Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00135 | ATGACTTATCTCAAATTTGATTTGACTTTGTCAAAGGCCAATGGTAATGGTGTCTCACCATTGACAGAGAGCGAGAGAGCGAGTGAGATTCAGGAAAAGAGGGTGGTTGATTTGAGGCTCTCATTCCTGTTCCGGGCTGGGAAGAGGATGGATTGGAGGTGGAGGGAGCTGATATCTCTCATCATTCTCTGCATTCTAGGGTGGAAGCCTAGCTGCATTCAAGGAACCACAGATCCAACAGATGCCTCTGCTTTAAGGGTTTTGTACACCAGTTTAAACTCGCCCTCTCAGTTAACCCAGTGGAACGCAAATGGCGATGATCCTTGTGGACAATCATGGAAGGGAATTACTTGCTCCGGCTCACGGGTTACAGAAATAAACTTATCTGGCCTTGGACTCAGTGGATCGCTCGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAGTAACAATTTTGGAGGCGAGATTGTCTACAACCTTCCACCTAATCTAAAAAGACTAAATCTTGCACGAAACAACTTCAATAAAGGCATTCCTTATTCCGTTTCATTGATGACTTCTCTTCAATACTTAAATATCAGTCATAATCAGCTTCAGGATCCATTGAATGATGTGTATGGGCAGCTAACTTCCCTATCCACATTGGATCTATCTTTCAATGCTATGTCAGGCAACCTGCCTCAGAGTTTTAGCTCTCTTTCTAGCATCAGCACTATGTATTTGCAAAACAATCAGTACACTGGCACAATTGATGTCCTTGCAACTCTACCTCTTAATAACCTGAATGTTGAAAATAACCGTTTCACCGGATGGATCCCTGAACAACTGAAAAACATCAATCTGCAGACAAATGGCAACTCTTGGAACTCCGGTCCTGCACCCCCTCCTCCACCTGGTACACCCCCAGCCACCAGAAGAAACCGAAATCAACATTCAGGTGGCAGTCCATCAAATGGTGGTTCTAGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGGCATTGCAGGGATTATCATCTCCGTGCTCGTCGTTGGAGCTGTAGTAGCATTCTTCCTCGTCAAGAGGAGATCCAAGAGATCATCTACAGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAGTGACTGCAGCACAAGGTCATCTTATACATTATGAGATTGCATCTATACTTACATTGAAAATTCTTACTTTCGAGAGAAAGATATTCTGTCTTAATTCAAATATGCGCATCCCTGCTCTTTTTGATATGAGAGAGGTGGTCAAGAAAGAACATTTGAGTTTACAGTTTACAGTTGAGTTTTCTGCTCCATACCTGTTCGGCCTATTTTTCGGTGCCCAGAATAAACTAAAAACTTTAAATGTTAGGATGTCATGCGGAAACATTTTTTTCTTTTTCCAGGTTGCTCCTGTTTTCAAATATTGTTATGCAGAAACAAAGTCAGAAGAGACTTCCTCCACATTTTATCCAACATCATTTGACACTTCTGCTGCAATAAATCTTAAACCCCCACCTATCGATCGTCATAAATCATTTGATGAAGACGACTTCTCAAAACGAGCTGCAGTCAAGAAGGCTAGTGCTGCAGCTCCCATTAATGTAAAGTCATATTCCATAGCAGACCTTCAAATTGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCATTTGGACGTGTATATCGGGCTGAGTTTGACGACGGGAAGGTTCTTGCCGTGAAAAAGATAAATTCATCTGCACTACCTAGGGAATTATCTGAAGATTTCACTGACATTGTTTCTAAAGTCTCCCAGTTACACCATCCCAATATAACTGAACTCGTGGGTTATTGCTTAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCACAAAAATGGTTCGCTTTACGACTTATTACATCTATCAGATGAATACAACAAACCTCTGATATGGAACTCACGCATTAAGATTGCTTTGGGAACAGCGCGAGCATTGGAGTATCTTCACGAAGTGTGCTCCCCATCTATTGTTCATAGAAACGTCAAGTCTGCTAACATATTGTTAGATGCCGAACTCAGCCCCCACCTTTCTGACTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGTCAATCTTGAACTTAATAAATCTTATTTTTTCCGTGTCGTATACTTCAATATACAAATACACATTAATGTAATGTTTACCTTATTCTTAAAGTCTTCGAAGAGAAAAATCTGTATCAAAAAAATTTCCGAGGGTGCGTTGGATGGCAGTGCAAGTTCAGGATATGCTGCCCCGGAAGTTACCATGTCCGGTCAATATACTCTGCAAAGTGACGTTTACAGTTTTGGAGTAGTCATGTTGGAACTGCTGACTGGACGCAAACCATTCGACAGTTCAAGGGCGAGGATGGAGCAATCTTTGGTTCGATGGGCAACACCTCAGCTTCATGACATTGATGCTTTGACCAAGATGGTTGATCCCGAACTCAAAGGCCTTTACCCCGTTAAATCTCTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTTCAGACGGAACCTGAGTTCAGACCTCCAATGTCGGAGGTGGTCGAAGCGTTGGTCCGTTTGGTGCAGCGAGCAAACATGAGTAAGAGAACATATGGAAATGATAATGCAACATCTCCGAGAGGGGAGATGGGTGGGGAGGACACGCCATAA | 2718 | 42.83 | MTYLKFDLTLSKANGNGVSPLTESERASEIQEKRVVDLRLSFLFRAGKRMDWRWRELISLIILCILGWKPSCIQGTTDPTDASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGITCSGSRVTEINLSGLGLSGSLGYQLGSMTSVTNLDVSSNNFGGEIVYNLPPNLKRLNLARNNFNKGIPYSVSLMTSLQYLNISHNQLQDPLNDVYGQLTSLSTLDLSFNAMSGNLPQSFSSLSSISTMYLQNNQYTGTIDVLATLPLNNLNVENNRFTGWIPEQLKNINLQTNGNSWNSGPAPPPPPGTPPATRRNRNQHSGGSPSNGGSSEGQKSGISGGGIAGIIISVLVVGAVVAFFLVKRRSKRSSTDIEKLDNQPLQPLKVTAAQGHLIHYEIASILTLKILTFERKIFCLNSNMRIPALFDMREVVKKEHLSLQFTVEFSAPYLFGLFFGAQNKLKTLNVRMSCGNIFFFFQVAPVFKYCYAETKSEETSSTFYPTSFDTSAAINLKPPPIDRHKSFDEDDFSKRAAVKKASAAAPINVKSYSIADLQIATGSFNVENLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQLHHPNITELVGYCLEHGQHLLVYEFHKNGSLYDLLHLSDEYNKPLIWNSRIKIALGTARALEYLHEVCSPSIVHRNVKSANILLDAELSPHLSDSGLESFVPNADQVNLELNKSYFFRVVYFNIQIHINVMFTLFLKSSKRKICIKKISEGALDGSASSGYAAPEVTMSGQYTLQSDVYSFGVVMLELLTGRKPFDSSRARMEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP | 905 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1379013 | 1386251 | - | ClCG09G001440.2 | Cla09g00135 | 279555 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00135 | 905 | SUPERFAMILY | L domain-like | 77 | 283 | - | - | |
Cla09g00135 | 905 | SUPERFAMILY | Protein kinase-like (PK-like) | 539 | 873 | IPR011009 | - | |
Cla09g00135 | 905 | Gene3D | Transferase(Phosphotransferase) domain 1 | 635 | 895 | - | - | |
Cla09g00135 | 905 | MobiDBLite | consensus disorder prediction | 309 | 332 | - | - | |
Cla09g00135 | 905 | Pfam | Protein kinase domain | 557 | 871 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00135 | 905 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 | 758 | 898 | - | - | |
Cla09g00135 | 905 | MobiDBLite | consensus disorder prediction | 287 | 332 | - | - | |
Cla09g00135 | 905 | Pfam | Leucine rich repeat N-terminal domain | 79 | 119 | IPR013210 | - | |
Cla09g00135 | 905 | ProSiteProfiles | Protein kinase domain profile. | 556 | 876 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00135 | 905 | PANTHER | OS01G0253100 PROTEIN | 68 | 718 | IPR045271 | GO:0004714|GO:0006468 | |
Cla09g00135 | 905 | MobiDBLite | consensus disorder prediction | 885 | 905 | - | - | |
Cla09g00135 | 905 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 | 68 | 718 | - | - | |
Cla09g00135 | 905 | Gene3D | Ribonuclease Inhibitor | 78 | 305 | IPR032675 | - | |
Cla09g00135 | 905 | Pfam | Leucine Rich repeat | 191 | 205 | IPR001611 | GO:0005515 | |
Cla09g00135 | 905 | Pfam | Leucine Rich repeat | 145 | 163 | IPR001611 | GO:0005515 | |
Cla09g00135 | 905 | PANTHER | OS01G0253100 PROTEIN | 758 | 898 | IPR045271 | GO:0004714|GO:0006468 | |
Cla09g00135 | 905 | Gene3D | Phosphorylase Kinase; domain 1 | 519 | 633 | - | - | |
Cla09g00135 | 905 | ProSitePatterns | Protein kinases ATP-binding region signature. | 562 | 585 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00126 | Cla-Chr2:1403708 | Cla09g00135 | Cla-Chr9:1379013 | 1.13E-38 | dispersed | |
Cla09g00135 | Cla-Chr9:1379013 | Cla10g01655 | Cla-Chr10:32235033 | 3.35E-41 | dispersed | |
Cla07g01353 | Cla-Chr7:30688980 | Cla09g00135 | Cla-Chr9:1379013 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80781 | PF00069 | Pkinase | 6.90E-35 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00135 | - | - | qsu:112033551 | 582.793 |