Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cla09g00073	ATGCAACGCTTTCGAGCTATGGCAACTCCCATGGCTGAAGAAGCAACCATCGATTCCAATTCCACTGCCCACACGGTGATCGCCATTAGTAGGGACAAGAACAGTCAATATGCGGTTAAATGGGCTGTGGAACACCTGTTCAATAGGAAGAACACTGGCGATTGCATCCTTATCCATGTTCGCAACCAGAGTTTGCATCCCCAGGAGGCGGATGCGGTTCCTAAGGAGTATCGTCCACCATCTGAAGCAGAGTTGCATCAGTTCTTCCTTCCCTATCGAGGATTCTGCGCACGAAAAGGAATAGTTACAAAGGAGACAATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTATGTCAGTAAACATTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTTTGAGGAAGTTCAAGAATCCTGATGTCCCAACGTGCTTACTCAAATCAACTCCAGAATCATGCTCTGTATATGTCATAGCTAGAGGAAAAGTTCATACTAAGAGATTGAGAAAGCGACATAAGTCACAGACTGATGTGAGAGAAACTCAAACCAGAACTCCAGAAATCGACAGGTCTCTATCAAAAATACAAAAATCAGCATATTCTAATATCTCAGAACTATCTGAAGATAGAAACAGGGATAGTTCTGGCACCAGTAATGATTCAATGTCAGGCATTAGTGACTTTTCGGGGCCTCTCAGTTTCAAATCAATTGAAACATCCTTTGAGAGCCCAGATTTTTCCTTAACCTCCTCAGAGACTAGTACGAGGAGCTTTGTCTCCTCTAACACCCCACCTTCCATTGAATCTGAGATGAGAAAGTTGAGGTTTGAACTCAAACAGACGATGGAAATGTATGACTCAGCTTCCAAGGAAGCTGTAGTAGCAAAACAAAAGGCAAATGAACTCCAACAGTTGAAGATGGATATGGAAGAAGACAGAAAAATTGAGCGTGGTAAATCTGCAGAAGAGGTTCTTAGAGCATTGGCAGAGTTTGAGAAGCAGAAGAACAAGGCTGCGACAGAAGCAGCTCTAATGGCGCAGAAGTTAGCCGAATTAGAGAACCAGAAAAAACGAATTGTTACTGAAGAAAAAGCTAGGATTGAGGCAGAGGAGAGGAAGAAAACAATGGAGTTATTTGAACGCAGTAATATCTGTTATAGACGATACAGCATTGACGAGATTGAAGCTGCAACAGATCATTTTAATGAGTCAAACAAGATTGGTGAAGGTGGCTATGGACCTGTTTACCAAGCCTTACTTGATCATACTCCTGTTGCCATTAAGATATTGCGACCAGATAGATCTCATGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTCTAAGCCGCATGAGGCATCCGCACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATACGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGTTTGGAAGACCGCCTCTTCCAAAAAGATAACACTCCTCCAATGCCTTGGAGAACACGTTTCAGGATAGCTTCTGACATTGCCACTGCCCTACTCTTCCTTCATCAAATGAAGCCAGAACCTGTGGTGCATCGTGATCTCAAGCCAGCCAACATTCTCTTAGATCACAACTACGTGAGCAAAATAGGTGATGTGGGTTTGGCCAGGCTAGTTCCACCATCGGTTGCTGATAGTGTCACTCAATATCACATGACTGCTGCAGCTGGAACCTTCTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGGGGGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTACTTCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTTGAGGAGGCCATTGAACATGGCAAATTCCCGCAGATACTTGATCCTGCCATTACAGATTGGCCTATTGAAGATACTCTTGGACTCGCTCAATTAGCCCTGAAGTGCTGTGAGCTAAGGAAAAGAGATAGGCCCGACCTCCGTACAGTTCTATTGCCAGAACTGGTCAGGTTAAAAAATCTGGGGTCAGGCGAAATGCCACCAAAGGGTAAGCTCCCAAATGTCGGCAAAGCGCGTGATCAACGGGCTTCCAACTCAGTTCCAATTTTGAATGGATCAGAGAGTGAGGAAGGAATGAGAAACAATCCTAACCTGCCAATGGAAATTCAACGTAGATCTATATGGCAGCGATTGAAAGTGAGTACGAGATTTTGGAGCCAAAAGGGTATTGGTTTGAATACCGTTTCTCCGCAGATAAAGAAAAAATGGAGCTGGAACAACAGTGATGCAAAAGTCTTAAATATACCATTACCAATGAGTGGAAAACAAGTTGATGTACTCTCAAAGAAGCAGCAAAGCTCTGAACGCTGTTGGTCTTTGGTAGGTTGTGCTTCTGCTGCTACTATGGGCTTTAGCTTACGCGTTTGGGTTCGGCTGAGTTGCGCCGCCTTATACGTTTGGTTTGACCCGCTCTCTCTCTCTCTCTCAGATTTGGAGAGAATTGAGCGTAACCCTAAGCTTAGAACTCGAATCTCCACTATGGCTGACCATTCTTCCAATCGCGATACTGATTCAGGGTTTGATCATGGCTCACCTCAACCACGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCTTATCGGAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCTGGTGCTGTCGGCGGAGCATCTACAGGACTCGTATCCGGCGTCAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCAGGGCGTCTTTGGGGGAATCGGCTCGGCGTGATTGGGTTGCTTTATGCTGGTTTGGAGAGCGGGATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTATTGCAGCAGGACTTGGCACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTGAGATCGGCGGCGGTGGCCGGTGCTATTGGCGGTGTCGTGGTTGGCGTGGCGGTGACGGGTAAGCAGATGTTGAAGCGTCCAAGGGTTACACTACAAAAACCTAACAGCCTTCACAAAAACTTCCCTCTTTCGCTCGCTGCGCTTTGCCCAACACTCGCCTCCAACTCCACGGATCAGATCCGAAGAGTTTGGCAAACCCTAGCTTCCTTTCTTCAATCTCCATCTGTTTCATCTTCCTCTTTCTTCTCTAACATTCCGCAGTTTGATTCTCGCCAATATGATGCTAAAATGAATGAGATTCTTTCGGCAGAAGGCCAGGAATTCTTTACCTCATATGATGAAGTATATGAAAGTTTTGATTCGATGGGGCTGCAAGAAAATCTCCTTAGAGGCATTTATGCCTATGGTTTTGAGAAACCATCTGCAATTCAGCAAAGAGGTATTGTTCCCTTCTGCAAAGGCCTTGATGTGATTCAGCAGGCTCAGTCTGGAACTGGGAAGACTGCAACCTTCTGCTCTGGGATACTTCAGCAACTTGATTATGGTCTAATCCAGTGTCAGGCATTAGTTCTGGCTCCGACTAGGGAGCTGGCTCAACAAATCGAGAAGGTTATGAGAGCTCTTGGAGATTATCTTGGTGTCAAGGTTCATGCTTGTGTAGGAGGGACAAGTGTCCGTGAAGATCAACGCATTCTTCAAGCTGGTGTTCATGTAGTAGTTGGAACACCTGGTCGTGTGTTTGACATGTTAAGGAGGCAGTCTCTTCGCCCAGATTGTATTAAGATGTTTGTATTGGATGAAGCTGATGAAATGCTTTCTCGAGGTTTCAAAGATCAGATCTATGACATTTTCCAGCTGTTGCCGTCAAAAATTCAAGTTGGGGTATTCTCCGCCACAATGCCACCAGAAGCTTTGGAGATCACGAGGAAATTCATGAACAAGCCTGTCAGAATCTTGGTAAAACGTGATGAGCTTACTTTGGAGGGTATCAAACAATTTTACGTAAATGTCGATAAGGAAGATTGGAAGCTCGAAACTCTATGTGATCTCTACGAGACTCTGGCTATCACTCAAAGTGTTATTTTTGTTAACACACGTCGCAAGGTCGATTGGCTTACAGACAAGATGAGAAGCCGAGACCATACCGTATCAGCCACCCATGGTGACATGGACCAGAACACTCGAGATATAATCATGCGTGAATTTCGGTCTGGTTCGTCTCGTGTCCTTATCACAACTGACTTGTTAGCTCGTGGTATTGATGTTCAGCAAGTCTCCCTTGTCATAAATTATGATTTACCAACCCAACCAGAAAATTACCTTCATCGAATTGGCCGAAGTGGGCGTTTTGGAAGAAAGGGTGTTGCCATCAATTTTGTTACAAATGATGATGACAGAATGCTTTTTGATATTCAGAAGTTCTATAATGTGGTCATCGAGGAGCTGCCAGCCAATGTTGCAGATCTCCTATGA	4500	45.16	MQRFRAMATPMAEEATIDSNSTAHTVIAISRDKNSQYAVKWAVEHLFNRKNTGDCILIHVRNQSLHPQEADAVPKEYRPPSEAELHQFFLPYRGFCARKGIVTKETIIHDIDVPSALIDYVSKHSISNIVVGASSRNAILRKFKNPDVPTCLLKSTPESCSVYVIARGKVHTKRLRKRHKSQTDVRETQTRTPEIDRSLSKIQKSAYSNISELSEDRNRDSSGTSNDSMSGISDFSGPLSFKSIETSFESPDFSLTSSETSTRSFVSSNTPPSIESEMRKLRFELKQTMEMYDSASKEAVVAKQKANELQQLKMDMEEDRKIERGKSAEEVLRALAEFEKQKNKAATEAALMAQKLAELENQKKRIVTEEKARIEAEERKKTMELFERSNICYRRYSIDEIEAATDHFNESNKIGEGGYGPVYQALLDHTPVAIKILRPDRSHGQRQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFQKDNTPPMPWRTRFRIASDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGKFPQILDPAITDWPIEDTLGLAQLALKCCELRKRDRPDLRTVLLPELVRLKNLGSGEMPPKGKLPNVGKARDQRASNSVPILNGSESEEGMRNNPNLPMEIQRRSIWQRLKVSTRFWSQKGIGLNTVSPQIKKKWSWNNSDAKVLNIPLPMSGKQVDVLSKKQQSSERCWSLVGCASAATMGFSLRVWVRLSCAALYVWFDPLSLSLSDLERIERNPKLRTRISTMADHSSNRDTDSGFDHGSPQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCIAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQMLKRPRVTLQKPNSLHKNFPLSLAALCPTLASNSTDQIRRVWQTLASFLQSPSVSSSSFFSNIPQFDSRQYDAKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTNDDDRMLFDIQKFYNVVIEELPANVADLL	1499

