Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00434 ATGGACGATAGCTGTGCTGTGTGTGCCGAGACTCTTGAATGGGTTGCCTATGGGTCTTGCGGCCATCGGGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGTGGTGATCGCCGTTGTTGCATCTGCAAGTCTGAATCCGCCGTCGTGTTCGTCTCTAAGGCCTTGGGAGATTATACAAGGACAATTAACGACTTCACAGTCTTTCCTTCTGAACCAAGAGAGGGTCGTAGTGGATCCTATTGGTATCATGAAGATACACAAGCATTTTTCGATGATGTTGATCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATTGGTGAAGATCAACCAAATGATGCCTCAAAACGCCGAGGAAGGTTTCGGAATATTGAGCAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGCAGGAAGGTTTTTATTTGTGAACAAAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACGGGTGACTCTGAGGTCGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGGCATCCTATGTGTGAATTTTGCAGAACTCCATTTTATGGAGATAATGAGCTGTATACTCATATGTCAACTGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTACGAATACTATAAGAATTATGATGACCTAGAGGCAATGAGCTTCTTTTGGCCACAGATCCATTTTCGACAAGGACATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTATAGTGTTCCAATCTGAAGCGGAAATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAATGAGCAAGATAATCGCCGTGGTAGACGCACATTTCGTCGCGATTCTTCTGAAGATCTACTTTCTTTGGCCATTCAAGAAAGTTTTGAAACAGCTAATGTTGATGACACCAATCATGACCCATTACCTAGCGGACAAGTAGCCTCAGATCAGGAAAATATAAGCAACATTGATCCCTTGATTGAACCATTTGAAGCATTGGCAACAGCAGATCCTGAATCAGCTTCTAGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGAGCAATCGTCCTTTCCTCCCCTTTCAACAGCATCTAGCAGTAGCCATCCAAAGCCCAGTCAGGACAAAGACATTCTACATAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAACGTGACTGTTCTGAATTCTGCAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGGTACCACTAAATAGCTCATCTCAAGCTTGGCCTGCAATAAACGCCAATCATGCAGCATCGAGCAGTTCTGGGCAGACTAAGGGTGTCGTAACCATTAATAATGGCCCTTCAGTCTCTGCTTACTCAAATGCTGCTCAGATGCATGCAAAGGCTCGATCTAGTTCTTCAAGTGGATCAGGTAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCTCCCAGTCTCATTGACATTGCCTATACTGAACCCTCAGTTAATGAATTCCCTCCAGTATCTGCAGCACAGGCACGGAAGGCGCCCTCAAGTAGCCAGAGTTCAATGAACATGGAAGATGTGCAGACAGCAAACAAATCTCTAGTTGAAAAGATCCGTGCTGCACTTGATTTTGATCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGACTGTGTGCAACAGTTCGGTTTGTCACATCTTCTGCTTGAGTTGGCTAGGCTCTGTCCTGATCCTCAGAAACAGAAAGAACTTGTGGAGACCTATAATGCTAGTTTTCATAAAGATGTGATCCCAGAAAATGGTAGGGCTCTAGATGGTATTCAAATTAAAGACAAAAGTAAGGGAAAGAAAGGTAAAGGGAAGTCTATGGAGGTTAAAGAGAGCAGTTCCAAGGACAAGTTAGCAGATAGTATCTTGAGCAGTGTTCGGGAATTGCAGTCGAGTTTCAGGCCATCCGAGGAAAATGTAGAGGTATTATTGAAGGGTGAGTACCGTGCTTCAAAAGGGAAACTGAAGATATCATCTGATGACCAGCAAGGTGGGATAGGAGGACAAAACAGTCAACCGTCTACCGGTCTATCGAACCAAAGCACTGGGGATGGGGGTGGTGGGGGGAGCAAACAAAAAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCAGTTGCTGCACTCTTAGATTTAAAAAACAACAATCTAGCTTTAGACCCAGAACCAGTCGAAAGAGTAGAGGACAGGAACAATGCTGCAGCAGGGGCATTGCCTGTTCGGGGCGTTTGGCGAAATGGTGCTCAAAGGCTTTTCTCCTAG 2493 44.28 MDDSCAVCAETLEWVAYGSCGHRDVCSTCVARLRFICGDRRCCICKSESAVVFVSKALGDYTRTINDFTVFPSEPREGRSGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDASKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEAMSFFWPQIHFRQGHFLCEDEACLAKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSEDLLSLAIQESFETANVDDTNHDPLPSGQVASDQENISNIDPLIEPFEALATADPESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPSQDKDILHNNSMAAHLRRQRNVTVLNSAGWPKSSRAPVVPLNSSSQAWPAINANHAASSSSGQTKGVVTINNGPSVSAYSNAAQMHAKARSSSSSGSGSSSRISHSASAPSLIDIAYTEPSVNEFPPVSAAQARKAPSSSQSSMNMEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLLLELARLCPDPQKQKELVETYNASFHKDVIPENGRALDGIQIKDKSKGKKGKGKSMEVKESSSKDKLADSILSSVRELQSSFRPSEENVEVLLKGEYRASKGKLKISSDDQQGGIGGQNSQPSTGLSNQSTGDGGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNNNLALDPEPVERVEDRNNAAAGALPVRGVWRNGAQRLFS 830
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4141914 4148000 - ClCG09G004660.1 Cla09g00434 279854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00434 830 MobiDBLite consensus disorder prediction 663 690 - -
Cla09g00434 830 MobiDBLite consensus disorder prediction 503 527 - -
Cla09g00434 830 CDD RING-HC_ZNF598 5 46 IPR041888 -
Cla09g00434 830 PANTHER ZINC FINGER PROTEIN 598 1 828 IPR044288 GO:0061630|GO:0072344
Cla09g00434 830 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Cla09g00434 830 MobiDBLite consensus disorder prediction 398 428 - -
Cla09g00434 830 PANTHER EBR1 1 828 - -
Cla09g00434 830 MobiDBLite consensus disorder prediction 736 761 - -
Cla09g00434 830 MobiDBLite consensus disorder prediction 661 690 - -
Cla09g00434 830 MobiDBLite consensus disorder prediction 728 775 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00434 K22381 - csv:101214376 1424.07