Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01723 | ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCGCAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGACAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTACGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGATATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCGGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCCCGGTTAGTACTGGATCCTCCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTTAGGATTTGTTTGTCATTTTGTTCCTCTTTGTTGA | 1614 | 51.86 | MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDVERLGFVCHFVPLC | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 29773372 | 29779974 | + | ClCG08G017650.2 | Cla08g01723 | 279378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01723 | 537 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 | 1 | 528 | - | - | |
Cla08g01723 | 537 | Coils | Coil | 15 | 37 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 303 | 322 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 439 | 515 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 483 | 515 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 1 | 344 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 227 | 248 | - | - | |
Cla08g01723 | 537 | Pfam | Plant specific eukaryotic initiation factor 4B | 457 | 517 | IPR010433 | GO:0003743 | |
Cla08g01723 | 537 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 459 | IPR010433 | GO:0003743 | |
Cla08g01723 | 537 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 528 | IPR010433 | GO:0003743 | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 276 | 302 | - | - | |
Cla08g01723 | 537 | Coils | Coil | 403 | 430 | - | - | |
Cla08g01723 | 537 | MobiDBLite | consensus disorder prediction | 59 | 81 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01138 | Cla-Chr2:24544299 | Cla08g01723 | Cla-Chr8:29773372 | 1.86E-28 | dispersed | |
Cla08g01723 | Cla-Chr8:29773372 | Cla02g00442 | Cla-Chr2:4358727 | 1.15E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01723 | - | - | csv:101206526 | 910.983 |