Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00055 ATGAGCTTACTTGAAAGGCAGCTCTTGTTGCTGTCTGTGAGAAGCACAAAGAGAAAGAGAAAGAGAAAGACAGGAAGGCAGAGGAAATCTTTGTCCAAAATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCATCCCGAAACCTTCATGGACAAGCGTCGGCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCAAGTTGGACTGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCGTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGATCACTGAGACATTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTTACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTTTCAACTACTCACCGACGAAGCCTTTTATCCGTCGGTCAGATTCACAAGTTCCAACTTCCACGACCTTCCTCCTCTCTCTCCGTCGTCTCCCCCAAATCTCCTCTCGAAATTGCCGGAATCTCCGCCGCCCCGATGACCACCTACGGCACGATCCCCACCTCCGCCGCTCCTGGAACTTCCTCCGACCTTGACTTTGTCTCCCGCGGCAAACAGCGTCTCAAAGCCGGCCTCGCCACTCGCGTTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCACTCTCCCTTTCAACTTCCGCGACACTTTCTCTCGCATCAAAACCAACGTCGCCTACTTCCGTATGAATTATGTCATTATCGTCCTCTTGATTCTCTTCTTGAGCCTCCTCTGGCATCCGATCTCCCTCATCGTCTTCACCGCCATGCTCGCCGTTTGGTTGTTCCTCTATTTCCTTCGAGATGAGCCTCTGATCCTCTTCGGCTATTTGATTAACGATCGACTGGTGACGGCTGTGCTCTTGGTGTTCACACTTGTGTTCTTGTTTCTGACCAACGCGACGCTCAATATCTTGTTGTCGCTTCTGATCGCTGCTGTGCTGGTTCTGATCCACGCCGCTGTGAGGAAGACGGATGATCTGTTCTTGCATGAAGGAGCTACTACAGTCTACACTTTCGATTCGGATGTTCCTGGAACTTCAGTTTCCCTTTATTCATCGTAA 2187 44.81 MSLLERQLLLLSVRSTKRKRKRKTGRQRKSLSKMDSLWDVLVVTAIFLTTIILYRNCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDHPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQASWTAKRNMVKLVKKIIQERKSCGISRVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAEENLKMKGLKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVSTTHRRSLLSVGQIHKFQLPRPSSSLSVVSPKSPLEIAGISAAPMTTYGTIPTSAAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPFNFRDTFSRIKTNVAYFRMNYVIIVLLILFLSLLWHPISLIVFTAMLAVWLFLYFLRDEPLILFGYLINDRLVTAVLLVFTLVFLFLTNATLNILLSLLIAAVLVLIHAAVRKTDDLFLHEGATTVYTFDSDVPGTSVSLYSS 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 546635 554204 - ClCG09G000620.1 Cla09g00055 279475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00055 728 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 47 488 - -
Cla09g00055 728 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 Gene3D Cytochrome P450 63 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 Pfam PRA1 family protein 567 706 IPR004895 -
Cla09g00055 728 SUPERFAMILY Cytochrome P450 67 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00055 728 PANTHER CYTOCHROME P450 26 47 488 - -
Cla09g00055 728 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cla09g00055 728 Pfam Cytochrome P450 70 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01645 Cla-Chr2:31245052 Cla09g00055 Cla-Chr9:546635 2.24E-41 dispersed
Cla05g00489 Cla-Chr5:4416110 Cla09g00055 Cla-Chr9:546635 9.49E-26 dispersed
Cla07g00059 Cla-Chr7:656919 Cla09g00055 Cla-Chr9:546635 6.60E-34 dispersed
Cla07g00443 Cla-Chr7:6006196 Cla09g00055 Cla-Chr9:546635 2.08E-22 dispersed
Cla09g00055 Cla-Chr9:546635 Cla05g02039 Cla-Chr5:32102232 4.81E-73 dispersed
Cla01g01946 Cla-Chr1:34126032 Cla09g00055 Cla-Chr9:546635 1.63E-173 transposed
Cla06g00385 Cla-Chr6:4730323 Cla09g00055 Cla-Chr9:546635 2.64E-84 transposed
Cla07g00388 Cla-Chr7:4774307 Cla09g00055 Cla-Chr9:546635 1.14E-114 transposed
Cla07g00867 Cla-Chr7:24087472 Cla09g00055 Cla-Chr9:546635 7.23E-94 transposed
Cla07g01299 Cla-Chr7:30128051 Cla09g00055 Cla-Chr9:546635 0 transposed
Cla11g00461 Cla-Chr11:5269868 Cla09g00055 Cla-Chr9:546635 5.80E-89 transposed
Cla03g01504 Cla-Chr3:30639680 Cla09g00055 Cla-Chr9:546635 1.90E-38 wgd
Cla07g01297 Cla-Chr7:30103830 Cla09g00055 Cla-Chr9:546635 6.92E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00055 K12638 - csv:101217830 1106.28