Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00324 | ATGGGGACTCCGGTGAATATAATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGAAGGGCAAGTTACAGAAATTAATGGCAAAAATGCTACTATACTCACTACCAATGAAAAAACTATTGTTGCAGAAATTTCGAGTATATATCCGAAAGACACGGAGGCGCCGCCGGCGGGGGTTGACGACATGACGAAATTGGCGTATCTTCATGAACCGGGAGTTCTGCATAACCTAGCTTGTCGATTTTCTCTCAATGAAATATACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGCGACTGCCCCATTTGTATGACATTCACATGATGGAACAATATAAAGGAGCTCCTTTCGGCGAACTTAGTCCACATCTTTTCGCTGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATATTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGGTCAGATACTGAAGGAAGAACAGTTGAACAACAGGTTTTGGAGTCCAACCCTGTACTGGAAGCATTTGGAAATGCCAAAACCGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTCGAACGGTCACGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTCAAGAAATTCAAGTTAGGAGACCCGAGGACATTTCATTATCTTAATCAAACGAATTGTTATGAAGTGGCGAATGTTGATGATGCAAGAGAGTACTTAGAGACGAGAAATGCCATGGATGTTGTCGGAATCAGCCAGGAGGAACAGGATGCTATATTTCGTGTTGTAGCTTCAATACTGCATCTTGGAAACATCAACTTCATGAAAGGGAAGGAAGTTGACTCTTCCAAAGTGAAAGACGAGAAGTCTAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTGAAGGCACTGGAACATTCGCTCTGCCAGCGTGTCATAGTGACTCCAGATGGCAACATTACAAAGCCTTTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCCAGTTTAATTGGAGTTCTTGATATTTATGGTTTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACGAAGGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTCCTTGATCTTATTGAGAAGGTACTGCTACTGACTTTTGGCTCACTCCTTTGTAACATATTGTGCTTGCTGCCACCCACCGTACCTCGAGTAATGAATACATTTTGTGTCTCACAGAAACCTGGAGGTATAATCGCCCTGCTTGATGAAGCCTGTATGTTTCCAAAGTCAACACACGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGATCAATTTCTTGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTAAATGCCTCACGATGCTCTTTTGTTGCTAATCTTTTCCCTCCACTTCCTGAGGAGAGCTCAAAGCAATCCAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATTAGATGTGTAAAGCCCAACACAGTTTTGAAACCTGGCATCTTTGAGAACTTCAACGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCAATTAGGATAAGTTGTGCAGGATATCCAACAAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCGGATGGCTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTAAAAGGTTATCAGATTGGAAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATTTTGGCTAACGCTGTCAGACGCATCCAGCGGCAAATACGAACCCATCTAACTAGGAAAGAGTTTATCGCCCTGAGGAGAGCTACAATTCATATACAGAAACTTTGGAGAGGGAAACTTGCTCGTAAGCTGTATGAGCAAATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAAATTACTTGCATCAGCTATAGTTATTCAGACTGGTATGCGTGCAATGGCAGCTAGAAATGAGTACAGACACAGAAGAAGAACTAAGGCAGCTATCATTGTTCAGACTGAATGGCGGAGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGAAGGAGCTTAGAAAATTAAAGATGGCTGCAAGAGAAACAGGAGCACTCAAGGAGGCCAAGGACAAATTGGAGAAACGTGTCGAGGAGCTAACATGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCTAAGGGGCAAGAGGTTGCAAAATTACAAAATGCTTTGGAAGAAATGCAAGGCCAGCTGGATGAAGCCAATGCTGCAATTATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCCCCACCAGTCATTAAGGAAGTACCTGTGGTTGACGAGACCAAGCTAGAAATGCTGAGAAATCATAATGAAGAACTTGAGGGGGAGGTTGGAGAGCTGAAGAAGAAAATTGAGGAATTTGAAGAAAAGTATGCTGAAGTGGAAAGGGAGAGTAAAGCTAGGCTCAAGGAGGCAGAAGAGGCACATTTGAAATCGTTGCAACTTCAAGAGGCTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCTGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAATGAGTCCCTCTCTGAAGAAGTGCAAGCCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGTTCTCCGCAACCGGCCAGTGGCTGTTGAGCATATATCTGTTCCCGCTGGAGTGCTTACAGAAAGCAAGACTTTAGATAACGGACATGTTAAGGAAGAGGAGAATAAATCAACTAAGGAACCATCTACTGTTCCCATCCTAGTTAAACAAGGTTCGCTTACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAGCGTTTTGACAAGGGCAGACCAGTTGCAGCCTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGAGAAAACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGCGATTTTGCATATTGGCTTTCAACCACTTCCACCCTTCTCTATCTTCTTCAAAGTTCACTCAAGGCAACCAATACAAGTACTGTAGCTTCACATCGCAACCGAGCTTCACCTGCAACTTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAGTGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGCAAGACAAACAATCAGTCTAAAGTTGAAGCCAAGTACCCAGCACTTCTTTTTAAGCAACATCTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGTCCTTTCTTGCATCTATGTATTCAGGCACCAAGATCAGTGAAGTCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAACATTGTTGCAAAACAACAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGACCAAACGTTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTCCAAGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTACTACGACGTGAGTGTTGTTCCTTCAGTAATGGAGAGTACTTGAAGTTGGGTCTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACCGATACGTATGCTGGCTCTTCTTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACTCCAGAAATCCCAGAAAAGTTTGAATGAGATCACAGATGAATTGTGCCCGATTCTGAGCATTCCGCAAATATATCGCATAGGCACGATGTTCTGGGATGACAAATATGGAACTCAGGGATTATCTCCTGATATAATTGGAAAAATGAGAGTCCTATTGGCAGAAGACTCCATAAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATGGAAGAAATATTCCGGTCGTTTGGCGAGGATGGCGGGGTTAACCTTTCCGACGTTGACCCGCCACCACTTATAAGACAAAGATCGGATTTCCATTTTCTAGTGCAGCAACTGACTGAATGA | 4770 | 42.14 | MGTPVNIIVGSHVWVEDPEDAWIEGQVTEINGKNATILTTNEKTIVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAPFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKLGDPRTFHYLNQTNCYEVANVDDAREYLETRNAMDVVGISQEEQDAIFRVVASILHLGNINFMKGKEVDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKVLLLTFGSLLCNILCLLPPTVPRVMNTFCVSQKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASRCSFVANLFPPLPEESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTHLTRKEFIALRRATIHIQKLWRGKLARKLYEQMRREAASIRIQKHARAHADRKSYKKLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRSKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQNALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGEVGELKKKIEEFEEKYAEVERESKARLKEAEEAHLKSLQLQEAIERLESNLSSLESENQVLRQQALVAADNESLSEEVQALKSKIGSLEAENEVLRNRPVAVEHISVPAGVLTESKTLDNGHVKEEENKSTKEPSTVPILVKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAEKTNIFDRIIHTIRSSIESQENISDFAYWLSTTSTLLYLLQSSLKATNTSTVASHRNRASPATLFGRMAYGLRSSSVGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVKSRSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSMEEIFRSFGEDGGVNLSDVDPPPLIRQRSDFHFLVQQLTE | 1589 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3151804 | 3163459 | + | ClCG09G003590.2 | Cla09g00324 | 279744 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00324 | 1589 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 633 | - | - | |
Cla09g00324 | 1589 | Pfam | Myosin head (motor domain) | 529 | 751 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | Pfam | Myosin head (motor domain) | 64 | 498 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | Coils | Coil | 908 | 942 | - | - | |
Cla09g00324 | 1589 | CDD | MyosinXI_CBD | 1164 | 1551 | IPR037975 | GO:0007015 | |
Cla09g00324 | 1589 | ProSiteProfiles | Myosin motor domain profile. | 62 | 763 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | ProSiteProfiles | IQ motif profile. | 766 | 793 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | Pfam | Myosin N-terminal SH3-like domain | 9 | 46 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | Gene3D | - | 699 | 761 | - | - | |
Cla09g00324 | 1589 | Gene3D | Kinesin motor domain | 65 | 694 | IPR036961 | - | |
Cla09g00324 | 1589 | PANTHER | MYOSIN-12 | 19 | 1582 | - | - | |
Cla09g00324 | 1589 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 817 | 914 | IPR027417 | - | |
Cla09g00324 | 1589 | Gene3D | - | 252 | 310 | - | - | |
Cla09g00324 | 1589 | Coils | Coil | 1087 | 1114 | - | - | |
Cla09g00324 | 1589 | Coils | Coil | 1004 | 1080 | - | - | |
Cla09g00324 | 1589 | Coils | Coil | 947 | 981 | - | - | |
Cla09g00324 | 1589 | ProSiteProfiles | IQ motif profile. | 789 | 818 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | iq_5 | 788 | 810 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | iq_5 | 813 | 835 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | iq_5 | 836 | 858 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | iq_5 | 765 | 787 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | iq_5 | 884 | 906 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | iq_5 | 861 | 883 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | Gene3D | - | 439 | 655 | - | - | |
Cla09g00324 | 1589 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | ProSiteProfiles | IQ motif profile. | 837 | 866 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | MYSc_2a | 56 | 764 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla09g00324 | 1589 | PANTHER | MYOSIN | 19 | 1582 | - | - | |
Cla09g00324 | 1589 | ProSiteProfiles | IQ motif profile. | 814 | 840 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | SMART | DIL_2 | 1403 | 1510 | IPR002710 | - | |
Cla09g00324 | 1589 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 817 | IPR027417 | - | |
Cla09g00324 | 1589 | Pfam | IQ calmodulin-binding motif | 816 | 835 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | Pfam | IQ calmodulin-binding motif | 769 | 786 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | Pfam | IQ calmodulin-binding motif | 887 | 906 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | Pfam | IQ calmodulin-binding motif | 790 | 809 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | Pfam | IQ calmodulin-binding motif | 839 | 858 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | ProSiteProfiles | IQ motif profile. | 885 | 914 | IPR000048 | GO:0005515 | |
Cla09g00324 | 1589 | ProSiteProfiles | Dilute domain profile. | 1213 | 1528 | IPR002710 | - | |
Cla09g00324 | 1589 | CDD | MYSc_Myo11 | 76 | 751 | IPR036018 | - | |
Cla09g00324 | 1589 | Pfam | DIL domain | 1404 | 1507 | IPR002710 | - | |
Cla09g00324 | 1589 | Gene3D | - | 816 | 866 | - | - | |
Cla09g00324 | 1589 | Gene3D | - | 765 | 815 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01472 | Cla-Chr3:30225431 | Cla09g00324 | Cla-Chr9:3151804 | 0 | dispersed | |
Cla06g00123 | Cla-Chr6:1339129 | Cla09g00324 | Cla-Chr9:3151804 | 0 | dispersed | |
Cla08g00984 | Cla-Chr8:22519933 | Cla09g00324 | Cla-Chr9:3151804 | 0 | dispersed | |
Cla09g00324 | Cla-Chr9:3151804 | Cla09g00751 | Cla-Chr9:7447918 | 0 | dispersed | |
Cla09g00324 | Cla-Chr9:3151804 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00324 | K10357 | - | csv:101207221 | 2892.83 |