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
9	688045	701557	-	ClCG09G000810.2	Cla09g00073	279493

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cla09g00073	1499	Pfam	Protein kinase domain	408	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cla09g00073	1499	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1195	1480	IPR027417	-
Cla09g00073	1499	SMART	helicmild6	1379	1460	IPR001650	-
Cla09g00073	1499	Pfam	DEAD/DEAH box helicase	1151	1312	IPR011545	GO:0003676\|GO:0005524
Cla09g00073	1499	ProSiteProfiles	Protein kinase domain profile.	408	672	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cla09g00073	1499	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	526	538	IPR008271	GO:0004672\|GO:0006468
Cla09g00073	1499	SMART	ultradead3	1145	1342	IPR014001	-
Cla09g00073	1499	Pfam	Universal stress protein family	26	141	IPR006016	-
Cla09g00073	1499	CDD	DEADc_EIF4A	1131	1328	-	-
Cla09g00073	1499	Gene3D	Transferase(Phosphotransferase) domain 1	481	677	-	-
Cla09g00073	1499	Gene3D	-	1116	1334	IPR027417	-
Cla09g00073	1499	MobiDBLite	consensus disorder prediction	851	870	-	-
Cla09g00073	1499	Gene3D	Phosphorylase Kinase; domain 1	376	480	-	-
Cla09g00073	1499	Pfam	Tim17/Tim22/Tim23/Pmp24 family	913	1022	-	-
Cla09g00073	1499	MobiDBLite	consensus disorder prediction	252	273	-	-
Cla09g00073	1499	SMART	serkin_6	408	672	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Cla09g00073	1499	ProSiteProfiles	DEAD-box RNA helicase Q motif profile.	1126	1154	IPR014014	GO:0003724
Cla09g00073	1499	PANTHER	OS02G0152300 PROTEIN	24	684	-	-
Cla09g00073	1499	MobiDBLite	consensus disorder prediction	181	198	-	-
Cla09g00073	1499	MobiDBLite	consensus disorder prediction	174	232	-	-
Cla09g00073	1499	Gene3D	-	1335	1499	IPR027417	-
Cla09g00073	1499	SUPERFAMILY	Protein kinase-like (PK-like)	385	667	IPR011009	-
Cla09g00073	1499	CDD	STK_N	25	168	-	-
Cla09g00073	1499	ProSiteProfiles	Superfamilies 1 and 2 helicase C-terminal domain profile.	1338	1499	IPR001650	-
Cla09g00073	1499	Coils	Coil	328	379	-	-
Cla09g00073	1499	ProSitePatterns	DEAD-box subfamily ATP-dependent helicases signature.	1273	1281	IPR000629	-
Cla09g00073	1499	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	26	165	-	-
Cla09g00073	1499	ProSiteProfiles	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	1157	1327	IPR014001	-
Cla09g00073	1499	Gene3D	HUPs	11	166	IPR014729	-
Cla09g00073	1499	Coils	Coil	278	322	-	-
