Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00303 | ATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGATGATGGTGAGAATGAAAGACTTCGGTATGGCCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTACGGTTCATCTGAATCTGAGATTGTCGTTAAGTTTGGGATTGGAACCATTTTCTGAAGACTCTGAAATTGATCTACATTCTACACATTCTAAAAGTTGTGTTACATATGGATCCATTCTCACCCTACTTAAGTTTCAGCATGCAGCCTATCTAGATTTGGACACTTCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTATCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCTCTGCAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGTAGTGAAGCTAACAACCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCCTGTGTTGCAATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGTCAGGCATATAATCTATCCAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCCGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCTCGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACTGCCAATCCAGATGTGACAACTGTTGAGCTTTGTGAGGACGACGAGTTTCTTGTTATTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAACTGGTTGACTACATTGGAGATCAACTAAAATCGGAAAGTAAACTCTCAGTCATTTGTGAGAGAGTGTTTGACAGATGCTTGGCACCCACAGCTGGCGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTTAAGAAACCCTTCAACAACCCAAATGCTGCTTCTACTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAAACGTTGTCTGGTCTGAATGAAGGCTCTTCGAAGACTTAA | 1230 | 44.23 | MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDATVHLNLRLSLSLGLEPFSEDSEIDLHSTHSKSCVTYGSILTLLKFQHAAYLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKGSEANNQVDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKSESKLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKPFNNPNAASTSAEELPSSSNQTLSGLNEGSSKT | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2908885 | 2913460 | - | ClCG09G003390.1 | Cla09g00303 | 279723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00303 | 409 | CDD | PP2Cc | 23 | 374 | IPR001932 | - | |
Cla09g00303 | 409 | SMART | PP2C_SIG_2 | 78 | 374 | IPR001932 | - | |
Cla09g00303 | 409 | SMART | PP2C_4 | 13 | 372 | IPR001932 | - | |
Cla09g00303 | 409 | MobiDBLite | consensus disorder prediction | 382 | 409 | - | - | |
Cla09g00303 | 409 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 374 | IPR001932 | - | |
Cla09g00303 | 409 | ProSitePatterns | PPM-type phosphatase domain signature. | 98 | 106 | IPR000222 | GO:0043169 | |
Cla09g00303 | 409 | PANTHER | PROTEIN PHOSPHATASE 2C | 54 | 387 | IPR015655 | GO:0004722|GO:0006470 | |
Cla09g00303 | 409 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 40 | IPR015655 | GO:0004722|GO:0006470 | |
Cla09g00303 | 409 | SUPERFAMILY | PP2C-like | 3 | 376 | IPR036457 | - | |
Cla09g00303 | 409 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 54 | 387 | - | - | |
Cla09g00303 | 409 | Pfam | Protein phosphatase 2C | 91 | 150 | IPR001932 | - | |
Cla09g00303 | 409 | Pfam | Protein phosphatase 2C | 203 | 359 | IPR001932 | - | |
Cla09g00303 | 409 | Gene3D | - | 1 | 375 | IPR036457 | - | |
Cla09g00303 | 409 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 40 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00303 | Cla-Chr9:2908885 | Cla09g00444 | Cla-Chr9:4222654 | 5.39E-34 | dispersed | |
Cla05g01670 | Cla-Chr5:28375353 | Cla09g00303 | Cla-Chr9:2908885 | 3.15E-36 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00303 | K17499 | - | csv:101214132 | 684.871 |