGTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGTTGGTGGTAAAAGAGGCCGGTGGTGTAGGGATGATTCTAGCCAACACTGAAACATATGGGGAAGAACAATTAGCCGATGCACATCTCTTGCCGACGGCGGCCGTTGGCCAAAAATCTGGCGACGCAATAAAGAGTTACATCATCTCCGACGCTAACCCAACAGCAACAATCAGCAGCGGCACCACAAGATTAGGCGTTCAACCGTCGCCGCTGGTGGCAGCATTCAGTTCTCGTGGCCCTAATCTCCTCACTCCACATATTCTCAAACCCGATTTGATAGCACCGGGAGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGCGGCACGTGGCCTTCAACATCATCTCCGGCACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCCGCTCATCCAGATTGGAGCCCAGCTGCCATTAGATCTGCCCTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCGATTCAAGACGTATCCAACGGATCACCGTCGACGCCGTTCGATGTCGGAGCCGGACATGTAAATCCAACGGCTGCCCTTGATCCCGGCCTTGTTTACGATACCACCACCGACGATTACTTCGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGACTTCACCTGTAATAGAAACAAGAACTACAAATTGGAGGATCTGAACTACCCGTCATTTGCAGTTCCACTAGAAACCCCTTCCACCAAAGGAGGTGAAGACGTCGCTCCGACCACCGTAAAATATACAAGGACTCTGACCAACAAGGGTGCTCCGTCGACGTATAAGGTCTCAGTGACGGCGAAAAGTCCATCGGTGAAGATTGTGGTTGAACCGGAATCATTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACATTCATTGCTTCTCCAATGCCGTCGGGATCGGAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATTGTGGGCAGCCCCATAGCTTTCACCTGGACTTAA 2460 48.25 MSKWQNGVPPTTIDYRFGQMFQWPSITLPNVDFCCPKKDKSLKKKMKMKMQTCRLSQWFLLFLISFCSCSFTEAQKSNQQLKKKTYIIHMDKSNMPQAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDRGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGTDILAAMDKAMEDGVNFLSMSLGGSSPDYYRDNVAIGAFSAAAQGIFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPDSLLPIVYAGNASNSTSGSLCLSSTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGVGMILANTETYGEEQLADAHLLPTAAVGQKSGDAIKSYIISDANPTATISSGTTRLGVQPSPLVAAFSSRGPNLLTPHILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSNGSPSTPFDVGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVISKKDFTCNRNKNYKLEDLNYPSFAVPLETPSTKGGEDVAPTTVKYTRTLTNKGAPSTYKVSVTAKSPSVKIVVEPESLSFAEANEQKSYTVTFIASPMPSGSESFARLEWSDGKHIVGSPIAFTWT 819
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 28719089 28722319 - ClCG08G016360.2 Cla08g01611 279266
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01611 819 Gene3D - 391 531 - -
Cla08g01611 819 Pfam Peptidase inhibitor I9 85 160 IPR010259 -
Cla08g01611 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 73 817 IPR045051 -
Cla08g01611 819 MobiDBLite consensus disorder prediction 251 273 - -
Cla08g01611 819 CDD Peptidases_S8_3 157 629 IPR034197 -
Cla08g01611 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 68 160 IPR037045 -
Cla08g01611 819 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 73 817 - -
Cla08g01611 819 SUPERFAMILY Subtilisin-like 159 667 IPR036852 GO:0004252|GO:0006508
Cla08g01611 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 593 603 IPR023828 -
Cla08g01611 819 Gene3D - 680 818 - -
Cla08g01611 819 ProSiteProfiles Serine proteases, subtilase domain profile. 156 663 - -
Cla08g01611 819 PRINTS Subtilisin serine protease family (S8) signature 261 274 IPR015500 -
Cla08g01611 819 PRINTS Subtilisin serine protease family (S8) signature 592 608 IPR015500 -
Cla08g01611 819 PRINTS Subtilisin serine protease family (S8) signature 183 202 IPR015500 -
Cla08g01611 819 Pfam Fibronectin type-III domain 710 815 IPR041469 -
Cla08g01611 819 Gene3D Peptidase S8/S53 domain 186 676 IPR036852 GO:0004252|GO:0006508
Cla08g01611 819 CDD PA_subtilisin_like 397 524 - -
Cla08g01611 819 Pfam PA domain 423 510 IPR003137 -
Cla08g01611 819 SUPERFAMILY PA domain 444 511 IPR046450 -
Cla08g01611 819 Pfam Subtilase family 186 639 IPR000209 GO:0006508|GO:0008236
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01443 Cla-Chr3:29980684 Cla08g01611 Cla-Chr8:28719089 0 dispersed
Cla05g00825 Cla-Chr5:8071108 Cla08g01611 Cla-Chr8:28719089 0 dispersed
Cla07g00778 Cla-Chr7:21740772 Cla08g01611 Cla-Chr8:28719089 4.69E-150 dispersed
Cla08g01611 Cla-Chr8:28719089 Cla09g00096 Cla-Chr9:943443 0 dispersed
Cla08g01611 Cla-Chr8:28719089 Cla08g01620 Cla-Chr8:28818168 4.26E-169 proximal
Cla01g00326 Cla-Chr1:3538905 Cla08g01611 Cla-Chr8:28719089 0 transposed
Cla01g02353 Cla-Chr1:37274403 Cla08g01611 Cla-Chr8:28719089 0 transposed
Cla01g01692 Cla-Chr1:31854378 Cla08g01611 Cla-Chr8:28719089 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01611 - - csv:101207099 1398.65