Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00033 ATGCTACTTTCTCAATTTTCATCTATCCATGCAGTGGAAAATAGATCCAAGAAGATGAAGATAATGGAGTTACCGGGGATCCATTCCCTCTTTGGTTTTTTGCTATGTAGTTTAACTCTTCTACTTCTTGTTCAAGCCCAGGAGCAGACAGGCTTCATTAGTTTAGACTGTGGAATACCAGAGAGTACAGGTTACACTGAAACAACGACCAAGATCGACTATGTTTCTGATGCACCCTACATAAATAGTGGTGTAAGTGGAAGCGTAGCTTCAATTTATGAAGACACCTACCAAAGGCAAATGCTCAAACTTAGAAGCTTCCCCCAAGGAATCAGAAATTGTTACAATGTAAGCATTAGAAAGGATACCAAATACTTGATTCGAGCAAGTTTCTTATATGGGAATTATGATAGCCTAAATTCTCTACCAAAGTTTGATCTCTATATTGGGAATAGCTTATGGGAGACAATAAGCTTCACTGAAGTTGGCAAAGATGTTCTCGAAGATCTCATACATGTTACCTCCTCAAATGAAGTTCACATCTGTCTGATCAACACAGGAAATGGGGTGCCATTTATCTCAGCCTTAGAATTTAGACCTTTACTCAACGTCACTTATCAAACAGCCTCAGGATCTTTATCACTGTATTCTCGAATGGATATTGGTTCAACCGAAAATCGAACATACAGGTTCCCTTTTGATGTTTATGATCGCACCTGGGCACCATTTAACTTCAATGCGTGGACACAAGTGAGCACCAATCAAACTGTGGATGCAACTGATCACAACAATCACCAACCGCCATCAGTTGTCATGAAAACTGCCTCCGCCGCAAAAAATGCGAGCAACCCACTGGAAATTTGGTGGGATACAGAAGATTCATCTCGATATTATGTATTTCTCCACTTTGCTGAAGTTGTAGAGCTTCAAGGCAACCAGAGTAGAGGATTCAATATCATGCACAATGAGGATCTTTTTCATGGACCTCTAATTCCAACTTATTTATCTACACAGACCATTTTTCACCACAAACCATTGGATGAAGCAGATAGACATACATTTTCTTTAATTCCAATAGAGAATGCAACACTTCCTCCAATCTTTAATGCTTTCGAGATATATTCAGTGAAAGATATATCAGAGTTAGAGGCAGACAAAGGAGACGTGGATGCAATTACCAATATCAAGTCAACCTATGCGGTAAAGAAGGATTGGCAAGGAGATCCATGCGTGCCAATGGGATATCCCTGGAGTGGATTAAATTGTAGCAATGAAGCTGCACCAAGAATCATTTCCTTGAACTTATCTGCAAGTAGACTGAAAGGTGAAATATCTTCTTACATATCCAGTCTAACCATGTTGCAAACTTTGGACTTGTCAAACAATAATTTGACAGGGCAAGTGCCTGATTTCCTGTCTAGTTTGTCAGACCTCAAAACTCTGAACCTAGGCAACAACAAGCTCTCAGGTCCAATTCCGGCTGAGCTTTTGAAAAGATCCAATGATGGCTCACTATCATTAAGTGTGGGAGGTAACCAAAATCTCGATGGATGTACATCAGATCCATGTCCAAAGAATGAGAAGAAGAAGAACAACATCATCATTCCAATTGTAGCATCAATTGGTGGATTCCTAGTTGTCGTTACATTTGCTGCAGTAACCTTTTGGATCATCAAATCTCGAAAGAAACAAGAAGGTAAAAATGTTGTCTCAGTGGTGGATAAGTCAGAAACTAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGGCGTCAATTTACATATTCTGAGGTGGTGAAAATAACAAACAATTTCAGTAAAGTTTTGGGTAAAGGAGGTTTCGGAAAGGTCTATTATGGTGTCATTGATGAAATTCAAGTGGCAGTGAAGATGTTGTCTTTATCATCACCACAAGGATATCGGCAATTTCAAGCAGAGGTTACCCATCTTATGAGAGTTCACCACAGAAACTTGACCAGCCTCGTTGGATATTTGAATGAAGGAGATCACCTTGGCCTAATTTACGAGTACATGGCCAATGGAGATTTGGCCAAACACCTTTCAGAGAGGAGTGTACATATCCTAAGCTGGGAAAACAGACTTCGAATAGCAATGGATGCAGCTCAAGGATTGGAGTACTTGCATTATGGTTGTAAGCCACCCATAGTTCACAGAGATGTGAAAACAACAAACATCTTATTGACAGATAATTTCCAAGGCAAACTTGCAGATTTTGGTCTTTCCAAAAGCTTCCCCAGAGATGGAAACACCCACATGTCCACGGTTGTTGCTGGCACTCCTGGTTACCTTGATCCAGAGTACTACGTATCAAACAGGCTAACAGAGAAAAGCGATGTATACAGCTTTGGGATAGCTCTATTGGAGATAATCAGTTGCAAACCAGTAATATCAAGAACCGGAGATACACCACATATAGCTAAATGGGTTACCTCTTTGCTGGCGCGAGGAGATATCCAGAGTATAGTTGATCCCAGATTAGAAGGGCAATATGAAACAAACTCTGTTTGGAAGACGGTGGAAGTGGCAATGGCTTGTGTAGCGGCAAATTCCAGTAGAAGGCCGACGATGAGCGACATTGTGGCGGAACTTAAAGATTGTTTAGCTACGGAATTGAGCCGAAAGCTTGAGAATCGTTCGCTTGATTCGACAAATTCCACTGAAATGAGGTCCATCTCTGTAGGATTTAATGCTTCCGATTCAAATCCCATGGCGAGTAATGGTTCTTCAGGCTTTGTTAGTCTAGATTGTGGTCTACAAGCAAATTCATCAGGCTACATCGATCCAAAGACAAATATTAAGTATATATCAGATGCAAGCTTTATAAACACAGGGGAAAGTAGAAGCGTAGCACCTGAGTTCAAGAACTATGAACAATCACACTGGACTCTAAGAAGTTTTCCTCAAGAAATTAGGAACTGTTACAATAAAAGCGCCATTAAAGACACCACGTATTTGATTCGAGCAAGCTTCTTATACGGAAATTATGATGGGCTCAATAAAACTCCACGGTTTGATCTGTATTTGGGCAATACTCGATGGACAACAGTGGATGATAGCTACTACTACACAGAAATGGTGCACACAACTTCAATAGATAAATTGCCAATCTGTCTTATCAACATTGGCTATGGAATACCATTCATCTCAACATTAGACTTTAGAGAGCTTCCTTATCTCATTTACTATGCTCTATCAGTTTCCTTGCGCCTTTACCATCGGTACGATATGGGGTCAATAACAAATGAGCAATACAGGTTTCCCGATGATACTTATGATCGAGTGTGGGAAACATATGAAGATGGTAACTATGCACAACTAAGTACCTCGGATCCTGTAGTTACTGCTAACTCTGAGTATACACCGGCCGTAGTCATGAAAACTGCTGCAACTCCAAAGAATGGGACCAAGTACCTTAATTTCTCATGGGACTCCAGAAACGAAAGTGATAGATTTTATGCATATTCCCACTTTGCTGAACTTGAAAAGCTTCAAAGAAACCAATTTAGAGGATTTAATATCACTCATAATGGAAATTATAGGGATGGACCTATTATTCCTAAATATTTAAGCACAACATCATCTTTTTTAATCCTATCATCTCTATCAGGATCAAGACATGAATTATCATTCGTCCCAATACAAAATTCAACTCTTCCTCCTATCATCAATGCTTTAGAAATTTATATTGAGATGGAGATCTCAGAACTAGAATCATACAGTGGAGATGTGGATGCAATCAGTCATGTTCAGTCAACTTATGGAATAATAAAAAATTGGGAAGGAGACCCATGTATGCCAAGTGGATATCCATGGAGTGGTTTGAGTTGCAGCTCTGATCCAGTCCCTAGAATCACATCACTGGATTTGTCAAACAATTACTTGACAGGAGAAGTACCTAGATTTCTGTCCCAGTTGGAACACCTCAAAATCCTAAACTTAGAGAATAACAATCTCACAGGCTCTCTTCCACCAGAGCTTATCAAAAAACAGAAGAACCGTTCACTTACATTAAGAATACAAGGAAATCCAAATTTATGTACCTTAGAGCCATGCACAAAGATGACACCTGAGAGCAAGAAAAGCAACAGCATAATCATTCCAGCAGTAGCATCAGTGGGTGGATTGCTTGCATTCCTCATAATTGCAGCAATTATTTATTGGATTGCTAAATCAAATAAGAAACAACAAGGTGAGGTTGCTTTGATAGTGGATCCTGCAAAGACTTACACCCATTTAGGCAGTTCCTTGGAGACAAGGAGACAACAGTTTACTTATGCAGAAGTTGTGAGGATGACCAACAATTTTGAGAGGGTTCTTGGTAAGGGAGGTTTTGGGATGGTTTACTATGGAGTTCTAGATGACACTCAAGTGGCTGTGAAGATGATTTCTCCATCAGCTGTACAAGGCTATCATCAGTTTCAAGCAGAGGCATGTGCCTAA 