Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00190 | ATGGATTTCTGGCCAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTAGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTGCTAGCTGGGTTTTTTGTTATCCCTTGGATGTATTGAAGACTAGAATTCAGGGTCAGACACAAAGTTCACCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACATTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA | 936 | 48.82 | MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSPRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1899539 | 1900671 | - | ClCG09G002070.1 | Cla09g00190 | 279610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00190 | 311 | PANTHER | CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN | 1 | 303 | - | - | |
Cla09g00190 | 311 | SUPERFAMILY | Mitochondrial carrier | 12 | 295 | IPR023395 | - | |
Cla09g00190 | 311 | Pfam | Mitochondrial carrier protein | 111 | 202 | IPR018108 | - | |
Cla09g00190 | 311 | Pfam | Mitochondrial carrier protein | 11 | 96 | IPR018108 | - | |
Cla09g00190 | 311 | Pfam | Mitochondrial carrier protein | 213 | 303 | IPR018108 | - | |
Cla09g00190 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 104 | 201 | IPR018108 | - | |
Cla09g00190 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 212 | 300 | IPR018108 | - | |
Cla09g00190 | 311 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 1 | 303 | - | - | |
Cla09g00190 | 311 | Gene3D | Mitochondrial carrier domain | 105 | 310 | IPR023395 | - | |
Cla09g00190 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 13 | 92 | IPR018108 | - | |
Cla09g00190 | 311 | Gene3D | Mitochondrial carrier domain | 4 | 101 | IPR023395 | - | |
Cla09g00190 | 311 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085 | |
Cla09g00190 | 311 | PRINTS | Mitochondrial carrier protein signature | 119 | 137 | IPR002067 | GO:0055085 | |
Cla09g00190 | 311 | PRINTS | Mitochondrial carrier protein signature | 174 | 192 | IPR002067 | GO:0055085 | |
Cla09g00190 | 311 | PRINTS | Mitochondrial carrier protein signature | 221 | 243 | IPR002067 | GO:0055085 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla07g01247 | Cla09g00190 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00190 | Cla-Chr9:1899539 | Cla09g01136 | Cla-Chr9:12725180 | 9.83E-54 | dispersed | |
Cla07g01247 | Cla-Chr7:29498031 | Cla09g00190 | Cla-Chr9:1899539 | 5.64E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00190 | K15109 | - | csv:101222165 | 545.814 |