Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00096 ATGGCGAATTTCCATCGCTCTTCTTCACTTTTCTTCTTCTTCATCTTCTGTTTCGTCCCTGTAATTTTCTCTCGATCGCCGGATAATCAAGAGACATTCATCGTTCATGTCTCTAAATCGGAGAAGCCTTCTTTATTTTCCTCCCATCGTCACTGGCACTCTTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAACTACGAACATGCCGTTAATGGATTCTCCGCACGCATCACGGCTGCTCAGGCGGCGGAGCTGCGTCATGTTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACGACTCGGACGCCTCATTTCTTGGGACTGGCGGATAACCTAGGGCTCTGGCCTGACACGAATTATGCCGAAGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGGGAGGCCGAGTTTCTCCGATGAAGGTTTGTCTCCGGTTCCGGCAAGCTGGAAAGGCACCTGCGAGGCTGGGGAGGGATTTTCGGCTTCGACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTAACGGATACGAGTCTAATTTAGGAAGATCGCTTCGTTCTTCGGATTTCAAATCTGCTAGGGATTCGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAAAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGAATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTTCGATTCTGACATACTCGCCGCTATGGATCAGGCGATTGCCGATGGCGTTCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCGCCCGCGTACTATCGAGATTCCATTGCAATTGGAGCGTTTGGGGCAATGCAGCACGGTGTCGTCGTCTCTTGCTCCGCCGGTAATTCCGGTCCCGGTCCTTACACGGCTGTGAACATCGCTCCTTGGATCCTCACCGTCGGTGCCTCCACAATCGACAGGGAGTTTCTTGCCGATGTCATTCTCGGAGACGGCAGGGTTTTCAGCGGCGTGTCGCTGTACTCCGGCGAACCCCTTGGCGATTCCAAGCTTCCGTTGGTTTACGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATCCGGCGAAAGTCGCAGGAAAAATTGTCGTGTGCGACCGAGGAGGGAACGCCAGAGTCGCCAAAGGAGGCGCAGTGAAGTCCGCCGGTGGTCTTGGTATGGTACTCGCCAATACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCAGGAACAATGGTCGGTGAAATCGCCGGCAACAAGCTTAGAAACTACATCCATTCGGATCCGAATCCAACTGCTACAATCGTGTTTCGCGGAACTGTCATTGGCAATTCGCCTTCAGCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGGACGGCGGAGATTCTAAAACCAGATGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCAGTCTAAGCATCGATTCTCGAAGAGTCGAGTTCAATATCATCTCCGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTCGCCGCCTTGCTCCGTAAGGCTTTTCCGACGTGGTCACCGGCTGCTATCAAATCTGCTCTGATAACCACTTCTTACTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCTCCACCAGCAAAGAATCAAATCCATTCGTCCATGGCGCCGGCCACATCGATCCCAACAAAGCTCTGAATCCGGGCCTGATTTATGATCTCACTCCTCAAGACTACGTTTCATTTCTCTGCTCAATCGGTTACGACTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCCCAACTATGTGAGCACAAACTGAGCAATCCAGGCAACCTGAATTACCCATCATTCTCTGTCGTGTTCGACGGCGAGGAGGTGGTGAAATATACAAGAACAGTGACAAATGTAGGAGATGAAACTGATGTTTATGAAGTGAAAGTAGAATCCCCACAAGGAGTTGAAATCAGTGTTCTTCCCAACAAGCTGGAGTTCAATGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGGAATCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGCCACAATGTTAGGAGTCCAATTGCTGTCTCGTTCAACACTGGATCCATAGCTTCGATGGCCACAGCCCCTCAAACCTTTCTCACACTTCCTAATGGCTCAGTCTTACGAATCTCAGCCGCAAGACGAGGCCCAATCCCTCCTCCGCTCCGGCAACCGTCGGCCGTCACGTCGGTGGAGCCTTCTGCGGCGGAAGAAGCTGCCGACAGCCCGCCTCGGGGGCAGAAGGGCGCCGAGAACGGTGGCGATTTGGAGGTCAATTAA 2505 51.42 