4461 39.9 MLLSQFSSIHAVENRSKKMKIMELPGIHSLFGFLLCSLTLLLLVQAQEQTGFISLDCGIPESTGYTETTTKIDYVSDAPYINSGVSGSVASIYEDTYQRQMLKLRSFPQGIRNCYNVSIRKDTKYLIRASFLYGNYDSLNSLPKFDLYIGNSLWETISFTEVGKDVLEDLIHVTSSNEVHICLINTGNGVPFISALEFRPLLNVTYQTASGSLSLYSRMDIGSTENRTYRFPFDVYDRTWAPFNFNAWTQVSTNQTVDATDHNNHQPPSVVMKTASAAKNASNPLEIWWDTEDSSRYYVFLHFAEVVELQGNQSRGFNIMHNEDLFHGPLIPTYLSTQTIFHHKPLDEADRHTFSLIPIENATLPPIFNAFEIYSVKDISELEADKGDVDAITNIKSTYAVKKDWQGDPCVPMGYPWSGLNCSNEAAPRIISLNLSASRLKGEISSYISSLTMLQTLDLSNNNLTGQVPDFLSSLSDLKTLNLGNNKLSGPIPAELLKRSNDGSLSLSVGGNQNLDGCTSDPCPKNEKKKNNIIIPIVASIGGFLVVVTFAAVTFWIIKSRKKQEGKNVVSVVDKSETNSQFGNSLEVRRRQFTYSEVVKITNNFSKVLGKGGFGKVYYGVIDEIQVAVKMLSLSSPQGYRQFQAEVTHLMRVHHRNLTSLVGYLNEGDHLGLIYEYMANGDLAKHLSERSVHILSWENRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTDNFQGKLADFGLSKSFPRDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCKPVISRTGDTPHIAKWVTSLLARGDIQSIVDPRLEGQYETNSVWKTVEVAMACVAANSSRRPTMSDIVAELKDCLATELSRKLENRSLDSTNSTEMRSISVGFNASDSNPMASNGSSGFVSLDCGLQANSSGYIDPKTNIKYISDASFINTGESRSVAPEFKNYEQSHWTLRSFPQEIRNCYNKSAIKDTTYLIRASFLYGNYDGLNKTPRFDLYLGNTRWTTVDDSYYYTEMVHTTSIDKLPICLINIGYGIPFISTLDFRELPYLIYYALSVSLRLYHRYDMGSITNEQYRFPDDTYDRVWETYEDGNYAQLSTSDPVVTANSEYTPAVVMKTAATPKNGTKYLNFSWDSRNESDRFYAYSHFAELEKLQRNQFRGFNITHNGNYRDGPIIPKYLSTTSSFLILSSLSGSRHELSFVPIQNSTLPPIINALEIYIEMEISELESYSGDVDAISHVQSTYGIIKNWEGDPCMPSGYPWSGLSCSSDPVPRITSLDLSNNYLTGEVPRFLSQLEHLKILNLENNNLTGSLPPELIKKQKNRSLTLRIQGNPNLCTLEPCTKMTPESKKSNSIIIPAVASVGGLLAFLIIAAIIYWIAKSNKKQQGEVALIVDPAKTYTHLGSSLETRRQQFTYAEVVRMTNNFERVLGKGGFGMVYYGVLDDTQVAVKMISPSAVQGYHQFQAEACA 1486
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 350495 359910 + ClCG09G000390.2 Cla09g00033 279453
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00033 1486 ProSiteProfiles Leucine-rich repeat profile. 453 475 IPR001611 GO:0005515
Cla09g00033 1486 PANTHER PUTATIVE-RELATED 35 911 - -
Cla09g00033 1486 PANTHER PUTATIVE-RELATED 915 1484 - -
Cla09g00033 1486 ProSiteProfiles Protein kinase domain profile. 603 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00033 1486 SUPERFAMILY Protein kinase-like (PK-like) 1424 1485 IPR011009 -
Cla09g00033 1486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Cla09g00033 1486 SUPERFAMILY L domain-like 394 1357 - -
