Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00209 ATGGCTACTGCGACTGAAGAAGAGGTTGATTATGAGAGTGATCCGGAGGAGGCGAAGCGGTCACTTGCGATGCGGAGGCGGGAGGCGAGTGATGATGAGGAGGGTGAAGGAGAAGGGGCAGAAGGGAGGAGGACGATTCGGAGGATGGGGATTCATTCGGATGATTCGGATGGTCAGGGTGGAGCTGCGGAATACGACGATGAGGACGAATTGGGGGAAGATGTAGATGAAGATGAGGTTGGTGAAGGAGTTGAGGACGTTGATGAGGGGGAGGAAGTTGACGAAGAGGAAGATGAGGAGAGGTATGGGGATAGGAAGTCGGGCGGTCATGGTGAATTGGATGCCGCCTCCGGCAATGTATCGAAGGAACTGGACGAGGATGGAAGACCATTAGCAGAAGGACCAACTGATTTGCACGACGAAAATTTAGAAGGCGAATTTGATGAGGAGAAGAAGGTGAATGAGCCCTTCGCTGTTCCCACTGCCGGGGCTTTCTATATGCATGATGATCGGTTTAGGGACAATGCAGGTGGTCGACACAGGAGAACACATGGTGGAAGGAGATTGTGGGAGTCCAAGGATGACATGAAATGGGGTCATGACAAGTTTGAAGAAATGACTTTGCAAGAAAGGCATCGTGATGAGAGGAGAACTTCCAAGGGCCATCCACGAGGTCGGGGTAAAAGTCGAGGTGTGGATCATGGTTATGCTCGAGGGAACAGATCTCGAGCATACAATAAAAATAACACTCAAAACAATGCTCCCAAAGTTAATTTTTGTTACAGCCCATGGGCTCTTACTCATTTAGTATATGTCCATTTTGCGTATGACCTCAGATCTGTGAAGCCTCCTGAGAAGGCATCTCATAATAATACAGGGAGATCCCTTGCGCCCTCTCCAAATGTAGAAGGTGAGCCAATCTCTGTTAGGAAACATGCCTTTTCATCAAGCCTGAATTCTGCTTCTCCACCTTTCTACCCTTCAGGGACGTCTAGTAAAAACATCCCTAAAGTGGAGAAAAGAGAAGTACAAGCTGGACTTCCTGAAAAGAATATGTATGATGATAGTCGCTCTATCCCACAATCGAGTGTAATGGTAGATGGAAAGCATGTAGTTGATGCTGTTGCTATGGAGAGGATTTACATAAATGATTCAACCAATCAGTCTCTAGGAAATCCTTTATCTAAGCCATCTTCTGGTTCTTCAGTGATCAATAATGCTCAAATTCCCCAATCTAGACCTCATGGAAGGGGTGCTGTTCTAGGATCAACTGGCTACCCTCCTGCATCACTCCATAGCCAAGTTAACAAGGTCTCTTTACCTACTCAATCACATGGTGTAGCACGAACTCCTGGTCAAACTCGGGTTCAATCTTCTGTTCAGGTTCCTGTCCAGCAGTTGGGTCAGCGACCTGGTAGTGGATCTCAGTCTTCATCTCCACCAAAAACTTCCACGTCAGTTAACTCACTTGAATCCGGAGAGGGTGATTCTTCTTCAGAATCAAGCAAATTGAAAACTGCTTTGGTTGGAAAGGGAAAGGGTGTGACCCAGGGTATTGGTGCTGGTTCCTTTATTTATGGTGGGGCTCAGATTATGGGAACCTCTGGGAACATGAATATTACTCATGGAGACCAGAACTTTCCTCATACTCCAGCATTTTTGCCAGGTAAAGTTTACATTACATATCACAAGTGTTATCTTTATGGGAAATGGAGAATGATAAAATGCATGGGTTCTTGTGGAGCCCTGTTATCATTTAAAATAAAATTGCTCTTTCAGTTTGATATGGTGCCATGTGCAATCGAGTTCATGAATTTTCTCGATTTCTTTATTGTCTGTGCTATTGATCTTTTGTCAATGAACATTTGTGAAGTTATGCAATTTGGAGGTCAGCATCCTGGTGGCATTGGAGTTCCTGCCGTTGGCATGGCATTTCCAGGATATGTTGCCCAGTCCCAACTTGGCATGGGAAATTCAGAAATGACATGGTTACCAGTTTTGGCTGGTGCAGCTGGGGCTCTGGGAGCTACATATTGTTCGCCTTATATAGCTATGGATGGGGCTTATCATGCTCGATCCTCAGGGCAGACATCATCTGCGGGAACGTTGAGGTTAGTATGTTGTACTGGTTTTGATAATTGTGGATGCTGTTGTCTTGTTGGAAAGCTAACAAGTATTTACTATCAATATGCTCTTTGTTTAGAATTATGTTGGGGATACACAGTTGCAAAGAAAATAACACAAACAAATCCAGTAACGAGGCAAAGCCTTCACCGAATGAACTTGAAAGTGATGATGTTGGACAGCGACAGAATAAGCCACGCAGTTTGGTGTAAAACTTTGCCTTTCTTTTTCTCATTTCAGATATTCAGAGATGAACTTTGGCCAATGAAAAGAAGTAACTATGTTTGGGTGTACCTCCTCACCCAGGAGGGAATGGAGATCAAAGAAAAGAAGAGAATTTCAAGTATCTCCTCTCCATTAATGTCATCCTCTTCGATGGCTATCCTCCTGGTTTTTCTTTGTTTCATTTTTAGCGATCCCAGCACAGCATTCGTAGCCGGGGCGGGCACTTCCTTCATTCCCAAAGATAATTTTCTCATTGACTGTGGTGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGAGTGTTCAAAACTGATGAGCAATCCAAGCAACTCTTAGATGCCAAGGATGATATCATAGCAACCGCTGCACCGGATAAGAAGGCACCGTCCCCGGTCGATTTGACAGCAAGAGTTTTCCTCCAAGAAGCTACTTACATTTTTCAGATGGCAGAGCCTGGATGGCATTGGGTGCGCCTACATTTCATGCCTGTTAAAAGCAATGACTTCGATCTCTTGCAGGCTAAATTTTCAGTAGCTACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAATATCACTGAACCAAAACTGTCAATCAAGTTCTTCCCTATGAGGAACTCAGCCGCTTTCATCAATGCCATCGAGGTCGTTTCGGCTCCGGTGGACTTGATTGCTGACTCGAATGTGGAGCTGTCTCCAGTTGGGACTATTGAGGGCCTGACGAAATATGCATTTCAGACATTGTATAGGTTAAACATGGGAGGACCTATAATCAATCCAAGAAATGACACTCTTGGGAGGACATGGGAGACGGATGAAGTTTACAGGACACCCAAAGTTGCTGGTAGGAATGTGGTTGTTGAGACCAACACCATCAAATACCAAGGAGGATTGAAAGAAACAGGCATGTTAATTGCTCCTCCAAGTGTTTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTTAGTGTACCAAATTTCAATATCACATGGAAATTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTCAGCAAAGTACTCAATAATCTGTATTTTAATGTATATGTGAACGGGAAGGCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATACTACAAGGATGTTGTGGTTAATGCTTCCCTGATTGTAGATGGACTGACAGTTCAAATTAGTCCAGCTAATGTCGAAACCGGTGATGCGAATGCCATTCTAAATGGCATAGAGGTATTGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAGGTCGGCAAATGGGTCTAATCGTGGCACGGTCGCGGCTGTTGGGTTTGCGATGATGTTTGGGGCGTTTGTTGGGCTCGGTGCCATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCCTGGTTGCTTCCTGTACATGCTGGTGACTCAAGCTTTATGACAAGTAAGACTTCATATGGGTCACACAAGACCAACATTTACTCCTCTACTTTAGGCCTTGGTAGGTTCTTCACTTTGGCAGAACTACAAGAGGCCACAAAGAACTTTGATCCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACCAAAGTTGCAGTTAAGAGAGGAAATCCACAATCTGAACAAGGCATAACAGAATTCCAAACAGAAATTCAAATGCTTTCCAAACTCAGACACAGGCATTTGGTTTCTTTGATCGGTTACTGTGATGAAAACGCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGCCCATTCAGAGATCATTTATATGGAAAGGACTTGTCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATCGGAGCGGCTCGAGGCCTTCATTACCTTCACACAGGAACAGCCCAGGGAATCATCCACCGTGATGTCAAAACAACCAACATTTTACTCGACGAAAACTTCACCGCCAAAGTCGCCGATTTCGGGCTGTCAAAGGATGCTCCAATGGGGCAAGGACATGTCAGTACTGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTGCTTGAGGCTTTGTGTGCAAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTGAACTTGGCTGATTGGGCAATGCAATGTAAGAAAAAAGGGTGTTTGGAAAAGATAATGGATCCCCTTCTAGCTGGAGCCATAAATCCTGAGTCCATGAAGAAGTTTGCAGAAGCAGCAGAGAAGTGTCTTGCTGAACATGGTGTAGATAGGCCAAGCATGGGGGATGTATTGTGGAATTTGGAGTATGCATTACAACTTCAAGAAGCATTCTCACAAGGCAAGACTGAAGATGAAAACAAAGCTGCAGGCACAGCAACCGTTTCCCCCGCTACCCCTACCACTGTTGATGCTTCGACAAATGCACCGAACTCCGGCAACCGCCCTGTTGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTACAAGCCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 5064 44.53 MATATEEEVDYESDPEEAKRSLAMRRREASDDEEGEGEGAEGRRTIRRMGIHSDDSDGQGGAAEYDDEDELGEDVDEDEVGEGVEDVDEGEEVDEEEDEERYGDRKSGGHGELDAASGNVSKELDEDGRPLAEGPTDLHDENLEGEFDEEKKVNEPFAVPTAGAFYMHDDRFRDNAGGRHRRTHGGRRLWESKDDMKWGHDKFEEMTLQERHRDERRTSKGHPRGRGKSRGVDHGYARGNRSRAYNKNNTQNNAPKVNFCYSPWALTHLVYVHFAYDLRSVKPPEKASHNNTGRSLAPSPNVEGEPISVRKHAFSSSLNSASPPFYPSGTSSKNIPKVEKREVQAGLPEKNMYDDSRSIPQSSVMVDGKHVVDAVAMERIYINDSTNQSLGNPLSKPSSGSSVINNAQIPQSRPHGRGAVLGSTGYPPASLHSQVNKVSLPTQSHGVARTPGQTRVQSSVQVPVQQLGQRPGSGSQSSSPPKTSTSVNSLESGEGDSSSESSKLKTALVGKGKGVTQGIGAGSFIYGGAQIMGTSGNMNITHGDQNFPHTPAFLPGKVYITYHKCYLYGKWRMIKCMGSCGALLSFKIKLLFQFDMVPCAIEFMNFLDFFIVCAIDLLSMNICEVMQFGGQHPGGIGVPAVGMAFPGYVAQSQLGMGNSEMTWLPVLAGAAGALGATYCSPYIAMDGAYHARSSGQTSSAGTLRLVCCTGFDNCGCCCLVGKLTSIYYQYALCLELCWGYTVAKKITQTNPVTRQSLHRMNLKVMMLDSDRISHAVWCKTLPFFFSFQIFRDELWPMKRSNYVWVYLLTQEGMEIKEKKRISSISSPLMSSSSMAILLVFLCFIFSDPSTAFVAGAGTSFIPKDNFLIDCGANKELGALPDGRVFKTDEQSKQLLDAKDDIIATAAPDKKAPSPVDLTARVFLQEATYIFQMAEPGWHWVRLHFMPVKSNDFDLLQAKFSVATEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFFPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLTKYAFQTLYRLNMGGPIINPRNDTLGRTWETDEVYRTPKVAGRNVVVETNTIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLIRFHFCDIVSKVLNNLYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVETGDANAILNGIEVLKISNSVNSLDGEFGVDGRSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDLSPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLAGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAAGTATVSPATPTTVDASTNAPNSGNRPVVQPEQNRQPAEVQAIDDHSGSAMFAHFSNLNGR 