Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01738 ATGCCCAATGCCCAATGCCCAACATCAGCCATCCAGTATGAAACCGGAGAGCAATACGCCAAACCAAATGCGGCTCATTGCCTCCCACTGCCTACTACCTCCCCCACCACATGCCCTCTAATTCAAACCAATTACCTTTGTTTGACTTTTATTAGCTTCAGAATCGGAATAAGGGAGGTGACGATGAGGACTGGATCACCACTTGGATTGTTCATTTTCATCACCGCTCTTCTCTTACTTCAATTATCCACAGTGGCAGACCCCAGATCCCGGACCGTCAAGATACTATGTTCAACCGTGCTAGAGCACAATACAACCGCCTTTGTGCCCAATTTCGTGGCCACGATGCAAATAATCAGCGACCAAATGCGAACCGGTGGGTTTGGAGTCGCAGTTGTGGGTAAAGGCCCGGACGCCAACTACGGCCTTGCTCAATGTTACGGAGATTTGTCGCTGATGGACTGTGTGTTGTGTTATGCGGAAGCCCGTACTGTCCTTCCTCAATGCTTCCCTTTCAACGGCGGCCGGATTTTCCTGGATGGCTGCTTCATGAGGGCTGAGAACTACAGCTTTTATGACGAATTTTCGGGGCCTCTTGACAGGGCTGTGTGCGGTAACAATTCCATCACCAACTCCCTTTTTGAACAGTCGGCCAGGCAGGCTGTGGCCCGAGCAACCCAAACTGCACCCAACAATGGAGGGTTTGCCAGAATTCAAGTGGCTCCCCCTGGAACCCCCAATGCCTCCGTTTACCTGTTGGCTCAGTGCTGGAGGAATTTGAATCGCACCTCCTGCACTTCCTGTTTGCAAAACGCCTCTGCTTCTATCTTGAAATGCTTGCCTCGATCCGAAGCAAGAGCCCTCAACACAGGTTGCTTCATGAGATACTCTAACCTTGACTTCTTAAATGCCGAAGCTTCAGCTTCAAGGTCAAGGGGTACTATTATAGAAATTGTAGTCTCCCTGGTGAGTTCTGTTGCTGTTTTAGTCGTTGGAGTGTTGATTGGAATCTACATCTGGAATAACAGATATGTAAAGAAGAAGCGAAGAGGATCTTTTGCTGAGGCTAACAAGCTTGGACAAGGAGGATTTGGCACTGTTTATAAGGCAAGTCTTGTTTTGTTTGCTTCAGGAGTTCTGTCGGACGGAAGAGAGATAGCTGTGAAGAGGCTTTTCTTCAACAACAAACATAGAGCAGCAGACTTTTACAATGAAGTAAACATAATCAGTATTGTTCTGGACCTGAAAGTTTACTCGTCTATGAATACCTTGCCAACAAGAGTCTCGACCGCTTCATTTTCGTTTAAGAAACAAAAACTATATGCAGATCGAGATAGAGGTAAATCGCTCAATTGGGAGAAGAGATTTGATATCATTGTGGGAACAGTTGAAGGTTTGGCTTACCTTCATGAGAACTCAAAAACCAAGATCATACACAGAGACATCAAGGCTAGTAACATCCTGCTAGACTCCAAGCTTCGAGCTAAAATAGCTGATTTTGGATTAGCTAGATCCTTTGAAGAAGATGAGAGTCACATCAGCACGGCCATTGCTGGAACCTTGGGATACATGGCGCCAGAGTATTTAGCTCATGGGCAGCTAACAGAAAAGGCAGATGTGTACAGTTTTGGTGTGGTTTTGCTGGAGACCGTGACCGGCATACAAAACAGTAGAAGCAAAACCTCTGACTACTTGGAAAGCATAGTACTAATTGCATGGAAGCACTTTCAATCGGGGACAGTGGAAAGGATACTGGATCCGAACCTTATGGTTGAGGAAGATGGGAGCATAAAAGAGGAGATATTGAGAGTGGTGCAGATAGGGCTTCTTTGCACACAGGAGACTGCATCTCTGCGACCCACAATGTCCAAGGTACTGCAGATGCTGATGAAGAAGGAAGAGGAACTTCCGGCGCCGACCAACCCACCGTTCATGGACGAGAGGACAATGGAATTAAACGACACCAGTGGCACTGAGGATCCATCATGCTTCAACCTCACGAAAGCTTCTTCCTCAGCGGCCACCGAAGAATTTTGTAGATATGGTGAAGGAGAAGAACGAATGTCTTTGCAACCACCTCTCTTCAATTCTAGAACTGTGTGTCCTTTTTCAACCGGAAACGCTACACTCCTTTTCTCCATCTCCACCTCCTTCCTCGACTTGACTTCTTGTCAATTAGAATCATCCACTCCCATTACATCACCCCTTATTTTCAACACAAACATTAAACTTCTATATTGGCTACCACATTTCTCGGGAACTGTCAACCAATCTTCTTCTTCTTCTTCTTCTTCTTCACCCTTCGGACTCAACAGAACCCCGGATTCCATGGCGATCCAGCTTGTTTATGCTTCCAAATATGTCCTATTTTCAATCATCACTATTCTTCTGCTGCTCCCAACTTCGACTCTGGGGAAGCCAAGAGATCAAACTGTGAGAGTCATCTGCGGGAAAGAACTGGAGCACAACACCACCGCCTACGTCCCAAACTTTTTTGGTTCCATGGAAAAAGTTAGACAACAAATCGAAACTTCAGGATTTGGAACCGCCGGTACAGGAATAGGACCTGATGCCAGCTATGGGCTTGCCCAATGCCATGGAGATCTCTCACCCCTTGAATGTGTGCTGTGTCATTCTCAAGCACGTACAATGCTCCCCCAATGCTTCCCTTTCAATGGCGGCCGAGCTTTCATTGATGGCTGCTTCCTGAGGTTCGAAAACTATACCTTTTTCGACGAATACAAAGGACCTGAAGACACTGCAGTTTGTGGGAACTTCACCCAAAATGACCCCAACTATAGACAAGCAGTCAAGGAGGCAGTGATGCAAGTGGTTAACGGTGCACCAGACAACAGAGGCTTTGCAAAAGCTCGAATGGCTGTGGCTGGGATGGCAAATGAGTCCGCCGCTTATGCTCTGGGTCAGTGCTGGAGAAGTTTGAACCGCAGCTCTTGCAGTTCATGTTTGTTAATTGCTTCTGCTTCAATGTTGCGATGTTTACCTCAATCTGAAGGACGAGCACTGAACACAGGCTGCTTCATGAGATATTCAAATACAGACTTCCTCAACAAGGACATCAAAAATAGTTCCAGAGGTAAAACTGATCCTGTCACAACTGAATTGATAGTTTCAGTTTTGAGTTCTGTTGTTGTTTTGATAGTTGGCCTGGCGATTGGAGCTTATATCTGGAAGCGCAGACATATACAAAAGAAAAGGAAAGGAGGTTCAACTGATGTGAAGAAGTTTGCAAAAACTCTTCAAGATAGTAACTTGGAATTCAAGTACTCAACCCTTGAAAAAGCTACCAACAATTTCAGCCTTGATAACAAGATTGGACAGGGCGGGTTTGGCTCTGTTTATAAGGGAACTCTATCCGATGGAAGAGAAATTGCTGTGAAGAGATTCTTCTTTGATAACAGACATAGAGCAGCAGATTTCTACAATGAAGTAAACATGATCAGCATTGTCGAACATAAAAATCTGATACCAGTAGCAGTAAAGCTCTTGATTGGGATAAGAGATACAACATCATCACTGGAACGGTTGAAGGCGAGTAATATCTTGCTGGATCTAAAGCTTCAAGCGAAAATAGCAGATTTTGGATTAGCAAGGTCTTTCCAAGAAAGCAAGAGCCATATTAGCACGGCTGTTGCAGGAACCCTAAGATCTGCAGAGCTATTAACATTCCCTCTTTCTACCTTCTGTATCTACAGAGGATATATGGCTCCGGAGTATCTAGCTTATGGCCAGTTATCAGAAAAGGCCGACGTCTACAGCTTTGGAGTGCTTTTGTTAGAAATTGTTACAGGATTACAATATAGTGGCATTCAAGTCTCCGGCAACATTGAAAGTCTGATCACTGCTATGTGGAGACATTTCCAAGCAGGCACAGTTGAGAGATTATTTGATCCAAATCTCAATCTTCAGAATCACTATAACAAGAAAGTGAAGGATGAGGTAAAGAGAGTGGTGCACATAGGGCTCTTATGCATCCAGGAGATTCCATCTCTACGACCAACAATGTCGAAGGTTCTACGAATGCTGACCATGGAGGAAGAGCATCTTCCTCCACCCACCAAACCACCCTTCATGGATGAGATGACCATGGAACTTGATGATTCATGCAAGTACTCACGATGTTATTCTAATACGGAGGGATCTTCTTCTACTGCCACAGTCGGCCATACTCCCAACCCCACTAAAGCAGTCCCAAGAATGGGAGTGGTTTGCATTCCTCGCATAAATTGTCAGTCTCTTGAGCACCACGAAGAGAAAGTATCCATTAGCTAG 4290 45.29 