Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00566 ATGGGCTGGGCCACATCATATCCAAAAGATGACTCACAACAAACTTTGAAACGTGAAAGCGTGTTATTGGTCGTAGCTTGTGTGTGGAAGCGGCCCACAGGGCGTGGCAAGTTCTTCGTGAAGTTCTCTGTAGTATCAATGGCCGGTTCTATCAAGGTCCATGGAATTCCCACTTCCACAGCCACTGGTAGGGTTCTTGCTGCCCTTTACGAGAAGGGTCTTCAATTCGAGCTTGTGAATGTCAAATTACACGAAGGAGAACACAAGAGAGAGCCCTTCCTCTCGTTGAATCCCTTTGGTCAAGTTCCTGCGTTCCAAGATGGAGATCTGGCGCTTTTTGAATCTAGAGCGATCACGCAGTACATCTCGGGAAATTATGCTAGTAATGGAACTCAGTTGATTCCTCAAGATCCCAAGAAAGGGGCGCTCGTATTAACATGGATTGAGCCAGTTTTTGGGTTGGGTGAGGCAGATCCTGCAGTAGTTGAGCAAAGTGAAGCCGAGTTAGGCAAAGTTCTTGATATCTACGAGAAAAGGCTGTCTGAATCCAAATACTTAGGAGGTGAGTCCTTCAGTTTGGCTGATCTGCACCATCTCCCTGTTCTGGGATACTTGTTGGCCACACAGTCCAAGAAACTCTTTGAATCCCGACCCCATGTCAATGCTTGGGTGGCTGATATCATAGCCAGGCCATCTTGGGCTAAAGTTCTTGAACTTCGCAAGTAA 726 47.38 MGWATSYPKDDSQQTLKRESVLLVVACVWKRPTGRGKFFVKFSVVSMAGSIKVHGIPTSTATGRVLAALYEKGLQFELVNVKLHEGEHKREPFLSLNPFGQVPAFQDGDLALFESRAITQYISGNYASNGTQLIPQDPKKGALVLTWIEPVFGLGEADPAVVEQSEAELGKVLDIYEKRLSESKYLGGESFSLADLHHLPVLGYLLATQSKKLFESRPHVNAWVADIIARPSWAKVLELRK 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5214315 5217469 - ClCG09G006110.2 Cla09g00566 279986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00566 241 Pfam Glutathione S-transferase, N-terminal domain 51 123 IPR004045 -
Cla09g00566 241 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 49 130 IPR004045 -
Cla09g00566 241 SFLD Main (cytGST) 51 230 - -
Cla09g00566 241 Pfam Glutathione S-transferase, C-terminal domain 156 231 IPR004046 -
Cla09g00566 241 SUPERFAMILY Thioredoxin-like 50 135 IPR036249 -
Cla09g00566 241 CDD GST_N_Phi 51 123 - -
Cla09g00566 241 SUPERFAMILY GST C-terminal domain-like 121 240 IPR036282 -
Cla09g00566 241 SFLD Glutathione Transferase (cytosolic) 51 230 IPR040079 -
Cla09g00566 241 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 35 241 - -
Cla09g00566 241 PANTHER GLUTATHIONE S-TRANSFERASE RHO 35 241 - -
Cla09g00566 241 Gene3D Glutaredoxin 49 134 - -
Cla09g00566 241 Gene3D - 136 241 - -
Cla09g00566 241 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 112 241 IPR010987 -
Cla09g00566 241 CDD GST_C_Phi 148 237 IPR034347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00566 Cla-Chr9:5214315 Cla09g00568 Cla-Chr9:5226530 1.53E-50 dispersed
Cla09g00566 Cla-Chr9:5214315 Cla09g00567 Cla-Chr9:5224630 1.18E-94 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00566 K00799 - csv:101212291 358.221