Cla09g00033 1486 PANTHER OS07G0107800 PROTEIN-RELATED 915 1484 - -
Cla09g00033 1486 PANTHER OS07G0107800 PROTEIN-RELATED 35 911 - -
Cla09g00033 1486 Pfam Malectin-like domain 921 1235 IPR024788 -
Cla09g00033 1486 Pfam Malectin-like domain 55 376 IPR024788 -
Cla09g00033 1486 Gene3D Transferase(Phosphotransferase) domain 1 678 895 - -
Cla09g00033 1486 Gene3D Phosphorylase Kinase; domain 1 590 677 - -
Cla09g00033 1486 ProSitePatterns Protein kinases ATP-binding region signature. 609 630 IPR017441 GO:0005524
Cla09g00033 1486 PRINTS Leucine-rich repeat signature 454 467 - -
Cla09g00033 1486 PRINTS Leucine-rich repeat signature 475 488 - -
Cla09g00033 1486 Pfam Protein tyrosine and serine/threonine kinase 605 870 IPR001245 GO:0004672|GO:0006468
Cla09g00033 1486 Gene3D Phosphorylase Kinase; domain 1 1421 1486 - -
Cla09g00033 1486 SMART serkin_6 603 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00033 1486 ProSitePatterns Protein kinases ATP-binding region signature. 1446 1467 IPR017441 GO:0005524
Cla09g00033 1486 Pfam Leucine Rich Repeat 1314 1332 IPR001611 GO:0005515
Cla09g00033 1486 Pfam Leucine Rich repeats (2 copies) 452 488 IPR025875 -
Cla09g00033 1486 Gene3D Ribonuclease Inhibitor 389 508 IPR032675 -
Cla09g00033 1486 Gene3D Ribonuclease Inhibitor 1251 1360 IPR032675 -
Cla09g00033 1486 SMART LRR_typ_2 475 499 IPR003591 -
Cla09g00033 1486 SMART LRR_typ_2 451 474 IPR003591 -
Cla09g00033 1486 SMART LRR_typ_2 1312 1336 IPR003591 -
Cla09g00033 1486 SUPERFAMILY Protein kinase-like (PK-like) 582 870 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01283 Cla-Chr7:29920451 Cla09g00033 Cla-Chr9:350495 9.14E-15 dispersed
Cla09g00027 Cla-Chr9:302620 Cla09g00033 Cla-Chr9:350495 4.95E-91 dispersed
Cla09g00030 Cla-Chr9:339249 Cla09g00033 Cla-Chr9:350495 1.22E-08 dispersed
Cla09g00033 Cla-Chr9:350495 Cla09g00035 Cla-Chr9:361115 0 dispersed
Cla09g00032 Cla-Chr9:347106 Cla09g00033 Cla-Chr9:350495 5.03E-14 tandem
Cla09g00033 Cla-Chr9:350495 Cla09g00034 Cla-Chr9:359975 2.59E-116 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80774 PF12819 Malectin_like 2.00E-107 CL0202 Cla PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00033 - - csv:101206211 1513.82