MPNAQCPTSAIQYETGEQYAKPNAAHCLPLPTTSPTTCPLIQTNYLCLTFISFRIGIREVTMRTGSPLGLFIFITALLLLQLSTVADPRSRTVKILCSTVLEHNTTAFVPNFVATMQIISDQMRTGGFGVAVVGKGPDANYGLAQCYGDLSLMDCVLCYAEARTVLPQCFPFNGGRIFLDGCFMRAENYSFYDEFSGPLDRAVCGNNSITNSLFEQSARQAVARATQTAPNNGGFARIQVAPPGTPNASVYLLAQCWRNLNRTSCTSCLQNASASILKCLPRSEARALNTGCFMRYSNLDFLNAEASASRSRGTIIEIVVSLVSSVAVLVVGVLIGIYIWNNRYVKKKRRGSFAEANKLGQGGFGTVYKASLVLFASGVLSDGREIAVKRLFFNNKHRAADFYNEVNIISIVLDLKVYSSMNTLPTRVSTASFSFKKQKLYADRDRGKSLNWEKRFDIIVGTVEGLAYLHENSKTKIIHRDIKASNILLDSKLRAKIADFGLARSFEEDESHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVVLLETVTGIQNSRSKTSDYLESIVLIAWKHFQSGTVERILDPNLMVEEDGSIKEEILRVVQIGLLCTQETASLRPTMSKVLQMLMKKEEELPAPTNPPFMDERTMELNDTSGTEDPSCFNLTKASSSAATEEFCRYGEGEERMSLQPPLFNSRTVCPFSTGNATLLFSISTSFLDLTSCQLESSTPITSPLIFNTNIKLLYWLPHFSGTVNQSSSSSSSSSPFGLNRTPDSMAIQLVYASKYVLFSIITILLLLPTSTLGKPRDQTVRVICGKELEHNTTAYVPNFFGSMEKVRQQIETSGFGTAGTGIGPDASYGLAQCHGDLSPLECVLCHSQARTMLPQCFPFNGGRAFIDGCFLRFENYTFFDEYKGPEDTAVCGNFTQNDPNYRQAVKEAVMQVVNGAPDNRGFAKARMAVAGMANESAAYALGQCWRSLNRSSCSSCLLIASASMLRCLPQSEGRALNTGCFMRYSNTDFLNKDIKNSSRGKTDPVTTELIVSVLSSVVVLIVGLAIGAYIWKRRHIQKKRKGGSTDVKKFAKTLQDSNLEFKYSTLEKATNNFSLDNKIGQGGFGSVYKGTLSDGREIAVKRFFFDNRHRAADFYNEVNMISIVEHKNLIPVAVKLLIGIRDTTSSLERLKASNILLDLKLQAKIADFGLARSFQESKSHISTAVAGTLRSAELLTFPLSTFCIYRGYMAPEYLAYGQLSEKADVYSFGVLLLEIVTGLQYSGIQVSGNIESLITAMWRHFQAGTVERLFDPNLNLQNHYNKKVKDEVKRVVHIGLLCIQEIPSLRPTMSKVLRMLTMEEEHLPPPTKPPFMDEMTMELDDSCKYSRCYSNTEGSSSTATVGHTPNPTKAVPRMGVVCIPRINCQSLEHHEEKVSIS 1429
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 29872343 29878958 + ClCG08G017800.1 Cla08g01738 279393
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01738 1429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 71 659 - -
Cla08g01738 1429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 787 1165 - -
Cla08g01738 1429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 1182 1379 - -
Cla08g01738 1429 ProSiteProfiles Gnk2-homologous domain profile. 914 1021 IPR002902 -
Cla08g01738 1429 SUPERFAMILY Protein kinase-like (PK-like) 1093 1379 IPR011009 -
Cla08g01738 1429 ProSitePatterns Protein kinases ATP-binding region signature. 1111 1133 IPR017441 GO:0005524
Cla08g01738 1429 Gene3D Phosphorylase Kinase; domain 1 1065 1167 - -
Cla08g01738 1429 ProSiteProfiles Gnk2-homologous domain profile. 90 191 IPR002902 -
Cla08g01738 1429 Gene3D Phosphorylase Kinase; domain 1 345 417 - -
