Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00383 | ATGGCTATGGCTGGGCGTATGAGATCGATCATTCCTCAATTCAATCAGCTTCTGAAATCGGAGTCACTCACTCAGAGACCTGCTCTTCTAAGAGCCCTACTTTGCCCCACGACTCCCAACTCCGAGGTCTCGAGGAACTATGCAACTGCTTCCAAGAAAAGAGAGGAAAAAGTTAAAGTTCCCCTGGTTTTGTTTGGGGGTTCTGGAAACTATGCCTCTGCTTTGTACCTTGCAGCAGTAAAAGCTAATTCCTTGGATAAGGTTGAGAGAGAGCTTCTTGACCTTGTCGAGGCTTCACAGAGAAGTGCCACCTTCTCTCAGTTCACAAGAGATCCCTCAGTGTGTAAAGATACTAGGGTCAAGGCTATTGAGGATATTTGTGCTTCAGCTAAATTTTCAGAAATTGTAAAAAACTTTTTGGTTATATTGGCTGAGTATGGAAGGCTGAAATACATAGACAGCATTGCAAAGAGGTTTGTAGAGTTGACAATGGCTCATCGAGGAGAGGTGAAAGCCATTGTGACTACAGTTATTCCCCTCCCTCCTGAAGAAGAGAAAGAATTAAAGGAGACCCTGCAGGATATTATTGGACAAGGGAAAAGGGTCAAGCTTGAACAGAAGATTGATCCAAGTATTCTCGGCGGACTAGTTGTAGAATTCGGTGAGAAAGTGTTCGACATGTCAATTAAGACCAGAGCACGACAGATGGAGAGGTTCTTGCGAGAACCTGCAAACCTCCACAGCCTCTGA | 750 | 44.67 | MAMAGRMRSIIPQFNQLLKSESLTQRPALLRALLCPTTPNSEVSRNYATASKKREEKVKVPLVLFGGSGNYASALYLAAVKANSLDKVERELLDLVEASQRSATFSQFTRDPSVCKDTRVKAIEDICASAKFSEIVKNFLVILAEYGRLKYIDSIAKRFVELTMAHRGEVKAIVTTVIPLPPEEEKELKETLQDIIGQGKRVKLEQKIDPSILGGLVVEFGEKVFDMSIKTRARQMERFLREPANLHSL | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3740733 | 3744875 | - | ClCG09G004190.1 | Cla09g00383 | 279803 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00383 | 249 | TIGRFAM | ATP_synt_delta: ATP synthase F1, delta subunit | 70 | 239 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | PANTHER | ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL | 37 | 242 | - | - | |
Cla09g00383 | 249 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 68 | 169 | IPR026015 | - | |
Cla09g00383 | 249 | Hamap | ATP synthase subunit delta [atpD]. | 63 | 242 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 202 | 221 | IPR020781 | GO:0015986|GO:0016020|GO:0046933 | |
Cla09g00383 | 249 | Gene3D | - | 67 | 160 | IPR026015 | - | |
Cla09g00383 | 249 | PRINTS | ATP synthase delta subunit signature | 67 | 86 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | PRINTS | ATP synthase delta subunit signature | 137 | 148 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | PRINTS | ATP synthase delta subunit signature | 148 | 162 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | PRINTS | ATP synthase delta subunit signature | 200 | 215 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | PRINTS | ATP synthase delta subunit signature | 215 | 233 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | Pfam | ATP synthase delta (OSCP) subunit | 69 | 238 | IPR000711 | GO:0015986|GO:0046933 | |
Cla09g00383 | 249 | PANTHER | ATP SYNTHASE DELTA CHAIN | 37 | 242 | IPR000711 | GO:0015986|GO:0046933 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla09g00383 | Cla10g01180 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00383 | Cla-Chr9:3740733 | Cla08g00262 | Cla-Chr8:5345009 | 4.98E-06 | dispersed | |
Cla10g01180 | Cla-Chr10:26412403 | Cla09g00383 | Cla-Chr9:3740733 | 2.33E-99 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00383 | K02137 | - | csv:101206351 | 392.119 |