Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00243 ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAGCGGTGAGAAAGGACAGCTAACACAGTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTAATTAGGAAAGTACAGGAAGAAGGATTCGATCTTCAGACAACTAAGAATGAAGATCATTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGTAGGGTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCACGTCTGAAAGAATATATGTCAAAACTGGAGTTGGATTTGACAGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGGGTGCTTGATGATATCGGTGAAGGAATCGTATTGAGTGATGATAAAACAGCAAATTTTGCGCTTCATTCCATACATTTTCTTAAACGAACAGACGCTGAACAATACATCTCACGGTTGTTAGCAAGCGATGTGTTTCCTGCATCTGTTGTGAAAGCAATTCTATATCCTGGAGCCATTGCAAAAGCCATCTTTAACAACAAACCTATTCCATCCTTTAATAGCTTGCCAAAGCTATACAAGTTTATCCATGTTAAACCAACAGCTTTTCCTCTCACCTCGGATCTCCATCACCTAGAGACACTTACTTTGGATTTCGTCCGAAAAACATCGTGCGAGACTTGTTTACATAGTACAATTATCAATACATCAACCCTGAAAGTTTACGGGTATAAATTGATTTTGAATTTTTGTATACAATTTAAGATGGGAAGTTTTGATGATGATGTTGAGTTGAAGCAGGTTATTGCAGGAAGTTATTTGGCAGTAGGAGGAGGTGTCATAGGAATGGTTAAAGCGGGGAGTGGGAGAATGAGTCTATTTGGTTGCCTTATCGCAATGTGGGGAATTGTTTGGAGGAAATCTTCAAATTTAAATCCCAATAAGGAAATTGGCCAAATCTATCCGACCATGTTTCTTGCTCTGCTTTTGGCTTTCTTGTCTGTTAGGAAGGATGTGAGGAGAATAGTACGTACCCTCAAACCTCAATCCAACCCTTTTTCTTCATGGAACAAACACAAGCACAAATGA 1209 39.87 MYGRKACQLVKELASGEKGQLTQFNSDLFEQVISECQQHHLELQSLIRKVQEEGFDLQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRLLASDVFPASVVKAILYPGAIAKAIFNNKPIPSFNSLPKLYKFIHVKPTAFPLTSDLHHLETLTLDFVRKTSCETCLHSTIINTSTLKVYGYKLILNFCIQFKMGSFDDDVELKQVIAGSYLAVGGGVIGMVKAGSGRMSLFGCLIAMWGIVWRKSSNLNPNKEIGQIYPTMFLALLLAFLSVRKDVRRIVRTLKPQSNPFSSWNKHKHK 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2431159 2437430 - ClCG09G002740.2 Cla09g00243 279663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00243 402 Pfam GINS complex protein 56 117 IPR021151 -
Cla09g00243 402 CDD GINS_A_psf1 3 137 IPR005339 GO:0000811|GO:0006260
Cla09g00243 402 SUPERFAMILY GINS helical bundle-like 1 147 IPR036224 -
Cla09g00243 402 Gene3D - 1 135 - -
Cla09g00243 402 PANTHER PARTNER OF SLD5 1 194 IPR005339 GO:0000811|GO:0006260
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla07g01221 Cla09g00243 CCT
Cla07g01221 Cla09g00243 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01322 Cla-Chr8:26116163 Cla09g00243 Cla-Chr9:2431159 1.92E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00243 K10732 - csv:101205409 378.637