Cla08g01738 1429 Pfam Protein kinase domain 1182 1346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01738 1429 Pfam Protein kinase domain 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01738 1429 SUPERFAMILY Protein kinase-like (PK-like) 339 630 IPR011009 -
Cla08g01738 1429 ProSitePatterns Protein kinases ATP-binding region signature. 359 389 IPR017441 GO:0005524
Cla08g01738 1429 ProSiteProfiles Gnk2-homologous domain profile. 809 910 IPR002902 -
Cla08g01738 1429 SMART serkin_6 353 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01738 1429 SMART serkin_6 1105 1350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01738 1429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Cla08g01738 1429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 787 1165 - -
Cla08g01738 1429 Pfam Salt stress response/antifungal 207 298 IPR002902 -
Cla08g01738 1429 Pfam Salt stress response/antifungal 827 908 IPR002902 -
Cla08g01738 1429 Pfam Salt stress response/antifungal 106 189 IPR002902 -
Cla08g01738 1429 Pfam Salt stress response/antifungal 923 1018 IPR002902 -
Cla08g01738 1429 Gene3D Transferase(Phosphotransferase) domain 1 438 641 - -
Cla08g01738 1429 Gene3D Transferase(Phosphotransferase) domain 1 1169 1356 - -
Cla08g01738 1429 ProSiteProfiles Protein kinase domain profile. 353 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01738 1429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 71 659 - -
Cla08g01738 1429 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1182 1379 - -
Cla08g01738 1429 ProSiteProfiles Protein kinase domain profile. 1048 1364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01738 1429 ProSiteProfiles Gnk2-homologous domain profile. 196 301 IPR002902 -
Cla08g01738 1429 Gene3D - 810 910 IPR038408 -
Cla08g01738 1429 Gene3D - 90 191 IPR038408 -
Cla08g01738 1429 Gene3D - 200 301 IPR038408 -
Cla08g01738 1429 Gene3D - 920 1021 IPR038408 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01738 Cla-Chr8:29872343 Cla10g01334 Cla-Chr10:28305246 1.44E-97 dispersed
Cla05g02559 Cla-Chr5:36880979 Cla08g01738 Cla-Chr8:29872343 2.04E-104 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80769 PF00069 Pkinase 5.30E-34 CL0016 Cla PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01738 - - cmax:111492443 1936.77