Cla09g00073	1499	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	24	684	-	-
Cla09g00073	1499	CDD	SF2_C_DEAD	1339	1469	-	-
Cla09g00073	1499	Pfam	Helicase conserved C-terminal domain	1352	1460	IPR001650	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cla09g00073	K03257	EIF4A; translation initiation factor 4A	-	bhj:120085014	1406.73

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cla08g01330	Cla-Chr8:26169949	Cla09g00073	Cla-Chr9:688045	1.43E-62	dispersed
Cla01g00806	Cla-Chr1:9464884	Cla09g00073	Cla-Chr9:688045	1.17E-45	transposed
Cla01g01643	Cla-Chr1:31265172	Cla09g00073	Cla-Chr9:688045	3.43E-12	transposed
Cla02g00462	Cla-Chr2:4479828	Cla09g00073	Cla-Chr9:688045	0	transposed
Cla05g02642	Cla-Chr5:37623867	Cla09g00073	Cla-Chr9:688045	2.77E-28	transposed
Cla06g00914	Cla-Chr6:15144866	Cla09g00073	Cla-Chr9:688045	5.99E-54	transposed
Cla08g01004	Cla-Chr8:22789988	Cla09g00073	Cla-Chr9:688045	0	transposed
Cla08g01256	Cla-Chr8:25473806	Cla09g00073	Cla-Chr9:688045	0	transposed
Cla10g01132	Cla-Chr10:25806437	Cla09g00073	Cla-Chr9:688045	1.78E-171	transposed
Cla10g01864	Cla-Chr10:34554306	Cla09g00073	Cla-Chr9:688045	4.51E-62	transposed
Cla11g01104	Cla-Chr11:22448886	Cla09g00073	Cla-Chr9:688045	2.35E-19	transposed
Cla11g00152	Cla-Chr11:1806239	Cla09g00073	Cla-Chr9:688045	6.65E-134	wgd
Cla07g01320	Cla-Chr7:30378278	Cla09g00073	Cla-Chr9:688045	0	wgd

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cla03g00157	.	187	629	Chloroplast and Mitochondria Gene Families	AT2G28800	59.0	4.8e-131	464.9
Cla08g01713	.	72	352	Chloroplast and Mitochondria Gene Families	AT2G28800	54.5	5.2e-77	285.4
Cla08g00704	.	3	249	Chloroplast and Mitochondria Gene Families	AT1G15820	81.9	5.2e-117	417.5
Cla02g00280	.	1	265	Chloroplast and Mitochondria Gene Families	AT3G27690	88.7	1.1e-142	503.1
Cla02g01804	.	2	267	Chloroplast and Mitochondria Gene Families	AT3G27690	78.4	6.9e-121	430.6
Cla01g02379	.	2	265	Chloroplast and Mitochondria Gene Families	AT3G27690	77.4	3.4e-120	428.3
Cla01g02380	.	46	309	Chloroplast and Mitochondria Gene Families	AT3G27690	76.7	2.9e-119	425.2
Cla10g01121	.	1	265	Chloroplast and Mitochondria Gene Families	AT3G27690	78.0	6.5e-119	424.1
Cla10g00607	.	5	266	Chloroplast and Mitochondria Gene Families	AT3G27690	66.9	1.2e-96	350.1
Cla11g01861	.	113	329	Chloroplast and Mitochondria Gene Families	AT3G27690	51.2	1.1e-52	204.1
Cla08g00194	.	118	321	Chloroplast and Mitochondria Gene Families	AT3G27690	53.8	6.8e-52	201.4
Cla11g01337	.	3	268	Chloroplast and Mitochondria Gene Families	AT3G61470	80.9	1.3e-128	456.1
Cla03g01434	.	56	261	Chloroplast and Mitochondria Gene Families	AT3G61470	65.5	2.8e-86	315.5
Cla06g01586	CCT,ECH	368	595	Chloroplast and Mitochondria Gene Families	AT3G61470	50.8	8.7e-64	240.7
