Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00121 ATGGCTGCCCTTCTTCCAGCAATCTTTCTCTTCTCTCTCATCATCCCATTTTCTTCTTCTTCCTCCTCTTCGATCGATGTTTCAAAGAAGACCTTCATTGTGCAGGTTCACAAAGATGCCAAACCTTCTATTTTCCCGACCCACAAGCACTGGTATGAGTCTTCTCTAGCCTCCATTTCTTCAAACAAGGCAACGACGTCAAACCCAGATGCTTCTGGTACTGATGGAGCAGCCGTCATTCATACATATGAAACTGTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTGAGAAGCTTCAAACCTTCCCTCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCCTCACACAACTCGTTCCCCTGAGTTTCTTGGCCTTAAGACATCCGACAGTGCTGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATAGGTGTCATTGATACTGGTATTTGGCCGGAGAGGCAGAGTTTCAATGACCGCGATCTGGGTCCTATTCCTTCCAAATGGAAAGGCCAGTGCTTGGTAGCTAAAGACTTTCCAGCCTCCTCTTGCAACCGTAAACTCATTGGGGCTCGATTCTTCTGTAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGTACCGTTCGCCGCGAGATTCCGATGGCCACGGTACACACACAGCGTCCATTGCTGCAGGTCGTTATGTGTTTCCAGCTTCAACTTTAGGTTATGCTCGTGGTAAAGCCGCCGGAATGGCTCCTAAGGCCCGTCTTGCCGCCTATAAAGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATTCTTGCAGCTTTTGATGCTGCCGTTTCCGACGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTACCGTATTATCTCGATGCCATCGCTATTGGGGCTTTTAGAGCGGTGGCAGACGGCGTTTTTGTCTCCGCATCAGCCGGTAACGGTGGCCCAGGTGGGCTCACTGTGACTAATGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGTTATACTCGGTACTAGTGTCTACGGCGGACCGGCTTTAGTTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACCGAAGGCGGTGATGGATATTCTTCGTCTCTTTGCTTAGAAGGTTCATTGAACCCCAATTTAGTGAAAGGGAAGATTGTACTATGTGACAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGGTTGGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTAGCTGACTGCCACGTACTACCTGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATTCGCAAATATATTGCAGAAGCAGCGAAGTCTCATTCACCGCCAACCGCCACAATTTTGTTCAAGGGAACTCGGCTTGGAGTTCGGCCAGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTAAAGCCTGATGTGATTGCGCCAGGGTTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGACCCTCTGGAATTCCCACAGACAAGCGTACTACTGAGTTCAACATACTTTCTGGCACTTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCCCTGCTGAAGGCGGCACACCCTGGATGGAGTCCAGCAGCTATAAAATCAGCCTTGATGACCACAGCTTATACTTTGGACAACCGAGGCGAGACGATGTTAGATGAATCTTCAGGCAATACTTCCACGGTCTTGGACTTTGGAGCTGGCCATGTTCACCCACAAAAGGCAATGGACCCTGGTTTAATCTATGACCTGAACACATTTGATTATGTTGATTTCTTGTGTAACTCCAACTACACCACTAAGAATATCCAAGTCATTACAGGGAAGATTGCAGATTGTAGTGGGGCGAAAAGGGCTGGACATACTGGGAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAACATAAGATGTCTACACATTTCATAAGAACTGTGACTAACGTTGGAGACGCCAATTCTATCTATAAGGTATCAATAAAGCCACCAAGTGGAATTTCAGTGACGGTGGAACCAGAAAAGCTAGCGTTTAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAACATGAAGAGTGGTTCTATAGTTTGGACTGATGGAAAACACGAAGTCACAAGTCCTTTGGTTGTTACCATGCAGCAACCTCTGCAGTAG 2373 48.55 MAALLPAIFLFSLIIPFSSSSSSSIDVSKKTFIVQVHKDAKPSIFPTHKHWYESSLASISSNKATTSNPDASGTDGAAVIHTYETVFHGFSAKLSPFEVEKLQTFPHIASIIPEQVRHPHTTRSPEFLGLKTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGQCLVAKDFPASSCNRKLIGARFFCSGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVADGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSHSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTFDYVDFLCNSNYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVSIKPPSGISVTVEPEKLAFRRVGQKLSFLVRVQAMAVRLSPGSSNMKSGSIVWTDGKHEVTSPLVVTMQQPLQ 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1241448 1243820 - ClCG09G001300.1 Cla09g00121 279541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00121 790 Pfam Peptidase inhibitor I9 31 118 IPR010259 -
Cla09g00121 790 Pfam PA domain 386 474 IPR003137 -
Cla09g00121 790 Gene3D Peptidase S8/S53 domain 147 644 IPR036852 GO:0004252|GO:0006508
Cla09g00121 790 ProSiteProfiles Serine proteases, subtilase domain profile. 124 631 - -
Cla09g00121 790 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 8 789 - -
Cla09g00121 790 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Cla09g00121 790 SUPERFAMILY Protease propeptides/inhibitors 30 118 - -
Cla09g00121 790 Pfam Subtilase family 145 612 IPR000209 GO:0006508|GO:0008236
Cla09g00121 790 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Cla09g00121 790 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Cla09g00121 790 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Cla09g00121 790 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 8 789 - -
Cla09g00121 790 CDD PA_subtilisin_like 359 492 - -
Cla09g00121 790 Gene3D - 353 500 - -
Cla09g00121 790 Gene3D - 648 786 - -
Cla09g00121 790 SUPERFAMILY Subtilisin-like 120 635 IPR036852 GO:0004252|GO:0006508
Cla09g00121 790 CDD Peptidases_S8_3 118 597 IPR034197 -
Cla09g00121 790 Pfam Fibronectin type-III domain 679 783 IPR041469 -
Cla09g00121 790 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 120 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01160 Cla-Chr2:24979009 Cla09g00121 Cla-Chr9:1241448 0 dispersed
Cla09g00096 Cla-Chr9:943443 Cla09g00121 Cla-Chr9:1241448 0 dispersed
Cla09g00121 Cla-Chr9:1241448 Cla01g01692 Cla-Chr1:31854378 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00121 - - csv:101210434 1446.03