Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00071 | ATGAAAATCGAGTCGATGAGACGGGGAAGGATAAGGGAGAGGCTCCGGCGAAGCCATCTATATACGTTCGCTTGCCTTCGGGCAGACAGCACGCGGGAGGTTGACAATTCAAATCCGTTAACAGGACCTGGCTTCTCACGAACTGTCTGTTGTAATCAACCTGAAGTCCATGAGAAAAAGCCATTGAAATACTGCTCGAATTACATATCCACGACCAAATATAATGTTCTTTCTTTCTTGCCTAAGGCTCTCTTTGAGCAATTCCGGAGGGTTGCCAATTTGTACTTCCTTTTGGCTGCATTGTTATCGCTCACACCAGTTGCCCCATTTTCTGCCATGAGCATGATTGCTCCTTTGGTATTTGTTGTTGGGCTCAGTATGGCTAAAGAAGCTCTTGAGGACTGGCGTCGATTTGTGCAGGATATGAAGGTTAATCTCAGGAAAGTGAATGTCCACAAAGGGGAAGGTGTTTTTGGTTATAGACCATGGCACAAGATTCGAGTAGGAGATATAGTGAAAGTAGAGAAGGATCAGTTCTTTCCAGCCGATCTGCTTCTCTTGTCATCGTGCTATGAGGACGGTATATGTTATGTGGAAACGATGAATTTGGATGGCGAGACAAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCTTTGGATGATGATGCAACTTTCAAAGATTTTACTGGAAAAATTTACTGTGAAGATCCAAACCCGAATCTTTACACCTTTGTAGGTAACTTTGAGTATGATCGGCAGATTTATCCTCTTGATCCTAATCAGATTCTCCTCAGAGATTCAAAATTGAGGAATACAGCTTATGCCTATGGGGTGGTGATATTTACTGGACATGATAGCAAAGTCATGCAGAATGCTACAAAATCCCCTTCGAAAAGAAGTAGAATAGAGAGAAAAATGGACAAAATTATTTACATCCTTTTTACTCTCCTTATATTGATCTCATCAATAAGCTCAATAGGTTTTGCTGTGAAAACAAAGTACCAAATGACAGACTGGTGGTATTTACGAACTACTGGTGATGATCACGATCCATTGTACAACCCTCGTAAGCCAACCTTATCAGGACTCATACATCTAATCACTGCTCTTATACTTTATGGATATTTGATACCCATCTCGTTATATGTTTCCATCGAGGTTGTTAAGGTTCTGCAAGCTTCCTTCATTAACCAGGATATTAACATGTATTGTGAGGAGACTGGCAATCCAGCTCGAGCTCGAACTTCAAACTTGAACGAGGAGTTGGGTCAGGTAGACACAATCCTATCCGACAAAACAGGCACTTTGACTTGCAACCAGATGGACTTTCTGAAATGTTCCATTGCTGGCACTGCATATGGTGTTAAATCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATATGACTTTGAGGAGCAGGACGGAGAATATTCTGATGTCCAAGGGCAAAAGAATAGCCAACAGCCTTCGATGCCAAATAGCAGAGCAGGGTCCGAGATCGAACTGGAGACTGTTGTTACTTCAAATGATGGCAAGGATCAGAAGTCTGCCATAAAGTATTTTAGCTTTGAGGACAGCCGCCTAACAGGTGGAAACTGGTTGAATGAGCCCAATCATGATGTTCTTCTATTATTCTTCCGAATTTTGGCAATTTGTCACACTGCAATTCCCGAGCTGAATGAGGAGACTGGTGTTTATACATATGAGGCAGAGTCCCCGGATGAAGGTGCTTTTCTTGTTGCAGCAAGAGAATTTGGTTTTGAATTTTGTAAGAGAACACAATCAACCTTGGTTGTCCGTGAAAGATATCCTTCACCTGACCAAGTGGTTGAAAGGGAATACAAAATTTTGAATCTTTTGGATTTCACAAGCAAGAGAAAGAGAATGTCTGTAATTATTAGGGACGAGGAGGGCCAGATTATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTCGACCGACTATCAAAGAATGGAAGAACATATGAGGAAGCAACCACAAGGCATTTGAATGAATATGGAGAAGCAGGGCTGCGAACTCTGGCACTTGCTTATAGGAGGCTTGAGGAGGCTGAATATAATGCTTGGAACAACGAGTTTCAGAAGGCGAAGACATCCATTGGAGGAGATAGAGACGCAATGCTCGAGCGAGTATCCGACCTCATGGAGCGAGAATTAATCCTGGTTGGTGCTACTGCTGTGGAGGACAAGTTACAGAATGGGGTGCCCCAATGCATAGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTCTGACAGGAGATAAGATGGAAACTGCCATCAACATAGGATATGCATGCAGTTTACTACGACAGGGAATGAAGCGGATCTGCATATCAGTAAACTCAGATTCCTTAGCACAGGATGGCAAAGAGGCCATGAAAGAAAATATTATGAATCAAATCACCAATGCCTCACAAATGATCAAGCTGGAAAAAGATCCGCATGCTGCATTTGCTTTAATCATTGATGGGAAGACTCTAACTTATGCTCTCGAGGATGATATGAAGCTTCAATTCCTTGGACTCGCTGTTGATTGTGCATCGGTCATTTGCTGTCGAGTCTCCCCCAGGCAGAAGGCACTGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTAGCGATTGGTGATGGTGCAAACGATGTAGGAATGATTCAGGAGGCCGATATTGGTGTCGGTATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTCTCTATAGCTCAATTTCGGTTTCTTGAAAGGCTTCTGGTAGTCCATGGTCATTGGTGCTACAAGAGGATTGCACAAATGATTTGCTATTTCTTCTATAAGAATATTGCATTCGGATTAACGCTATTCTACTTCGAAGCATACGCTGGATTTTCTGGGCAATCAATTTATGATGATTTCTACATGCTATCATTTAATGTCATACTCACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAGCAAGATGTCTCTTCTGAGGTGTGCCTACAGTTCCCTGCGCTTTATCAGCAAGGACCTCGAAACTTGTTCTTTGACTGGCCTCGGATTTTCGGATGGATGGGGAACGCTCTCTACTCATCTCTAGTTACTTTCTTCCTCAATCTCATCATATTTTATGACCAGGCATTCCGCTCAGGCGGCCAAACTGCGGATATGACTGCTGTAGGAACCACCATGTTTACTTGCATCATATGGGCAGTAAATTGCCAGATTGCTCTCACAATGAGCCATTTCACCTGGATCCAACACCTTCTCGTCTGGGGTAGTATCGCCATGTGGTATTTGTTCATCTTACTCTATGGAATGATAATATCCTCTGGGAATGCGTATAAAATCTTTGTTGAAGCACTAGGTCCTGCCCCTGTTTACTGGATAGCCACCATTTTAGTAACAATTACCTGTAATCTCCCATATCTTGCCCACATATCCTTCCAAAGAAGCTTCCATCCAATGGATCATCACATTATCCAAGAAATCAAATACTACAGAAAGGATGTTGAAGATACTCACATGTGGACAAGGGAAAGATCAAAGGCAAGGCAAAAGACCAAGATAGGATTCACAGCCAGAGTAGAAGCAAAGATCAGACAATTGAAAGGAAGGCTGCAAAAGAAGCACTCTTCCCTTGGTGTGCCTCCAAATGCTGCTACTGCTATATCATGA | 3708 | 42.77 | MKIESMRRGRIRERLRRSHLYTFACLRADSTREVDNSNPLTGPGFSRTVCCNQPEVHEKKPLKYCSNYISTTKYNVLSFLPKALFEQFRRVANLYFLLAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWRRFVQDMKVNLRKVNVHKGEGVFGYRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNFEYDRQIYPLDPNQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFTLLILISSISSIGFAVKTKYQMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYCEETGNPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDFEEQDGEYSDVQGQKNSQQPSMPNSRAGSEIELETVVTSNDGKDQKSAIKYFSFEDSRLTGGNWLNEPNHDVLLLFFRILAICHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPDQVVEREYKILNLLDFTSKRKRMSVIIRDEEGQIILLCKGADSIIFDRLSKNGRTYEEATTRHLNEYGEAGLRTLALAYRRLEEAEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISVNSDSLAQDGKEAMKENIMNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKLQFLGLAVDCASVICCRVSPRQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPRNLFFDWPRIFGWMGNALYSSLVTFFLNLIIFYDQAFRSGGQTADMTAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMIISSGNAYKIFVEALGPAPVYWIATILVTITCNLPYLAHISFQRSFHPMDHHIIQEIKYYRKDVEDTHMWTRERSKARQKTKIGFTARVEAKIRQLKGRLQKKHSSLGVPPNAATAIS | 1235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 677972 | 683860 | + | ClCG09G000790.1 | Cla09g00071 | 279491 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00071 | 1235 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1227 | - | - | |