Cla09g02009	.	1	198	Chloroplast and Mitochondria Gene Families	AT3G54890	81.6	5.9e-90	327.4
Cla04g00716	.	105	382	Chloroplast and Mitochondria Gene Families	AT3G08940	82.1	7.6e-133	470.3
Cla10g02086	.	76	333	Chloroplast and Mitochondria Gene Families	AT3G08940	81.3	1.1e-118	423.3
Cla11g01861	.	48	336	Chloroplast and Mitochondria Gene Families	AT1G76570	79.2	4.6e-142	501.1
Cla03g01160	.	1	273	Chloroplast and Mitochondria Gene Families	AT1G61520	86.8	8.2e-137	483.4
Cla02g00280	.	1	265	Chloroplast and Mitochondria Gene Families	AT2G05070	89.4	3.0e-144	508.1
Cla01g02379	.	5	265	Chloroplast and Mitochondria Gene Families	AT2G05070	79.3	1.0e-120	429.9
Cla01g02380	.	49	309	Chloroplast and Mitochondria Gene Families	AT2G05070	78.6	5.2e-120	427.6
Cla02g01804	.	7	267	Chloroplast and Mitochondria Gene Families	AT2G05070	78.9	6.8e-120	427.2
Cla10g01121	.	27	265	Chloroplast and Mitochondria Gene Families	AT2G05070	84.5	1.7e-118	422.5
Cla10g00607	.	7	266	Chloroplast and Mitochondria Gene Families	AT2G05070	68.0	3.6e-97	351.7
Cla03g00652	.	27	256	Chloroplast and Mitochondria Gene Families	AT2G05070	50.4	2.1e-52	203.0
Cla08g00194	.	118	321	Chloroplast and Mitochondria Gene Families	AT2G05070	54.3	4.6e-52	201.8
Cla11g01861	.	113	329	Chloroplast and Mitochondria Gene Families	AT2G05070	50.2	3.0e-51	199.1
Cla02g00280	.	1	237	Chloroplast and Mitochondria Gene Families	AT2G05100	89.5	1.7e-125	446.0
Cla01g02379	.	5	237	Chloroplast and Mitochondria Gene Families	AT2G05100	76.9	5.8e-102	367.9
Cla01g02380	.	49	281	Chloroplast and Mitochondria Gene Families	AT2G05100	76.4	1.7e-101	366.3
Cla02g01804	.	7	239	Chloroplast and Mitochondria Gene Families	AT2G05100	76.9	5.0e-101	364.8
Cla10g01121	.	27	237	Chloroplast and Mitochondria Gene Families	AT2G05100	83.4	1.9e-100	362.8
Cla10g00607	.	7	238	Chloroplast and Mitochondria Gene Families	AT2G05100	67.6	5.1e-82	301.6
Cla08g00194	.	118	305	Chloroplast and Mitochondria Gene Families	AT2G05100	53.1	1.6e-43	173.7
Cla04g00716	.	105	264	Chloroplast and Mitochondria Gene Families	AT2G40100	72.0	9.7e-65	243.4
Cla10g02086	.	76	229	Chloroplast and Mitochondria Gene Families	AT2G40100	66.7	2.4e-55	212.2
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT1G29930	88.4	1.8e-136	482.3
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT1G29930	88.8	4.0e-136	481.1
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT1G29930	88.4	6.8e-136	480.3
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT1G29930	84.9	1.7e-126	449.1
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT1G29930	78.3	3.5e-116	414.8
Cla10g00607	.	1	266	Chloroplast and Mitochondria Gene Families	AT1G29930	65.2	1.0e-94	343.6
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT1G29930	57.1	1.2e-68	256.9