1687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2085156 2095352 + ClCG09G002280.2 Cla09g00209 279629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00209 1687 PANTHER BNAC03G60370D PROTEIN 850 1664 - -
Cla09g00209 1687 Pfam Protein tyrosine and serine/threonine kinase 1341 1601 IPR001245 GO:0004672|GO:0006468
Cla09g00209 1687 SMART serkin_6 1336 1608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00209 1687 MobiDBLite consensus disorder prediction 427 503 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 210 250 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 1 155 - -
Cla09g00209 1687 CDD STKc_IRAK 1342 1606 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 386 412 - -
Cla09g00209 1687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1456 1468 IPR008271 GO:0004672|GO:0006468
Cla09g00209 1687 ProSitePatterns Protein kinases ATP-binding region signature. 1342 1364 IPR017441 GO:0005524
Cla09g00209 1687 MobiDBLite consensus disorder prediction 317 334 - -
Cla09g00209 1687 Pfam CASC3/Barentsz eIF4AIII binding 138 228 IPR018545 GO:0003729|GO:0006397|GO:0035145
Cla09g00209 1687 Gene3D Phosphorylase Kinase; domain 1 1297 1411 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 386 503 - -
Cla09g00209 1687 Gene3D Transferase(Phosphotransferase) domain 1 1412 1633 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 1618 1663 - -
Cla09g00209 1687 Gene3D - 865 1019 - -
Cla09g00209 1687 Gene3D - 1040 1226 - -
Cla09g00209 1687 SMART Btz_2 124 231 IPR018545 GO:0003729|GO:0006397|GO:0035145
Cla09g00209 1687 PANTHER OS07G0166700 PROTEIN 850 1664 IPR045272 GO:0004714|GO:0006468
Cla09g00209 1687 MobiDBLite consensus disorder prediction 284 305 - -
Cla09g00209 1687 ProSiteProfiles Protein kinase domain profile. 1336 1608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00209 1687 MobiDBLite consensus disorder prediction 317 338 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 60 99 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 14 54 - -
Cla09g00209 1687 SUPERFAMILY Protein kinase-like (PK-like) 1320 1603 IPR011009 -
Cla09g00209 1687 Pfam Malectin-like domain 868 1223 IPR024788 -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 119 155 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 210 237 - -
Cla09g00209 1687 MobiDBLite consensus disorder prediction 1618 1674 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02008 Cla-Chr1:34704902 Cla09g00209 Cla-Chr9:2085156 2.55E-72 dispersed
Cla06g01573 Cla-Chr6:29289936 Cla09g00209 Cla-Chr9:2085156 0 dispersed
Cla09g00209 Cla-Chr9:2085156 Cla11g01292 Cla-Chr11:26481206 7.70E-171 dispersed
Cla09g00209 Cla-Chr9:2085156 Cla11g01796 Cla-Chr11:31629607 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80783 PF12819 Malectin_like 5.80E-36 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00209 - - csv:101220967 1634.39