Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla09g00096 | ATGGCGAATTTCCATCGCTCTTCTTCACTTTTCTTCTTCTTCATCTTCTGTTTCGTCCCTGTAATTTTCTCTCGATCGCCGGATAATCAAGAGACATTCATCGTTCATGTCTCTAAATCGGAGAAGCCTTCTTTATTTTCCTCCCATCGTCACTGGCACTCTTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAACTACGAACATGCCGTTAATGGATTCTCCGCACGCATCACGGCTGCTCAGGCGGCGGAGCTGCGTCATGTTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACGACTCGGACGCCTCATTTCTTGGGACTGGCGGATAACCTAGGGCTCTGGCCTGACACGAATTATGCCGAAGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGGGAGGCCGAGTTTCTCCGATGAAGGTTTGTCTCCGGTTCCGGCAAGCTGGAAAGGCACCTGCGAGGCTGGGGAGGGATTTTCGGCTTCGACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTAACGGATACGAGTCTAATTTAGGAAGATCGCTTCGTTCTTCGGATTTCAAATCTGCTAGGGATTCGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAAAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGAATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTTCGATTCTGACATACTCGCCGCTATGGATCAGGCGATTGCCGATGGCGTTCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCGCCCGCGTACTATCGAGATTCCATTGCAATTGGAGCGTTTGGGGCAATGCAGCACGGTGTCGTCGTCTCTTGCTCCGCCGGTAATTCCGGTCCCGGTCCTTACACGGCTGTGAACATCGCTCCTTGGATCCTCACCGTCGGTGCCTCCACAATCGACAGGGAGTTTCTTGCCGATGTCATTCTCGGAGACGGCAGGGTTTTCAGCGGCGTGTCGCTGTACTCCGGCGAACCCCTTGGCGATTCCAAGCTTCCGTTGGTTTACGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATCCGGCGAAAGTCGCAGGAAAAATTGTCGTGTGCGACCGAGGAGGGAACGCCAGAGTCGCCAAAGGAGGCGCAGTGAAGTCCGCCGGTGGTCTTGGTATGGTACTCGCCAATACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCAGGAACAATGGTCGGTGAAATCGCCGGCAACAAGCTTAGAAACTACATCCATTCGGATCCGAATCCAACTGCTACAATCGTGTTTCGCGGAACTGTCATTGGCAATTCGCCTTCAGCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGGACGGCGGAGATTCTAAAACCAGATGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCAGTCTAAGCATCGATTCTCGAAGAGTCGAGTTCAATATCATCTCCGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTCGCCGCCTTGCTCCGTAAGGCTTTTCCGACGTGGTCACCGGCTGCTATCAAATCTGCTCTGATAACCACTTCTTACTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCTCCACCAGCAAAGAATCAAATCCATTCGTCCATGGCGCCGGCCACATCGATCCCAACAAAGCTCTGAATCCGGGCCTGATTTATGATCTCACTCCTCAAGACTACGTTTCATTTCTCTGCTCAATCGGTTACGACTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCCCAACTATGTGAGCACAAACTGAGCAATCCAGGCAACCTGAATTACCCATCATTCTCTGTCGTGTTCGACGGCGAGGAGGTGGTGAAATATACAAGAACAGTGACAAATGTAGGAGATGAAACTGATGTTTATGAAGTGAAAGTAGAATCCCCACAAGGAGTTGAAATCAGTGTTCTTCCCAACAAGCTGGAGTTCAATGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGGAATCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGCCACAATGTTAGGAGTCCAATTGCTGTCTCGTTCAACACTGGATCCATAGCTTCGATGGCCACAGCCCCTCAAACCTTTCTCACACTTCCTAATGGCTCAGTCTTACGAATCTCAGCCGCAAGACGAGGCCCAATCCCTCCTCCGCTCCGGCAACCGTCGGCCGTCACGTCGGTGGAGCCTTCTGCGGCGGAAGAAGCTGCCGACAGCCCGCCTCGGGGGCAGAAGGGCGCCGAGAACGGTGGCGATTTGGAGGTCAATTAA | 2505 | 51.42 | MANFHRSSSLFFFFIFCFVPVIFSRSPDNQETFIVHVSKSEKPSLFSSHRHWHSSILESLSPSPHPTKLLYNYEHAVNGFSARITAAQAAELRHVPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWPDTNYAEDVIIGVLDTGIWPGRPSFSDEGLSPVPASWKGTCEAGEGFSASTCNRKIIGARAYFNGYESNLGRSLRSSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCFDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGEPLGDSKLPLVYGGDCGSRYCYSGSLDPAKVAGKIVVCDRGGNARVAKGGAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRNYIHSDPNPTATIVFRGTVIGNSPSAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDSRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLSTSKESNPFVHGAGHIDPNKALNPGLIYDLTPQDYVSFLCSIGYDSRQIAVFVKDSSYSQLCEHKLSNPGNLNYPSFSVVFDGEEVVKYTRTVTNVGDETDVYEVKVESPQGVEISVLPNKLEFNAKKTTQSYEITFTKISGFKESASFGSIQWSDGSHNVRSPIAVSFNTGSIASMATAPQTFLTLPNGSVLRISAARRGPIPPPLRQPSAVTSVEPSAAEEAADSPPRGQKGAENGGDLEVN | 834 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 943443 | 948697 | - | ClCG09G001040.2 | Cla09g00096 | 279516 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla09g00096 | 834 | Gene3D | Peptidase S8/S53 domain | 135 | 625 | IPR036852 | GO:0004252|GO:0006508 | |