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT1G29920	88.1	6.8e-136	480.3
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT1G29920	88.4	1.5e-135	479.2
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT1G29920	88.0	2.6e-135	478.4
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT1G29920	84.9	2.2e-126	448.7
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT1G29920	77.9	2.1e-116	415.6
Cla10g00607	.	1	266	Chloroplast and Mitochondria Gene Families	AT1G29920	65.2	1.7e-94	342.8
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT1G29920	56.8	4.7e-68	255.0
Cla08g00194	.	101	321	Chloroplast and Mitochondria Gene Families	AT1G29920	50.7	7.2e-53	204.5
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT1G29910	88.1	6.8e-136	480.3
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT1G29910	88.4	1.5e-135	479.2
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT1G29910	88.0	2.6e-135	478.4
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT1G29910	84.9	2.2e-126	448.7
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT1G29910	77.9	2.1e-116	415.6
Cla10g00607	.	1	266	Chloroplast and Mitochondria Gene Families	AT1G29910	65.2	1.7e-94	342.8
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT1G29910	56.8	4.7e-68	255.0
Cla08g00194	.	101	321	Chloroplast and Mitochondria Gene Families	AT1G29910	50.7	7.2e-53	204.5
Cla08g00194	.	56	336	Chloroplast and Mitochondria Gene Families	AT4G10340	84.7	5.3e-139	490.7
Cla01g02380	.	81	297	Chloroplast and Mitochondria Gene Families	AT4G10340	52.9	3.9e-57	218.8
Cla01g02379	.	37	253	Chloroplast and Mitochondria Gene Families	AT4G10340	52.5	6.6e-57	218.0
Cla10g01121	.	49	253	Chloroplast and Mitochondria Gene Families	AT4G10340	54.1	8.6e-57	217.6
Cla02g01804	.	51	255	Chloroplast and Mitochondria Gene Families	AT4G10340	54.1	1.1e-56	217.2
Cla02g00280	.	49	253	Chloroplast and Mitochondria Gene Families	AT4G10340	52.6	3.1e-54	209.1
Cla10g00607	.	48	254	Chloroplast and Mitochondria Gene Families	AT4G10340	54.0	3.8e-52	202.2
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT2G34420	88.4	1.2e-135	479.6
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT2G34420	88.0	1.7e-134	475.7
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT2G34420	87.6	2.8e-134	474.9
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT2G34420	85.7	3.4e-127	451.4
Cla02g00280	.	3	265	Chloroplast and Mitochondria Gene Families	AT2G34420	77.2	7.0e-117	417.2
Cla10g00607	.	24	266	Chloroplast and Mitochondria Gene Families	AT2G34420	70.1	8.4e-94	340.5
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT2G34420	56.8	5.1e-67	251.5
Cla01g02380	.	45	309	Chloroplast and Mitochondria Gene Families	AT2G34430	88.3	8.0e-137	483.4
