Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01670 ATGTTCTTCATTGAGGATTTGTGGCAGATGCTCTTCGTTCGAGGTTTTCAGGATACAACTCGACTTCTCTCTGAGTCTTTTATACGGACGATATCCGAATCCATGGCCAATTCATCTTGTGGGGTCTCGGAATTAGAACTCTGTAGGAATGATACGGCTGCGCTCCATTTCAAATTAGTCGCCATCGCCTCGATTCTAACATCGGGAGTCATCGGAATCGCCATTCCGTTGTTTGGTAGACAGAGTCGGTTCCTCAAAACAGACGGCAACCTGTTTGTGGCGGCGAAGGCGTTTGCCGCCGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAGGCCCTCTCCGATCCGTGCTTGCCGGAATTTCCTTGGTCTAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCGTCGCTGTTGACGCTCCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGGATGATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCGATTATGGATTCGGGGTTGGAATCCGGCATTGTTCCGGCCGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGACGGCGGCGCGATGCACATTGTCGGAATGCATGCCCACGCCGCCCACCACCGGCACAGTCATCCACAGGGGAAGCAGGCATGTGATGGGCACGTGACGGGTCATGATCATGGGCATGGGCACGGGCATGCCCATGGACATGTTCATTCTCATGGGCTGGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTCATAATTGGGCTATCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCTCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTCGCCATCACCACACCCCTCGGCATCTCCATAGGCGCTGCCATTGCCTCCACTTACAACCCCAACAGCACCGGGGCATTGGTTGCTGAAGGCATTTTGGACTCTCTATCGGCTGGAATTTTGGTGTACATGGCTCTGGTTGATTTGATTGCAGCCGACTTTCTTAGCAAAAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGGTTGATGTCTTCGCTTGCGCTTTGGGCTTGA 1260 52.38 MFFIEDLWQMLFVRGFQDTTRLLSESFIRTISESMANSSCGVSELELCRNDTAALHFKLVAIASILTSGVIGIAIPLFGRQSRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMIRSKEEANRVGSIMDSGLESGIVPAGDLNVKVFGEEDGGAMHIVGMHAHAAHHRHSHPQGKQACDGHVTGHDHGHGHGHAHGHVHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGISIGAAIASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29348420 29351261 - ClCG08G017030.2 Cla08g01670 279325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01670 419 PANTHER ZINC/IRON TRANSPORTER 35 419 - -
Cla08g01670 419 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 419 - -
Cla08g01670 419 TIGRFAM zip: ZIP zinc/iron transport family 40 419 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cla08g01670 419 MobiDBLite consensus disorder prediction 235 254 - -
Cla08g01670 419 Pfam ZIP Zinc transporter 56 416 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01670 Cla-Chr8:29348420 Cla11g01645 Cla-Chr11:30141037 4.71E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01670 K14709 - csv:101218224 747.658