| Cla09g00096 | 834 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.6 | 20 | 761 | - | - | |
| Cla09g00096 | 834 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 110 | IPR037045 | - | |
| Cla09g00096 | 834 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 108 | 612 | - | - | |
| Cla09g00096 | 834 | MobiDBLite | consensus disorder prediction | 790 | 834 | - | - | |
| Cla09g00096 | 834 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 761 | IPR045051 | - | |
| Cla09g00096 | 834 | CDD | PA_subtilisin_like | 349 | 472 | - | - | |
| Cla09g00096 | 834 | Gene3D | - | 343 | 480 | - | - | |
| Cla09g00096 | 834 | SUPERFAMILY | PA domain | 363 | 465 | IPR046450 | - | |
| Cla09g00096 | 834 | Pfam | Fibronectin type-III domain | 661 | 757 | IPR041469 | - | |
| Cla09g00096 | 834 | Pfam | PA domain | 374 | 458 | IPR003137 | - | |
| Cla09g00096 | 834 | Gene3D | - | 629 | 760 | - | - | |
| Cla09g00096 | 834 | Pfam | Subtilase family | 134 | 581 | IPR000209 | GO:0006508|GO:0008236 | |
| Cla09g00096 | 834 | SUPERFAMILY | Subtilisin-like | 109 | 616 | IPR036852 | GO:0004252|GO:0006508 | |
| Cla09g00096 | 834 | PRINTS | Subtilisin serine protease family (S8) signature | 541 | 557 | IPR015500 | - | |
| Cla09g00096 | 834 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
| Cla09g00096 | 834 | PRINTS | Subtilisin serine protease family (S8) signature | 211 | 224 | IPR015500 | - | |
| Cla09g00096 | 834 | Pfam | Peptidase inhibitor I9 | 32 | 110 | IPR010259 | - | |
| Cla09g00096 | 834 | CDD | Peptidases_S8_3 | 108 | 578 | IPR034197 | - | |
| Cla09g00096 | 834 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 542 | 552 | IPR023828 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla07g00626 | Cla-Chr7:11788288 | Cla09g00096 | Cla-Chr9:943443 | 0 | dispersed | |
| Cla07g00628 | Cla-Chr7:11889021 | Cla09g00096 | Cla-Chr9:943443 | 0 | dispersed | |
| Cla08g01611 | Cla-Chr8:28719089 | Cla09g00096 | Cla-Chr9:943443 | 0 | dispersed | |
| Cla09g00096 | Cla-Chr9:943443 | Cla09g00121 | Cla-Chr9:1241448 | 0 | dispersed | |
| Cla01g00962 | Cla-Chr1:13761077 | Cla09g00096 | Cla-Chr9:943443 | 3.58E-86 | transposed | |
| Cla01g01234 | Cla-Chr1:24647940 | Cla09g00096 | Cla-Chr9:943443 | 1.91E-150 | transposed | |
| Cla01g02485 | Cla-Chr1:38499272 | Cla09g00096 | Cla-Chr9:943443 | 2.17E-93 | transposed | |
| Cla05g01608 | Cla-Chr5:27377695 | Cla09g00096 | Cla-Chr9:943443 | 1.61E-177 | transposed | |
| Cla07g00778 | Cla-Chr7:21740772 | Cla09g00096 | Cla-Chr9:943443 | 2.08E-161 | transposed | |
| Cla08g01069 | Cla-Chr8:23380913 | Cla09g00096 | Cla-Chr9:943443 | 3.11E-157 | transposed | |
| Cla09g00814 | Cla-Chr9:8316911 | Cla09g00096 | Cla-Chr9:943443 | 0 | transposed | |
| Cla11g01151 | Cla-Chr11:24062722 | Cla09g00096 | Cla-Chr9:943443 | 3.11E-96 | transposed | |
| Cla03g01443 | Cla-Chr3:29980684 | Cla09g00096 | Cla-Chr9:943443 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla09g00096 | - | - | csv:101205194 | 1372.84 |