Cla01g02379	.	1	265	Chloroplast and Mitochondria Gene Families	AT2G34430	88.3	3.0e-136	481.5
Cla02g01804	.	1	267	Chloroplast and Mitochondria Gene Families	AT2G34430	88.1	2.0e-135	478.8
Cla10g01121	.	4	265	Chloroplast and Mitochondria Gene Families	AT2G34430	85.6	4.7e-129	457.6
Cla02g00280	.	31	265	Chloroplast and Mitochondria Gene Families	AT2G34430	83.2	1.9e-114	409.1
Cla10g00607	.	36	266	Chloroplast and Mitochondria Gene Families	AT2G34430	70.5	8.4e-94	340.5
Cla03g00652	.	1	256	Chloroplast and Mitochondria Gene Families	AT2G34430	55.9	2.3e-67	252.7
Cla04g00716	.	105	382	Chloroplast and Mitochondria Gene Families	AT5G01530	83.5	6.7e-137	483.8
Cla10g02086	.	73	333	Chloroplast and Mitochondria Gene Families	AT5G01530	84.1	2.4e-126	448.7
Cla10g00746	.	269	528	Chloroplast and Mitochondria Gene Families	AT5G40810	93.5	2.5e-143	505.0
Cla10g00746	.	233	528	Chloroplast and Mitochondria Gene Families	AT3G27240	83.5	6.8e-148	520.4
Cla02g01883	.	5	327	Chloroplast and Mitochondria Gene Families	AT2G30160	75.3	7.1e-143	503.8
Cla04g00684	.	100	402	Chloroplast and Mitochondria Gene Families	AT2G30160	64.2	9.4e-111	397.1
Cla02g01883	.	5	323	Chloroplast and Mitochondria Gene Families	AT1G07030	76.4	3.2e-143	505.0
Cla04g00684	.	96	402	Chloroplast and Mitochondria Gene Families	AT1G07030	67.5	1.7e-117	419.5
Cla09g00508	.	1	380	Chloroplast and Mitochondria Gene Families	AT2G47490	55.5	1.6e-107	386.3
Cla01g00571	.	9	374	Chloroplast and Mitochondria Gene Families	AT2G47490	52.6	4.6e-99	358.2
Cla01g00571	.	10	426	Chloroplast and Mitochondria Gene Families	AT1G25380	54.1	9.3e-112	400.6
Cla09g00508	.	73	349	Chloroplast and Mitochondria Gene Families	AT1G25380	57.0	8.8e-86	314.3
Cla03g00519	.	597	1172	Chloroplast and Mitochondria Gene Families	AT4G21490	75.6	7.3e-260	893.3
Cla02g01697	.	434	1056	Chloroplast and Mitochondria Gene Families	AT4G21490	66.2	6.6e-237	817.0
Cla02g00132	.	23	596	Chloroplast and Mitochondria Gene Families	AT4G21490	64.7	1.2e-225	779.6
Cla09g00073	.	847	1035	Chloroplast and Mitochondria Gene Families	AT1G17530	62.5	2.6e-62	235.3
Cla06g00914	.	4	179	Chloroplast and Mitochondria Gene Families	AT1G17530	57.3	1.3e-50	196.4
Cla06g00914	.	12	183	Chloroplast and Mitochondria Gene Families	AT3G04800	57.8	1.8e-50	196.1
Cla09g00073	.	871	1035	Chloroplast and Mitochondria Gene Families	AT3G04800	53.9	1.5e-41	166.4
Cla09g00073	.	864	1035	Chloroplast and Mitochondria Gene Families	AT1G72750	68.4	4.6e-62	234.6
Cla06g00914	.	5	183	Chloroplast and Mitochondria Gene Families	AT1G72750	57.1	2.5e-52	202.2
Cla05g02337	CCT	663	837	Chloroplast and Mitochondria Gene Families	AT1G26100	69.7	1.6e-67	253.1
Cla11g00506	.	1	278	Chloroplast and Mitochondria Gene Families	AT5G38630	57.7	4.4e-83	304.7
