Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00304 ATGATTATCACTGTGAAGGATTCGACTATGGTGACTCCGGCGGAGGAGACGCCGCATCGGAGCCTCTGGAATTCCAACGTCGATCTCGTGGTGCCGAGTATGCATACGCCGAGCGTCTACTTCTACCGCCCTACCGGCGCCTCTAATTTCTTCGACGCTCAGGTTCTCAAGGAAGGCCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCCGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCAACTGTAATGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACCACGGCGGTTATCGACGATTTCGGTGATTTCGCGCCTACGTTGCAGCTCCGGCAGCTTATTCCGGCAGTAGATTACTCCGGCGGAATCGAGTCGTACCCCTTGCTGGTGTTACAGGTGACACACTTCAAATGCGGTGGCGTTTCCCTCGGCGTCGGAATGCAGCACCATGTAGCGGACGGCTTCTCCGGTCTCCACTTCGTCAACACTTGGTCCGACATGTCGCGTGGCATCGACCTCAAGCTCCGGCCTTACATCGACCGGACCCTCCTCCGTGCGCGGGACCCACCTCAACCGACCTTCCGACACATCGAATATCAACCGGCCCCACCCATGAAAATCCCGGTCCAGCCCGACCCGGACGGAACCACCGTCTCCATTTTCAAATTCACCCGGGAGCAGCTTAATTTACTCAAAGCCAAATCCAAAGAAAACGGCAACACCACCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGGTGCACGTGCAAGGCTCGTGACCTTCCGGAGGATCAAGACACTAAGCTTTACATTGCCACCGACGGTCGTGCCCGGTTGCGCCCGCCGCTCCCCAACGGTTACTTTGGCAATGTCATCTTCACAACGACGCCGCTCGCCGTCGCCGGCGAACTAATGTCGAATCCGACGTGGTTCGCAGCCGGGAAGATCCACGACGCCTTGGCTCGGATGGATAACGATTATTTGAGGTCGGCTTTGGACTATCTCGAGATTCAGCCAAACATATCGGCGTTGGTCCGTGGTGCTCATACTTTCCGGTGCCCCAATTTGGGGATCACGAGCTGGGTCAGACTGCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCCGGCGGAATCGCATACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCGGACGACGGCAGCTTGTCGGTGGCGCTTTCGCTGCAGAATCGACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA 1293 56.46 MIITVKDSTMVTPAEETPHRSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDAQVLKEGLSKALVPFYPMAGRLRRDEDGRIEINCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMSRGIDLKLRPYIDRTLLRARDPPQPTFRHIEYQPAPPMKIPVQPDPDGTTVSIFKFTREQLNLLKAKSKENGNTTNYSSYEMLSGHVWRCTCKARDLPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGELMSNPTWFAAGKIHDALARMDNDYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVALSLQNRHMKVFEKLFFDI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2934078 2938136 + ClCG09G003400.1 Cla09g00304 279724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00304 430 Gene3D - 211 430 IPR023213 -
Cla09g00304 430 MobiDBLite consensus disorder prediction 196 215 - -
Cla09g00304 430 Pfam Transferase family 2 425 - -
Cla09g00304 430 Gene3D - 1 205 IPR023213 -
Cla09g00304 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 429 - -
Cla09g00304 430 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 429 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01628 Cla-Chr2:31036756 Cla09g00304 Cla-Chr9:2934078 5.17E-15 dispersed
Cla06g00775 Cla-Chr6:10480312 Cla09g00304 Cla-Chr9:2934078 3.19E-14 dispersed
Cla07g01064 Cla-Chr7:27242429 Cla09g00304 Cla-Chr9:2934078 3.75E-29 dispersed
Cla09g00304 Cla-Chr9:2934078 Cla11g00868 Cla-Chr11:13753101 5.65E-52 dispersed
Cla10g02072 Cla-Chr10:36417138 Cla09g00304 Cla-Chr9:2934078 2.12E-14 dispersed
Cla11g00451 Cla-Chr11:5124089 Cla09g00304 Cla-Chr9:2934078 4.93E-26 dispersed
Cla11g00607 Cla-Chr11:6895476 Cla09g00304 Cla-Chr9:2934078 1.66E-29 dispersed
Cla11g01427 Cla-Chr11:27814511 Cla09g00304 Cla-Chr9:2934078 6.92E-15 dispersed
Cla09g00304 Cla-Chr9:2934078 Cla05g01912 Cla-Chr5:30971888 2.39E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00304 K13065 - csv:101214857 846.269