Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00030 | ATGGATGTTTCAACATATTTGCTCTCTGCTTTTCTGAGTGGCCTAGCTCTTCTCAATCTTGTTCAAGCTCAAGGTCAATTAGGCTTCATAAGCTTAGATTGTGGATTGCCACCAAACACAAACTACATTGAACCAACAACAACACTTCAATTTACTTCTGATGCTGCTTATATAAACAGTGGTGAAAGCAAAAGCTTATCCTCTAATTATAACGAATATCTACAACGACAATATCTTCATGTTAGAAGCTTTACCCAAGGACGTAGGAATTGCTACAATCTAAGTGTAAAAAGGGATACAAAATATTTGATGCGAGCAAGTTTTTTCTATGGAAATTACGATGGGCTCAGCCAACTGCCGAAATTCGATCTCTATTTTGGAGATAGCTTATGGAAGACAGTGAATTTTACTGATGAAAACACATATACCACAATAGATTCCATACATGTAACCTCAGACAATCAAGTACAAATTTGTCTCGTCAACACAAACACTGGAACTCCATTCATCTCTTCATTGGAATTCAGACCTTTGCCAAATGAGACTTATAAGTTCTTGACAAGATCGTTGTTGCTTTACTATCGATTAGATATGGGTACAACAACGAACGAAACATACAGGTTTCCTGGTGATATATATGATCGATTTTGGACGCCTTTCAATTGGTACGAGTGGACAAGCATAAGTACCACACTTAAGATAGATTCAGCTGATAATAATTACTACCAGCCAGGATCTGCTGTCATGGGAACTGCAGCTATTAGAATAGATACAAAAAAGCCTATGGAAATTTGGTGGGAGCCTGAAGATGAAAACACCCAGTATTATGTATACATGCACTTTGCTGAAGTTGAAAATCTCCAAGCCAATCAATCCAGAGGATTCAACGTCACTTATAATGGGAGTTTTTGGTATGGTCCTCTCATTCCCAACTACTTGTCAACAATAACGCTCTACAATCGAGGGCCATTACCAACACCAAATAAAAAGCATCTGTTCTCATTTATACAAATTGAAAATTCAACACGCCCTCCAATCATAAATGCTATGGAAATTTATTCTGTAATAGATCTATCAGAGCTAACGTCAGATCAAGGAGATGTGGATGCAATAACAAGCATCAAGTCAACTTACGGAATAGTCAGAGATTGGGAAGGAGATCCATGTGTTCCAAGAGCATACCCTTGGGAGGGTATAGATTGTACCAAAACAAATGGAACTGCTCCTAGAATCGTGTCTTTGAATTTGTCATCAAGTGGATTGACAGGAGAGATTTCTCAAAGTATAGAGAATCTACAAATGATACAAATATTGGACTTGTCAAACAATGGCTTGACGGGAACTATCCCTGATTTTCTGTCTAACTTGTCAAACCTTGAAGTCTTAAAGTTAGACAACAACAAGCTTTCAGGCTCTATTCCATCTGAACTCGTTAAGAGACTCAATAATGGTTCATTAACGTTAAGTGTTCAAGGGAATCCAAATCTAGATTGCATATCAAATTCGTGCAAGAGTAAGAAGACTAGTGTTGTTATTCCAATTGTAGCATCAATTGGCGGAGTGGTAGTCATCATTGTAGTTTCAATCATCATCCTTTGGATTGTTAAATCAAGGAAGAAACGAAAAAATGAAACCGTTGTTCCAAAGGTGGATCCCTCAGGAAGCAATGACCAAATAAGTGATCAGTTGTTGGAGACAAGGAGGCGGCAGTTCACATATTCAGAAGTCTTGAGGATGACCAACAATTTCGAGAGAATCCTAGGAAAAGGAGGTTTCGGGATGGTTTATTATGGCACCATAAATGACACTCAAGTGGCTGTGAAGATGCTATCTCAAGCTTCAGGTCAAGGTTATCAACAGTTTCAAGCAGAGGTTACACTTCTTTTGAGAGTTCACCACAAAAACTTGACAAGTCTTGTGGGGTATTTGAATGAAGGAGACCGCCTTGGGCTCATTTATGAGCTCCGGATAGCCATGGATGCAGCACAAGGATTGGAGTACCTACACGATGGTTGCAAGCCACCCATAATCCATAGAGATGTGAAAACAACAAACATCTTATTGACAGAGAATTTCCAAGCCAAACTTGCAGATTTTGGTTTATCCAAAAGCTTCCCAGTAGATGGCAACAAAACTAACAACTACATGTCCACCATTGTTGCTGGAACCCCTGGTTACCTTGATCCAGACTACTACTTATCGAACAGGCTGACGGAGAAAAGCGATGTGTACAGCTTTGGAGTGGTTCTGTTGGAGATAATCAGCTGCAGACCTGTGATATCAAGAAGCGAAGAAAATGGTCATATCAGTAAATGGGTGAACTCGATGGTGGCTCAAGGGGACATAAATGGAATAGTTGATGAAAGATTGAGAGGAAAATATGATGGTAACTCAGTTTGGAAGGCAGTGGAGGTGGCGTTGAGTTGTGTATCTGTGAACTCTGGAAAAAGACCGACGATGAACCACGTGGTGGCGGAACTGAAGAGTTGTCTGGCCATGGAATTGGAACGGACGCCGGAGAGTCAAGGTTTCGATTCGACGAATTCCGTTAACATGATGTCCATTGTTATGGATTACAGTGAATCCGCACCAATGGCGAGTGTTGAAGGGAATCCAAATCTAGATGCATGTCTATCAGATTCATGTGCAAGGAAGAAGAGTGAGAAAAAAAAATGTGCATCAATTGGTGCATTGGTAGTCATCGCTGCAATTGCAACTAGAGTCTTTTGGATCGTTAAATCAAAAAAGAAACAGAAAAGCGAAAGTGTTGGTTTATTGGGGTCAAAAAGAGGAAATTTACATATTCAGAAGTATTGA | 2817 | 39.72 | MDVSTYLLSAFLSGLALLNLVQAQGQLGFISLDCGLPPNTNYIEPTTTLQFTSDAAYINSGESKSLSSNYNEYLQRQYLHVRSFTQGRRNCYNLSVKRDTKYLMRASFFYGNYDGLSQLPKFDLYFGDSLWKTVNFTDENTYTTIDSIHVTSDNQVQICLVNTNTGTPFISSLEFRPLPNETYKFLTRSLLLYYRLDMGTTTNETYRFPGDIYDRFWTPFNWYEWTSISTTLKIDSADNNYYQPGSAVMGTAAIRIDTKKPMEIWWEPEDENTQYYVYMHFAEVENLQANQSRGFNVTYNGSFWYGPLIPNYLSTITLYNRGPLPTPNKKHLFSFIQIENSTRPPIINAMEIYSVIDLSELTSDQGDVDAITSIKSTYGIVRDWEGDPCVPRAYPWEGIDCTKTNGTAPRIVSLNLSSSGLTGEISQSIENLQMIQILDLSNNGLTGTIPDFLSNLSNLEVLKLDNNKLSGSIPSELVKRLNNGSLTLSVQGNPNLDCISNSCKSKKTSVVIPIVASIGGVVVIIVVSIIILWIVKSRKKRKNETVVPKVDPSGSNDQISDQLLETRRRQFTYSEVLRMTNNFERILGKGGFGMVYYGTINDTQVAVKMLSQASGQGYQQFQAEVTLLLRVHHKNLTSLVGYLNEGDRLGLIYELRIAMDAAQGLEYLHDGCKPPIIHRDVKTTNILLTENFQAKLADFGLSKSFPVDGNKTNNYMSTIVAGTPGYLDPDYYLSNRLTEKSDVYSFGVVLLEIISCRPVISRSEENGHISKWVNSMVAQGDINGIVDERLRGKYDGNSVWKAVEVALSCVSVNSGKRPTMNHVVAELKSCLAMELERTPESQGFDSTNSVNMMSIVMDYSESAPMASVEGNPNLDACLSDSCARKKSEKKKCASIGALVVIAAIATRVFWIVKSKKKQKSESVGLLGSKRGNLHIQKY | 938 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 339249 | 347103 | + | ClCG09G000360.1 | Cla09g00030 | 279450 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00030 | 938 | ProSiteProfiles | Protein kinase domain profile. | 581 | 831 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00030 | 938 | Pfam | Malectin-like domain | 32 | 355 | IPR024788 | - | |
Cla09g00030 | 938 | SUPERFAMILY | Protein kinase-like (PK-like) | 557 | 827 | IPR011009 | - | |
Cla09g00030 | 938 | Gene3D | Ribonuclease Inhibitor | 368 | 497 | IPR032675 | - | |