Cla09g01236	.	144	351	Chloroplast and Mitochondria Gene Families	AT4G25570	69.5	4.9e-84	308.1
Cla01g00658	.	2	225	Chloroplast and Mitochondria Gene Families	AT1G14730	50.4	2.7e-61	232.3
Cla01g00764	.	9	356	Chloroplast and Mitochondria Gene Families	AT5G14040	82.3	2.3e-169	592.0
Cla05g01339	.	10	395	Chloroplast and Mitochondria Gene Families	AT5G14040	69.8	5.0e-153	537.7
Cla06g01777	.	39	329	Chloroplast and Mitochondria Gene Families	AT5G14040	86.6	4.4e-149	524.6
Cla02g00337	.	11	297	Chloroplast and Mitochondria Gene Families	AT5G14040	52.1	1.2e-82	303.9
Cla01g00764	.	8	356	Chloroplast and Mitochondria Gene Families	AT3G48850	72.0	7.6e-146	513.8
Cla05g01339	.	11	401	Chloroplast and Mitochondria Gene Families	AT3G48850	65.1	1.8e-139	492.7
Cla06g01777	.	10	329	Chloroplast and Mitochondria Gene Families	AT3G48850	67.6	2.3e-134	475.7
Cla02g00337	.	11	297	Chloroplast and Mitochondria Gene Families	AT3G48850	50.5	3.7e-84	308.9
Cla02g00337	.	14	308	Chloroplast and Mitochondria Gene Families	AT2G17270	76.9	1.1e-132	469.9
Cla01g00764	.	62	352	Chloroplast and Mitochondria Gene Families	AT2G17270	52.6	4.8e-85	311.6
Cla06g01777	.	44	328	Chloroplast and Mitochondria Gene Families	AT2G17270	50.2	5.5e-81	298.1
Cla11g00459	.	16	343	Chloroplast and Mitochondria Gene Families	AT5G15640	68.6	4.7e-120	427.9
Cla05g00729	.	47	341	Chloroplast and Mitochondria Gene Families	AT5G15640	50.2	5.9e-78	288.1
Cla05g01857	.	12	345	Chloroplast and Mitochondria Gene Families	AT5G26200	66.8	1.2e-124	443.4
Cla09g00079	.	1	344	Chloroplast and Mitochondria Gene Families	AT5G26200	57.8	1.8e-104	376.3
Cla09g00079	.	1	348	Chloroplast and Mitochondria Gene Families	AT1G72820	75.8	2.3e-147	518.8
Cla05g01857	.	1	346	Chloroplast and Mitochondria Gene Families	AT1G72820	68.8	5.1e-131	464.5
Cla01g00235	CCT,ECH	82	285	Chloroplast and Mitochondria Gene Families	AT5G52570	52.5	2.3e-50	196.1
Cla05g00912	CCT,ECH	1	219	Chloroplast and Mitochondria Gene Families	AT4G25700	63.2	1.2e-69	260.0
Cla01g00235	CCT,ECH	31	204	Chloroplast and Mitochondria Gene Families	AT4G25700	62.2	1.5e-56	216.5
Cla02g00146	.	177	355	Chloroplast and Mitochondria Gene Families	AT4G03320	52.2	8.8e-57	217.6
Cla10g00609	.	72	359	Chloroplast and Mitochondria Gene Families	AT5G54290	79.0	9.1e-120	427.2
Cla06g01286	.	43	546	Chloroplast and Mitochondria Gene Families	AT2G18710	83.9	4.7e-240	827.4

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0007327	0	3	0	1	1	1	2	1	1	1	1	1	2	1	0	1	1	1	2	1	1	1	1	1	1	1	1	3	1	1	34

Regulatory proteins

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	80779	PF00069	Pkinase	1.50E-41	CL0016	Cla	PK

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cla09g00073	Cla_Chr09	FPKM	12.551802	13.181603	25.162922	25.923824	13.940208	14.776216	12.873115	7.611341	7.767854	8.674973