Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00033 | ATGCTACTTTCTCAATTTTCATCTATCCATGCAGTGGAAAATAGATCCAAGAAGATGAAGATAATGGAGTTACCGGGGATCCATTCCCTCTTTGGTTTTTTGCTATGTAGTTTAACTCTTCTACTTCTTGTTCAAGCCCAGGAGCAGACAGGCTTCATTAGTTTAGACTGTGGAATACCAGAGAGTACAGGTTACACTGAAACAACGACCAAGATCGACTATGTTTCTGATGCACCCTACATAAATAGTGGTGTAAGTGGAAGCGTAGCTTCAATTTATGAAGACACCTACCAAAGGCAAATGCTCAAACTTAGAAGCTTCCCCCAAGGAATCAGAAATTGTTACAATGTAAGCATTAGAAAGGATACCAAATACTTGATTCGAGCAAGTTTCTTATATGGGAATTATGATAGCCTAAATTCTCTACCAAAGTTTGATCTCTATATTGGGAATAGCTTATGGGAGACAATAAGCTTCACTGAAGTTGGCAAAGATGTTCTCGAAGATCTCATACATGTTACCTCCTCAAATGAAGTTCACATCTGTCTGATCAACACAGGAAATGGGGTGCCATTTATCTCAGCCTTAGAATTTAGACCTTTACTCAACGTCACTTATCAAACAGCCTCAGGATCTTTATCACTGTATTCTCGAATGGATATTGGTTCAACCGAAAATCGAACATACAGGTTCCCTTTTGATGTTTATGATCGCACCTGGGCACCATTTAACTTCAATGCGTGGACACAAGTGAGCACCAATCAAACTGTGGATGCAACTGATCACAACAATCACCAACCGCCATCAGTTGTCATGAAAACTGCCTCCGCCGCAAAAAATGCGAGCAACCCACTGGAAATTTGGTGGGATACAGAAGATTCATCTCGATATTATGTATTTCTCCACTTTGCTGAAGTTGTAGAGCTTCAAGGCAACCAGAGTAGAGGATTCAATATCATGCACAATGAGGATCTTTTTCATGGACCTCTAATTCCAACTTATTTATCTACACAGACCATTTTTCACCACAAACCATTGGATGAAGCAGATAGACATACATTTTCTTTAATTCCAATAGAGAATGCAACACTTCCTCCAATCTTTAATGCTTTCGAGATATATTCAGTGAAAGATATATCAGAGTTAGAGGCAGACAAAGGAGACGTGGATGCAATTACCAATATCAAGTCAACCTATGCGGTAAAGAAGGATTGGCAAGGAGATCCATGCGTGCCAATGGGATATCCCTGGAGTGGATTAAATTGTAGCAATGAAGCTGCACCAAGAATCATTTCCTTGAACTTATCTGCAAGTAGACTGAAAGGTGAAATATCTTCTTACATATCCAGTCTAACCATGTTGCAAACTTTGGACTTGTCAAACAATAATTTGACAGGGCAAGTGCCTGATTTCCTGTCTAGTTTGTCAGACCTCAAAACTCTGAACCTAGGCAACAACAAGCTCTCAGGTCCAATTCCGGCTGAGCTTTTGAAAAGATCCAATGATGGCTCACTATCATTAAGTGTGGGAGGTAACCAAAATCTCGATGGATGTACATCAGATCCATGTCCAAAGAATGAGAAGAAGAAGAACAACATCATCATTCCAATTGTAGCATCAATTGGTGGATTCCTAGTTGTCGTTACATTTGCTGCAGTAACCTTTTGGATCATCAAATCTCGAAAGAAACAAGAAGGTAAAAATGTTGTCTCAGTGGTGGATAAGTCAGAAACTAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGGCGTCAATTTACATATTCTGAGGTGGTGAAAATAACAAACAATTTCAGTAAAGTTTTGGGTAAAGGAGGTTTCGGAAAGGTCTATTATGGTGTCATTGATGAAATTCAAGTGGCAGTGAAGATGTTGTCTTTATCATCACCACAAGGATATCGGCAATTTCAAGCAGAGGTTACCCATCTTATGAGAGTTCACCACAGAAACTTGACCAGCCTCGTTGGATATTTGAATGAAGGAGATCACCTTGGCCTAATTTACGAGTACATGGCCAATGGAGATTTGGCCAAACACCTTTCAGAGAGGAGTGTACATATCCTAAGCTGGGAAAACAGACTTCGAATAGCAATGGATGCAGCTCAAGGATTGGAGTACTTGCATTATGGTTGTAAGCCACCCATAGTTCACAGAGATGTGAAAACAACAAACATCTTATTGACAGATAATTTCCAAGGCAAACTTGCAGATTTTGGTCTTTCCAAAAGCTTCCCCAGAGATGGAAACACCCACATGTCCACGGTTGTTGCTGGCACTCCTGGTTACCTTGATCCAGAGTACTACGTATCAAACAGGCTAACAGAGAAAAGCGATGTATACAGCTTTGGGATAGCTCTATTGGAGATAATCAGTTGCAAACCAGTAATATCAAGAACCGGAGATACACCACATATAGCTAAATGGGTTACCTCTTTGCTGGCGCGAGGAGATATCCAGAGTATAGTTGATCCCAGATTAGAAGGGCAATATGAAACAAACTCTGTTTGGAAGACGGTGGAAGTGGCAATGGCTTGTGTAGCGGCAAATTCCAGTAGAAGGCCGACGATGAGCGACATTGTGGCGGAACTTAAAGATTGTTTAGCTACGGAATTGAGCCGAAAGCTTGAGAATCGTTCGCTTGATTCGACAAATTCCACTGAAATGAGGTCCATCTCTGTAGGATTTAATGCTTCCGATTCAAATCCCATGGCGAGTAATGGTTCTTCAGGCTTTGTTAGTCTAGATTGTGGTCTACAAGCAAATTCATCAGGCTACATCGATCCAAAGACAAATATTAAGTATATATCAGATGCAAGCTTTATAAACACAGGGGAAAGTAGAAGCGTAGCACCTGAGTTCAAGAACTATGAACAATCACACTGGACTCTAAGAAGTTTTCCTCAAGAAATTAGGAACTGTTACAATAAAAGCGCCATTAAAGACACCACGTATTTGATTCGAGCAAGCTTCTTATACGGAAATTATGATGGGCTCAATAAAACTCCACGGTTTGATCTGTATTTGGGCAATACTCGATGGACAACAGTGGATGATAGCTACTACTACACAGAAATGGTGCACACAACTTCAATAGATAAATTGCCAATCTGTCTTATCAACATTGGCTATGGAATACCATTCATCTCAACATTAGACTTTAGAGAGCTTCCTTATCTCATTTACTATGCTCTATCAGTTTCCTTGCGCCTTTACCATCGGTACGATATGGGGTCAATAACAAATGAGCAATACAGGTTTCCCGATGATACTTATGATCGAGTGTGGGAAACATATGAAGATGGTAACTATGCACAACTAAGTACCTCGGATCCTGTAGTTACTGCTAACTCTGAGTATACACCGGCCGTAGTCATGAAAACTGCTGCAACTCCAAAGAATGGGACCAAGTACCTTAATTTCTCATGGGACTCCAGAAACGAAAGTGATAGATTTTATGCATATTCCCACTTTGCTGAACTTGAAAAGCTTCAAAGAAACCAATTTAGAGGATTTAATATCACTCATAATGGAAATTATAGGGATGGACCTATTATTCCTAAATATTTAAGCACAACATCATCTTTTTTAATCCTATCATCTCTATCAGGATCAAGACATGAATTATCATTCGTCCCAATACAAAATTCAACTCTTCCTCCTATCATCAATGCTTTAGAAATTTATATTGAGATGGAGATCTCAGAACTAGAATCATACAGTGGAGATGTGGATGCAATCAGTCATGTTCAGTCAACTTATGGAATAATAAAAAATTGGGAAGGAGACCCATGTATGCCAAGTGGATATCCATGGAGTGGTTTGAGTTGCAGCTCTGATCCAGTCCCTAGAATCACATCACTGGATTTGTCAAACAATTACTTGACAGGAGAAGTACCTAGATTTCTGTCCCAGTTGGAACACCTCAAAATCCTAAACTTAGAGAATAACAATCTCACAGGCTCTCTTCCACCAGAGCTTATCAAAAAACAGAAGAACCGTTCACTTACATTAAGAATACAAGGAAATCCAAATTTATGTACCTTAGAGCCATGCACAAAGATGACACCTGAGAGCAAGAAAAGCAACAGCATAATCATTCCAGCAGTAGCATCAGTGGGTGGATTGCTTGCATTCCTCATAATTGCAGCAATTATTTATTGGATTGCTAAATCAAATAAGAAACAACAAGGTGAGGTTGCTTTGATAGTGGATCCTGCAAAGACTTACACCCATTTAGGCAGTTCCTTGGAGACAAGGAGACAACAGTTTACTTATGCAGAAGTTGTGAGGATGACCAACAATTTTGAGAGGGTTCTTGGTAAGGGAGGTTTTGGGATGGTTTACTATGGAGTTCTAGATGACACTCAAGTGGCTGTGAAGATGATTTCTCCATCAGCTGTACAAGGCTATCATCAGTTTCAAGCAGAGGCATGTGCCTAA | 4461 | 39.9 | MLLSQFSSIHAVENRSKKMKIMELPGIHSLFGFLLCSLTLLLLVQAQEQTGFISLDCGIPESTGYTETTTKIDYVSDAPYINSGVSGSVASIYEDTYQRQMLKLRSFPQGIRNCYNVSIRKDTKYLIRASFLYGNYDSLNSLPKFDLYIGNSLWETISFTEVGKDVLEDLIHVTSSNEVHICLINTGNGVPFISALEFRPLLNVTYQTASGSLSLYSRMDIGSTENRTYRFPFDVYDRTWAPFNFNAWTQVSTNQTVDATDHNNHQPPSVVMKTASAAKNASNPLEIWWDTEDSSRYYVFLHFAEVVELQGNQSRGFNIMHNEDLFHGPLIPTYLSTQTIFHHKPLDEADRHTFSLIPIENATLPPIFNAFEIYSVKDISELEADKGDVDAITNIKSTYAVKKDWQGDPCVPMGYPWSGLNCSNEAAPRIISLNLSASRLKGEISSYISSLTMLQTLDLSNNNLTGQVPDFLSSLSDLKTLNLGNNKLSGPIPAELLKRSNDGSLSLSVGGNQNLDGCTSDPCPKNEKKKNNIIIPIVASIGGFLVVVTFAAVTFWIIKSRKKQEGKNVVSVVDKSETNSQFGNSLEVRRRQFTYSEVVKITNNFSKVLGKGGFGKVYYGVIDEIQVAVKMLSLSSPQGYRQFQAEVTHLMRVHHRNLTSLVGYLNEGDHLGLIYEYMANGDLAKHLSERSVHILSWENRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTDNFQGKLADFGLSKSFPRDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCKPVISRTGDTPHIAKWVTSLLARGDIQSIVDPRLEGQYETNSVWKTVEVAMACVAANSSRRPTMSDIVAELKDCLATELSRKLENRSLDSTNSTEMRSISVGFNASDSNPMASNGSSGFVSLDCGLQANSSGYIDPKTNIKYISDASFINTGESRSVAPEFKNYEQSHWTLRSFPQEIRNCYNKSAIKDTTYLIRASFLYGNYDGLNKTPRFDLYLGNTRWTTVDDSYYYTEMVHTTSIDKLPICLINIGYGIPFISTLDFRELPYLIYYALSVSLRLYHRYDMGSITNEQYRFPDDTYDRVWETYEDGNYAQLSTSDPVVTANSEYTPAVVMKTAATPKNGTKYLNFSWDSRNESDRFYAYSHFAELEKLQRNQFRGFNITHNGNYRDGPIIPKYLSTTSSFLILSSLSGSRHELSFVPIQNSTLPPIINALEIYIEMEISELESYSGDVDAISHVQSTYGIIKNWEGDPCMPSGYPWSGLSCSSDPVPRITSLDLSNNYLTGEVPRFLSQLEHLKILNLENNNLTGSLPPELIKKQKNRSLTLRIQGNPNLCTLEPCTKMTPESKKSNSIIIPAVASVGGLLAFLIIAAIIYWIAKSNKKQQGEVALIVDPAKTYTHLGSSLETRRQQFTYAEVVRMTNNFERVLGKGGFGMVYYGVLDDTQVAVKMISPSAVQGYHQFQAEACA | 1486 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 350495 | 359910 | + | ClCG09G000390.2 | Cla09g00033 | 279453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00033 | 1486 | ProSiteProfiles | Leucine-rich repeat profile. | 453 | 475 | IPR001611 | GO:0005515 | |
Cla09g00033 | 1486 | PANTHER | PUTATIVE-RELATED | 35 | 911 | - | - | |
Cla09g00033 | 1486 | PANTHER | PUTATIVE-RELATED | 915 | 1484 | - | - | |
Cla09g00033 | 1486 | ProSiteProfiles | Protein kinase domain profile. | 603 | 874 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00033 | 1486 | SUPERFAMILY | Protein kinase-like (PK-like) | 1424 | 1485 | IPR011009 | - | |
Cla09g00033 | 1486 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 722 | 734 | IPR008271 | GO:0004672|GO:0006468 | |
Cla09g00033 | 1486 | SUPERFAMILY | L domain-like | 394 | 1357 | - | - | |
Cla09g00033 | 1486 | PANTHER | OS07G0107800 PROTEIN-RELATED | 915 | 1484 | - | - | |
Cla09g00033 | 1486 | PANTHER | OS07G0107800 PROTEIN-RELATED | 35 | 911 | - | - | |
Cla09g00033 | 1486 | Pfam | Malectin-like domain | 921 | 1235 | IPR024788 | - | |