Cla09g00030 | 938 | Pfam | Protein tyrosine and serine/threonine kinase | 583 | 655 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g00030 | 938 | Gene3D | Phosphorylase Kinase; domain 1 | 563 | 651 | - | - | |
Cla09g00030 | 938 | ProSitePatterns | Protein kinases ATP-binding region signature. | 587 | 608 | IPR017441 | GO:0005524 | |
Cla09g00030 | 938 | Pfam | Protein kinase domain | 658 | 825 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00030 | 938 | Gene3D | Transferase(Phosphotransferase) domain 1 | 652 | 835 | - | - | |
Cla09g00030 | 938 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 676 | 688 | IPR008271 | GO:0004672|GO:0006468 | |
Cla09g00030 | 938 | PANTHER | OS07G0107800 PROTEIN-RELATED | 11 | 866 | - | - | |
Cla09g00030 | 938 | SMART | serkin_6 | 581 | 831 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00030 | 938 | SUPERFAMILY | L domain-like | 394 | 482 | - | - | |
Cla09g00030 | 938 | PANTHER | OS07G0107800 PROTEIN-RELATED | 867 | 923 | - | - | |
Cla09g00030 | 938 | PANTHER | PUTATIVE-RELATED | 11 | 866 | - | - | |
Cla09g00030 | 938 | PANTHER | PUTATIVE-RELATED | 867 | 923 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g00563 | Cla-Chr6:6824405 | Cla09g00030 | Cla-Chr9:339249 | 4.15E-46 | dispersed | |
Cla09g00030 | Cla-Chr9:339249 | Cla09g00033 | Cla-Chr9:350495 | 1.22E-08 | dispersed | |
Cla09g00027 | Cla-Chr9:302620 | Cla09g00030 | Cla-Chr9:339249 | 4.01E-17 | proximal | |
Cla09g00030 | Cla-Chr9:339249 | Cla09g00032 | Cla-Chr9:347106 | 4.75E-20 | proximal | |
Cla03g00756 | Cla-Chr3:9206299 | Cla09g00030 | Cla-Chr9:339249 | 3.68E-28 | transposed | |
Cla06g00140 | Cla-Chr6:1604412 | Cla09g00030 | Cla-Chr9:339249 | 1.58E-86 | transposed | |
Cla07g01284 | Cla-Chr7:29929867 | Cla09g00030 | Cla-Chr9:339249 | 1.46E-20 | transposed | |
Cla11g01631 | Cla-Chr11:30002694 | Cla09g00030 | Cla-Chr9:339249 | 0 | transposed | |
Cla07g01283 | Cla-Chr7:29920451 | Cla09g00030 | Cla-Chr9:339249 | 1.44E-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80772 | PF12819 | Malectin_like | 2.80E-109 | CL0202 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00030 | - | - | csv:101205965 | 1437.55 |