Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00231 ATGACTATAGCTCAGCTCACCAACAATTTCAAAGCTAATTCATTTCCTCGAAACAACTATCCAAATTGCAAACCAAAAAGAGTTGATCTCTGGAGTTTTCATCAGTTCCATAACAGAAGGTCAAGGTGCAATTTGGGAATGGCGACCAGCAACGAAATCATGTTTAATTGCTTTGTTCTGGTTTTGCTTCTGCCGTTTTCAAACGCCCAATCTGACGTATTGGCACAAGGCCAAAAACTAACACCTGAGTCTACGCTAATTTCGGCCACGGAGACTTTTTCGCTCGGGTTTTACAGTCCTAGCCTATTGAACAACAGTTACATAGCAATTTGGTACACTAGAGATTCACAGAATCCAGTGTGGATTGCCAATCGTAATTTTGCATTTCCCAGAGATTTTGGGACACCCTGTCTCACAATTGACAGCAATGGCAGCTTGAAGATTGTCCCTAAAGAAGGAAAAGGAAGAAATGGCTATAATTTCTATCTCTTTGAAGTTGAAGAACCCACCAACAGCAGCGCCATTCTTCTAGATAGTGGCAACTTTGTATTGGGTGTGTTGAATCCAGATGGGTCAATTAAGCGACAGCTATGGCAGAGTTTTGATCATCCAACAGACACTCTTCTTCCTGGGATGAAGCTTGGGATCAACCACAAAACTGGAGCCACTTGGTCTATAACATCCCGAAGAAGTGACTATTCTGTTCTATCAGGTTCTTTTACCCTCATAATGAATCCCAACAATACAAATCAGTTGCTGATATTACTTAGAGGAGCCATTTTCTGGACCAGTGGGAACTGGCAGGACGATCGATTTGAGTTCTCGGAAGAACTTTCCAACATTAACAATCGAGAATTCATGTTCAGTCGATTTTCAAATGAGAACGAGACATTTTTCAATTACTCCACCTCCAATCTCTTTCAATTGCCTAACCAGAACACGGGATTGATTGAAGTTCAAACCTTATTGAGATTGGGGAACGACGGGAAATTGGTGGGGCGTAATTCGAATTCAGAAGTTGAATGTCCCTATTTTGAAAATGAGTTGTTTGAGCCTAAGAATGTTTCTGAAGGTGGGTGTGTGGGGAAAACACAGCACAAAGTACCCGAGTGCCGAAATCCACCAAAACAGTTTTCCACTTCACAGAGATTTGGAAACATGGAAGGAAATGGTTCGAGGTTCAGAGAAAGTGAGAACCTGACCATTTATGATTGCGAAAAGAATTGCATTTCAAGCTGTGATTGCATTGCCTTTAGTTCTACAAACGAAGAAGGCACAGGCTGTGAGATGTGGAATGTGGGCGCAACGTTTATTCCAGTGGAGGGAGGCAAACGGATTATTTGGTCTCTTGAGGTGACTGAAGGGAAAGCTATTGGAAAAATGAGGAAGGATTCTGAACATCAAAATTTTCTACAAGAAATGGGGGCCAAATCTAAGAGTATTAACATTCTAACAATGAACAAGCAAAGAAGAGACTTAAAGAACTCCGAATTGCAGTTTTTCAGTTTTAGAAGTATAGTTTCTACAACAAACAATTTCGCTGACGATTGTAAGCTCGGACAAGGTGGGTTTGGACCAGTTTATAAGGGAAGTTTGGCCGATGGCCAAGAAGTTGCCATTAAAAGACTTTCAAAGAATTCTGGACAAGGGCTAGAGGAGTTCAAGAATGAAGTCATACTGATTGCCAAACTGCAACACACTAATCTGGTTAGGCTTATTGGTTGCTGCATTCATAAAGAAGAGAGGTTATTGGTGTATGAGTACATGCCCAACAAAAGCCTTGACTCCTTCCTCTTTGCTAATTCTAGATTGGGACAAACGCCTACACATAATCCAGGGATAGTTCAAGGACTACTCTACCTTCACAACTACTCGAGATTACAAATAGTTCATCGAGATTTAAAGGTCAGCAACATCTTGCTTGATGATGAGATGAATGCAAAAATATCAGATTTTGGCATGGCCAAAATCTTTAATCTCACAGAGGAAGAAGCAAATATTAATCACATTGTTGGTACATTGGGTTATATAGCACCTGAAAATGCAATGGGGGGCATTTCCTCCCTAAAATCAGATGTTTACAGCTTTGGAGTGTTATTATTGGAGATCATAACAGCTCAAAAAAACTACAACAATTATGATGTGGAACGACCTATGAATCTCATTGGATATGCATGGGAAGTGTGGGTGAATGGTAGAGGAGAAGAATTAATTGATCCAACTTTGTGCAACTCTGATCAGAAACCAAAGGCTCTAAGATGCATCCATGTTAGTCTTCTATGTGTCCAACAAATACCAACAGATAGACCTACCATGCTTGATGTTTATTTCATGATTCAGAATGATTCTACTCAACTTCCATTGCCAAAACAACCTCCGTTTTTCATCACCCAGAACTCCAAACTGGAAGTGGTGACAGATGGCATTGAACTCAAATCAGAATCAACAACAGAAATATGTTCTTCAAATAGTATGTCAGTTTCCATGATGGTTGCGAGATGA 2502 40.37 