Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00419 ATGGTTTCTGCTGTCTTATATTGCATGACTATTCCACTTATCCTCACCTTTTTCCAACAAAAAACTTCCTCCATGTTTTCCCATGCATTTCCATTCCTTCATCACAAACCTATGATGGATTCCGGCAACCTCTCCTCCTCCTCCCCCACCGCGGCCTTGCCTCCTCCAATTTCTGTTGGAAACGGGCTCCGGTTGCTCCTCGATGTCCAAATCTTGGAAATCTCTTTCGCTCTTTTTGTGTTCTTAGTCATCCATGTCATTAGACAGAAGAGACGATATGGCTTGCCTATATGGCCAATCGTTGGAATGTTACCGGCTTTGATTACGGCAGCACGTGGGAATCTCTACGACTGGATTACTGACCTCCTCCGCCATCACAAGGGCACGTTTCAATTTCGAGGCCCCTGGCTTACTAGTCTCAATTGTGTCGTCACTGCTGATCCTCGAAACTTGGAGCACCTTCTCAAGACCAAATTTTCCTCCTACCCAAAAGGGCCATTCTTTCGTGACACGGTGAGAGACCTACTCGGTGACGGAATATTCGGTGCCGACGATGAGACGTGGCAACGTCAAAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCGAGGTTCCGACAAATGACGGTGGAGTCGTTGGTGGAGCTCGTCCACTTGAGGTTAGAAGCGGTGTTGGAGGATTTCGCGGGACGGTCGGCAACGGTGGACCTGCAGGATGTTCTTCTGAGGTTAACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCTGGCTGTTTGCGCGGCGGCTTACCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCCACTGAAGTTACTGTTATACGCTTCATCACACCTACTTTCGTATGGAAAGCCATGAGGTACCTGAACTTGGGTATGGAAAAGAAACTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCAGATAATGTGATTCGAACACGGAAGAGAGAGCTCTCTACGGCGGCGCAACCGCAAGCCGATAACCAAAGATCTGACCTATTAACCGTATTCATGAAGCTAAGAGACGAGCAAGGGCGGCCGTTCTCCGACAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTTGCCGGAAGAGACACATCTTCCGTAGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATCCCCATGTGGAAGACAAAATTCTGGCAGAAATTGGCAGAATCGTCGGCGAACGAGAAGAAGCCAAAACCAGAGAGCTTCGATTCGATTTGTTAGTGTTCAAACCAGAGGAAATCAAGAAAATGGAGTATTTGCACGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTCTGAAGAAAGGAACGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGACGGTCGGTTCATGAGCGAATCGGCGTATCGGTTCACAGCCTTCAACGGCGGCCCTCGGCTGTGTCTTGGAAAGGATTTTGCGTACTATCAAATGAAATACGTCGCCGCTTCGATCATGAGCCGGTACCGGGTGGCGGTGGTGACGGGCCATTCAGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAAAACGGCCTGAAAGTCAATTTGATTAAACGAGAAGAGGGGCAGATTCGGAAATACATGAAGTTAAATTGA 1767 48.5 MVSAVLYCMTIPLILTFFQQKTSSMFSHAFPFLHHKPMMDSGNLSSSSPTAALPPPISVGNGLRLLLDVQILEISFALFVFLVIHVIRQKRRYGLPIWPIVGMLPALITAARGNLYDWITDLLRHHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGPFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHLRLEAVLEDFAGRSATVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVIRFITPTFVWKAMRYLNLGMEKKLKQSIKAVDEFADNVIRTRKRELSTAAQPQADNQRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPHVEDKILAEIGRIVGEREEAKTRELRFDLLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMRDGRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIMSRYRVAVVTGHSVEPKLALTFYMKNGLKVNLIKREEGQIRKYMKLN 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3995408 3997794 + ClCG09G004500.2 Cla09g00419 279839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00419 588 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506|GO:0016705
Cla09g00419 588 Pfam Cytochrome P450 96 561 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 Gene3D Cytochrome P450 93 586 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS P450 superfamily signature 372 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS P450 superfamily signature 515 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PANTHER CYTOCHROME P450 86B1-LIKE 59 577 - -
Cla09g00419 588 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS E-class P450 group I signature 361 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS E-class P450 group I signature 381 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS E-class P450 group I signature 436 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 SUPERFAMILY Cytochrome P450 94 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g00419 588 PANTHER CYTOCHROME P450 59 577 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00254 Cla-Chr1:2583198 Cla09g00419 Cla-Chr9:3995408 2.73E-160 dispersed
Cla01g01578 Cla-Chr1:30449523 Cla09g00419 Cla-Chr9:3995408 4.31E-122 dispersed
Cla06g00341 Cla-Chr6:4336709 Cla09g00419 Cla-Chr9:3995408 5.56E-153 dispersed
Cla09g00419 Cla-Chr9:3995408 Cla11g00884 Cla-Chr11:14972065 1.75E-125 dispersed
Cla10g01816 Cla-Chr10:34064859 Cla09g00419 Cla-Chr9:3995408 2.07E-103 dispersed
Cla10g01144 Cla-Chr10:25950852 Cla09g00419 Cla-Chr9:3995408 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00419 K15402 - csv:101212202 1060.44