Cla09g00071 | 1235 | SUPERFAMILY | HAD-like | 419 | 933 | IPR036412 | - | |
Cla09g00071 | 1235 | Gene3D | - | 594 | 708 | IPR023299 | GO:0000166 | |
Cla09g00071 | 1235 | Gene3D | - | 124 | 297 | - | - | |
Cla09g00071 | 1235 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 861 | 970 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla09g00071 | 1235 | CDD | P-type_ATPase_APLT_Dnf-like | 66 | 1048 | - | - | |
Cla09g00071 | 1235 | Pfam | Cation transport ATPase (P-type) | 555 | 660 | - | - | |
Cla09g00071 | 1235 | Gene3D | - | 428 | 440 | IPR023214 | - | |
Cla09g00071 | 1235 | Pfam | Phospholipid-translocating ATPase N-terminal | 50 | 116 | IPR032631 | - | |
Cla09g00071 | 1235 | Gene3D | - | 729 | 929 | IPR023214 | - | |
Cla09g00071 | 1235 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1227 | - | - | |
Cla09g00071 | 1235 | Gene3D | - | 441 | 465 | IPR023299 | GO:0000166 | |
Cla09g00071 | 1235 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 59 | 1161 | IPR023298 | - | |
Cla09g00071 | 1235 | SFLD | C1.7: P-type atpase like | 415 | 940 | - | - | |
Cla09g00071 | 1235 | SUPERFAMILY | Calcium ATPase, transduction domain A | 155 | 294 | IPR008250 | - | |
Cla09g00071 | 1235 | MobiDBLite | consensus disorder prediction | 483 | 501 | - | - | |
Cla09g00071 | 1235 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 433 | 439 | IPR018303 | - | |
Cla09g00071 | 1235 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 64 | 1173 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cla09g00071 | 1235 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 917 | 1165 | IPR032630 | - | |
Cla09g00071 | 1235 | PRINTS | P-type cation-transporting ATPase superfamily signature | 431 | 445 | - | - | |
Cla09g00071 | 1235 | PRINTS | P-type cation-transporting ATPase superfamily signature | 889 | 908 | - | - | |
Cla09g00071 | 1235 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 532 | 696 | IPR023299 | GO:0000166 | |
Cla09g00071 | 1235 | MobiDBLite | consensus disorder prediction | 478 | 501 | - | - | |
Cla09g00071 | 1235 | SFLD | p-type atpase | 415 | 940 | IPR044492 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g02349 | Cla-Chr5:35088234 | Cla09g00071 | Cla-Chr9:677972 | 0 | dispersed | |
Cla06g00811 | Cla-Chr6:11384214 | Cla09g00071 | Cla-Chr9:677972 | 0 | dispersed | |
Cla08g00858 | Cla-Chr8:20979650 | Cla09g00071 | Cla-Chr9:677972 | 0 | dispersed | |
Cla09g00071 | Cla-Chr9:677972 | Cla01g00803 | Cla-Chr1:9377849 | 5.07E-14 | dispersed | |
Cla09g00071 | Cla-Chr9:677972 | Cla04g01120 | Cla-Chr4:26405711 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00071 | K01530 | - | csv:101221220 | 2360.1 |