MTIAQLTNNFKANSFPRNNYPNCKPKRVDLWSFHQFHNRRSRCNLGMATSNEIMFNCFVLVLLLPFSNAQSDVLAQGQKLTPESTLISATETFSLGFYSPSLLNNSYIAIWYTRDSQNPVWIANRNFAFPRDFGTPCLTIDSNGSLKIVPKEGKGRNGYNFYLFEVEEPTNSSAILLDSGNFVLGVLNPDGSIKRQLWQSFDHPTDTLLPGMKLGINHKTGATWSITSRRSDYSVLSGSFTLIMNPNNTNQLLILLRGAIFWTSGNWQDDRFEFSEELSNINNREFMFSRFSNENETFFNYSTSNLFQLPNQNTGLIEVQTLLRLGNDGKLVGRNSNSEVECPYFENELFEPKNVSEGGCVGKTQHKVPECRNPPKQFSTSQRFGNMEGNGSRFRESENLTIYDCEKNCISSCDCIAFSSTNEEGTGCEMWNVGATFIPVEGGKRIIWSLEVTEGKAIGKMRKDSEHQNFLQEMGAKSKSINILTMNKQRRDLKNSELQFFSFRSIVSTTNNFADDCKLGQGGFGPVYKGSLADGQEVAIKRLSKNSGQGLEEFKNEVILIAKLQHTNLVRLIGCCIHKEERLLVYEYMPNKSLDSFLFANSRLGQTPTHNPGIVQGLLYLHNYSRLQIVHRDLKVSNILLDDEMNAKISDFGMAKIFNLTEEEANINHIVGTLGYIAPENAMGGISSLKSDVYSFGVLLLEIITAQKNYNNYDVERPMNLIGYAWEVWVNGRGEELIDPTLCNSDQKPKALRCIHVSLLCVQQIPTDRPTMLDVYFMIQNDSTQLPLPKQPPFFITQNSKLEVVTDGIELKSESTTEICSSNSMSVSMMVAR 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2360162 2363605 - ClCG09G002610.1 Cla09g00231 279651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00231 833 Pfam PAN-like domain 398 432 IPR003609 -
Cla09g00231 833 SMART blect_4 71 204 IPR001480 -
Cla09g00231 833 SMART serkin_6 513 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00231 833 Pfam D-mannose binding lectin 119 230 IPR001480 -
Cla09g00231 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Cla09g00231 833 Gene3D Phosphorylase Kinase; domain 1 486 588 - -
Cla09g00231 833 Gene3D - 65 202 IPR036426 -
Cla09g00231 833 Pfam Protein kinase domain 516 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00231 833 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 119 800 - -
Cla09g00231 833 ProSiteProfiles PAN/Apple domain profile. 371 452 IPR003609 -
Cla09g00231 833 Gene3D Transferase(Phosphotransferase) domain 1 589 787 - -
Cla09g00231 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 119 800 - -
Cla09g00231 833 ProSiteProfiles Bulb-type lectin domain profile. 71 197 IPR001480 -
Cla09g00231 833 CDD B_lectin 80 204 IPR001480 -
Cla09g00231 833 SUPERFAMILY Protein kinase-like (PK-like) 497 802 IPR011009 -
Cla09g00231 833 ProSiteProfiles Protein kinase domain profile. 513 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00231 833 PIRSF SRK 446 833 IPR024171 GO:0004674
Cla09g00231 833 PIRSF SRK 46 484 IPR024171 GO:0004674
Cla09g00231 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 119 229 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00192 Cla-Chr9:1906317 Cla09g00231 Cla-Chr9:2360162 0 dispersed
Cla09g00231 Cla-Chr9:2360162 Cla03g00498 Cla-Chr3:5550542 8.75E-134 dispersed
Cla09g00231 Cla-Chr9:2360162 Cla05g01568 Cla-Chr5:26537136 4.64E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80784 PF00069 Pkinase 6.00E-43 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00231 - - csv:101221041 1323.15