Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00022 | ATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTCCTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGGTCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTGACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG | 396 | 49.24 | MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 276663 | 278265 | - | ClCG09G000260.1 | Cla09g00022 | 279442 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00022 | 131 | Pfam | Profilin | 1 | 129 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Cla09g00022 | 131 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 129 | IPR036140 | - | |
Cla09g00022 | 131 | PANTHER | PROFILIN | 1 | 131 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 27 | 40 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 52 | 66 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 71 | 80 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 84 | 99 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 104 | 117 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Plant profilin signature | 117 | 130 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 130 | - | - | |
Cla09g00022 | 131 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Profilin signature | 21 | 30 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Profilin signature | 40 | 60 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Profilin signature | 64 | 78 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Profilin signature | 100 | 113 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PRINTS | Profilin signature | 113 | 130 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | CDD | PROF | 2 | 129 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | SMART | prof_2 | 1 | 131 | IPR005455 | GO:0003779 | |
Cla09g00022 | 131 | PANTHER | PROFILIN | 1 | 131 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla07g01272 | Cla09g00022 | CCT | |
Cla07g01272 | Cla09g00022 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00022 | Cla-Chr9:276663 | Cla11g00182 | Cla-Chr11:2171837 | 2.58E-73 | dispersed | |
Cla11g01470 | Cla-Chr11:28339638 | Cla09g00022 | Cla-Chr9:276663 | 6.84E-73 | transposed | |
Cla07g01272 | Cla-Chr7:29844969 | Cla09g00022 | Cla-Chr9:276663 | 1.63E-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00022 | K05759 | - | pop:7475105 | 249.21 |