MANFHRSSSLFFFFIFCFVPVIFSRSPDNQETFIVHVSKSEKPSLFSSHRHWHSSILESLSPSPHPTKLLYNYEHAVNGFSARITAAQAAELRHVPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWPDTNYAEDVIIGVLDTGIWPGRPSFSDEGLSPVPASWKGTCEAGEGFSASTCNRKIIGARAYFNGYESNLGRSLRSSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCFDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGEPLGDSKLPLVYGGDCGSRYCYSGSLDPAKVAGKIVVCDRGGNARVAKGGAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRNYIHSDPNPTATIVFRGTVIGNSPSAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDSRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLSTSKESNPFVHGAGHIDPNKALNPGLIYDLTPQDYVSFLCSIGYDSRQIAVFVKDSSYSQLCEHKLSNPGNLNYPSFSVVFDGEEVVKYTRTVTNVGDETDVYEVKVESPQGVEISVLPNKLEFNAKKTTQSYEITFTKISGFKESASFGSIQWSDGSHNVRSPIAVSFNTGSIASMATAPQTFLTLPNGSVLRISAARRGPIPPPLRQPSAVTSVEPSAAEEAADSPPRGQKGAENGGDLEVN 834
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 943443 948697 - ClCG09G001040.2 Cla09g00096 279516
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00096 834 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252|GO:0006508
Cla09g00096 834 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 20 761 - -
Cla09g00096 834 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 110 IPR037045 -
Cla09g00096 834 ProSiteProfiles Serine proteases, subtilase domain profile. 108 612 - -
Cla09g00096 834 MobiDBLite consensus disorder prediction 790 834 - -
Cla09g00096 834 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 761 IPR045051 -
Cla09g00096 834 CDD PA_subtilisin_like 349 472 - -
Cla09g00096 834 Gene3D - 343 480 - -
Cla09g00096 834 SUPERFAMILY PA domain 363 465 IPR046450 -
Cla09g00096 834 Pfam Fibronectin type-III domain 661 757 IPR041469 -
Cla09g00096 834 Pfam PA domain 374 458 IPR003137 -
Cla09g00096 834 Gene3D - 629 760 - -
Cla09g00096 834 Pfam Subtilase family 134 581 IPR000209 GO:0006508|GO:0008236
Cla09g00096 834 SUPERFAMILY Subtilisin-like 109 616 IPR036852 GO:0004252|GO:0006508
Cla09g00096 834 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cla09g00096 834 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Cla09g00096 834 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cla09g00096 834 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Cla09g00096 834 CDD Peptidases_S8_3 108 578 IPR034197 -
Cla09g00096 834 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00626 Cla-Chr7:11788288 Cla09g00096 Cla-Chr9:943443 0 dispersed
Cla07g00628 Cla-Chr7:11889021 Cla09g00096 Cla-Chr9:943443 0 dispersed
Cla08g01611 Cla-Chr8:28719089 Cla09g00096 Cla-Chr9:943443 0 dispersed
Cla09g00096 Cla-Chr9:943443 Cla09g00121 Cla-Chr9:1241448 0 dispersed
Cla01g00962 Cla-Chr1:13761077 Cla09g00096 Cla-Chr9:943443 3.58E-86 transposed
Cla01g01234 Cla-Chr1:24647940 Cla09g00096 Cla-Chr9:943443 1.91E-150 transposed
Cla01g02485 Cla-Chr1:38499272 Cla09g00096 Cla-Chr9:943443 2.17E-93 transposed
Cla05g01608 Cla-Chr5:27377695 Cla09g00096 Cla-Chr9:943443 1.61E-177 transposed
Cla07g00778 Cla-Chr7:21740772 Cla09g00096 Cla-Chr9:943443 2.08E-161 transposed
Cla08g01069 Cla-Chr8:23380913 Cla09g00096 Cla-Chr9:943443 3.11E-157 transposed
Cla09g00814 Cla-Chr9:8316911 Cla09g00096 Cla-Chr9:943443 0 transposed
Cla11g01151 Cla-Chr11:24062722 Cla09g00096 Cla-Chr9:943443 3.11E-96 transposed
Cla03g01443 Cla-Chr3:29980684 Cla09g00096 Cla-Chr9:943443 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00096 - - csv:101205194 1372.84