Cla09g00033 | 1486 | Pfam | Malectin-like domain | 55 | 376 | IPR024788 | - | |
Cla09g00033 | 1486 | Gene3D | Transferase(Phosphotransferase) domain 1 | 678 | 895 | - | - | |
Cla09g00033 | 1486 | Gene3D | Phosphorylase Kinase; domain 1 | 590 | 677 | - | - | |
Cla09g00033 | 1486 | ProSitePatterns | Protein kinases ATP-binding region signature. | 609 | 630 | IPR017441 | GO:0005524 | |
Cla09g00033 | 1486 | PRINTS | Leucine-rich repeat signature | 454 | 467 | - | - | |
Cla09g00033 | 1486 | PRINTS | Leucine-rich repeat signature | 475 | 488 | - | - | |
Cla09g00033 | 1486 | Pfam | Protein tyrosine and serine/threonine kinase | 605 | 870 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g00033 | 1486 | Gene3D | Phosphorylase Kinase; domain 1 | 1421 | 1486 | - | - | |
Cla09g00033 | 1486 | SMART | serkin_6 | 603 | 874 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00033 | 1486 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1446 | 1467 | IPR017441 | GO:0005524 | |
Cla09g00033 | 1486 | Pfam | Leucine Rich Repeat | 1314 | 1332 | IPR001611 | GO:0005515 | |
Cla09g00033 | 1486 | Pfam | Leucine Rich repeats (2 copies) | 452 | 488 | IPR025875 | - | |
Cla09g00033 | 1486 | Gene3D | Ribonuclease Inhibitor | 389 | 508 | IPR032675 | - | |
Cla09g00033 | 1486 | Gene3D | Ribonuclease Inhibitor | 1251 | 1360 | IPR032675 | - | |
Cla09g00033 | 1486 | SMART | LRR_typ_2 | 475 | 499 | IPR003591 | - | |
Cla09g00033 | 1486 | SMART | LRR_typ_2 | 451 | 474 | IPR003591 | - | |
Cla09g00033 | 1486 | SMART | LRR_typ_2 | 1312 | 1336 | IPR003591 | - | |
Cla09g00033 | 1486 | SUPERFAMILY | Protein kinase-like (PK-like) | 582 | 870 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01283 | Cla-Chr7:29920451 | Cla09g00033 | Cla-Chr9:350495 | 9.14E-15 | dispersed | |
Cla09g00027 | Cla-Chr9:302620 | Cla09g00033 | Cla-Chr9:350495 | 4.95E-91 | dispersed | |
Cla09g00030 | Cla-Chr9:339249 | Cla09g00033 | Cla-Chr9:350495 | 1.22E-08 | dispersed | |
Cla09g00033 | Cla-Chr9:350495 | Cla09g00035 | Cla-Chr9:361115 | 0 | dispersed | |
Cla09g00032 | Cla-Chr9:347106 | Cla09g00033 | Cla-Chr9:350495 | 5.03E-14 | tandem | |
Cla09g00033 | Cla-Chr9:350495 | Cla09g00034 | Cla-Chr9:359975 | 2.59E-116 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80774 | PF12819 | Malectin_like | 2.00E-107 | CL0202 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00033 | - | - | csv:101206211 | 1513.82 |