Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01666 | ATGTTGAAGCTATTATCCTCATCTCACCGCATTTCCATCTTCATCTTCATCTTCCTCTGCTCTCCGCCGCTGCTTCCTTCCGCCGCTCTTCCCCTCTCCGACTCCGGTCATCAGCTTATCGCTAACGCTACCCTCCAGTCTAATAATGTATCCGTTCCGAGGAATAAGGAGGGCAGTTTTGCTGACATCATTGATCGTGCTTTGGAGAATGAATTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAAGCTTCAACAACAGTGTAGCGGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAACGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGACACTCCTACATTGATTGATCGAAAGGATAATGTCTTTATAATATCTAACTTCAAGTCTAAATATCCAGTGCTACAATTAGACTTGAGATTGATCTCTGATTTGGTAATCGTAATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCATGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTCGTCAGTGAAATGGTTCAAGTTGAAACGGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAGCTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGCCTGCTCCAAATTTTCCTGTTTATGTGCCTCAGTGGGATCACAGCCTCGGTGCTGAAGTTTTTGATGGAAAAGAACTCAACTAATGCTCTTCATGGACAAGTCACAATTGGCACCCTTATTCTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTAGGTGGGAATTCTGGTATTCTTCAAGGAGTAATATCCATGAGTAAAGTGTACGTTGGTGACCTTGGTTACTTTTTTGGTTGCTTTGTCAATTTTATCCCGTACATGTATTCCCTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGGTATGCTTTATTGCATTGATATATTTATTATTCTTGAAATTTATAAACCTGGTTTAACAACTGGACAAATGGAAGAAGTTCAGATGTATTTTCTAATTTATTTTTCTCTGCAGACCAATGAACTCTATCAATTAGCCTCTGTGGCGTTCTGCTTGCTCGTAGCATGGGTTGGTATCTACTTTCTTTTTCTGTGTGAGTTTGATTTTATGCATGCGAAGTGTAGTGATAAGTTGGGGCTGAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACACACACTTGAACAAATAGAGCCTATAAGGAACCTTTTTGCAGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTTGATATATTACTAGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGGTATAACAACAGGACAGCACTCCTGGTTGGAATGTCTCTGGCTCAGATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGCGCTTCTAATCTTCATCTAGTTGAGGGGAAACTGTATCTATTGCTTATTGGGACCACAGCCCTCAGTCTGGTGACAACTCCTTTTCTTTTCAAGCTGATACCTGCTGTAGTACATTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGATAGTCTCGTCGAGATTGGATTCAAAGGAGATATCATCCGCTCAGACAGTGTAAAGCAGCGAGTTATGTTGATAGTACAGGGACCTCATGATTCATAA | 1854 | 41.59 | MLKLLSSSHRISIFIFIFLCSPPLLPSAALPLSDSGHQLIANATLQSNNVSVPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQIFLFMCLSGITASVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVYVGDLGYFFGCFVNFIPYMYSLAFKVDDKSIITGMLYCIDIFIILEIYKPGLTTGQMEEVQMYFLIYFSLQTNELYQLASVAFCLLVAWVGIYFLFLCEFDFMHAKCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTALLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRVMLIVQGPHDS | 617 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 29306965 | 29315790 | - | ClCG08G016990.2 | Cla08g01666 | 279321 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01666 | 617 | PANTHER | POTASSIUM/PROTON ANTIPORTER-RELATED | 380 | 617 | IPR045158 | GO:0015386|GO:0071805|GO:1902600 | |
Cla08g01666 | 617 | PANTHER | POTASSIUM/PROTON ANTIPORTER-RELATED | 260 | 322 | IPR045158 | GO:0015386|GO:0071805|GO:1902600 | |
Cla08g01666 | 617 | PANTHER | POTASSIUM/PROTON ANTIPORTER-RELATED | 14 | 262 | IPR045158 | GO:0015386|GO:0071805|GO:1902600 | |
Cla08g01666 | 617 | Pfam | Sodium/hydrogen exchanger family | 166 | 264 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cla08g01666 | 617 | Pfam | Sodium/hydrogen exchanger family | 420 | 568 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cla08g01666 | 617 | PANTHER | K(+) EFFLUX ANTIPORTER 6 | 380 | 617 | - | - | |
Cla08g01666 | 617 | PANTHER | K(+) EFFLUX ANTIPORTER 6 | 260 | 322 | - | - | |
Cla08g01666 | 617 | PANTHER | K(+) EFFLUX ANTIPORTER 6 | 14 | 262 | - | - | |
Cla08g01666 | 617 | Gene3D | - | 380 | 575 | IPR038770 | - | |
Cla08g01666 | 617 | Gene3D | - | 159 | 265 | IPR038770 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01507 | Cla-Chr3:30667795 | Cla08g01666 | Cla-Chr8:29306965 | 0 | dispersed | |
Cla05g00817 | Cla-Chr5:7965902 | Cla08g01666 | Cla-Chr8:29306965 | 0 | dispersed | |
Cla08g01666 | Cla-Chr8:29306965 | Cla09g01607 | Cla-Chr9:32211546 | 7.62E-07 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01666 | - | - | csv:101217282 | 895.96 |