Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00566 | ATGGGCTGGGCCACATCATATCCAAAAGATGACTCACAACAAACTTTGAAACGTGAAAGCGTGTTATTGGTCGTAGCTTGTGTGTGGAAGCGGCCCACAGGGCGTGGCAAGTTCTTCGTGAAGTTCTCTGTAGTATCAATGGCCGGTTCTATCAAGGTCCATGGAATTCCCACTTCCACAGCCACTGGTAGGGTTCTTGCTGCCCTTTACGAGAAGGGTCTTCAATTCGAGCTTGTGAATGTCAAATTACACGAAGGAGAACACAAGAGAGAGCCCTTCCTCTCGTTGAATCCCTTTGGTCAAGTTCCTGCGTTCCAAGATGGAGATCTGGCGCTTTTTGAATCTAGAGCGATCACGCAGTACATCTCGGGAAATTATGCTAGTAATGGAACTCAGTTGATTCCTCAAGATCCCAAGAAAGGGGCGCTCGTATTAACATGGATTGAGCCAGTTTTTGGGTTGGGTGAGGCAGATCCTGCAGTAGTTGAGCAAAGTGAAGCCGAGTTAGGCAAAGTTCTTGATATCTACGAGAAAAGGCTGTCTGAATCCAAATACTTAGGAGGTGAGTCCTTCAGTTTGGCTGATCTGCACCATCTCCCTGTTCTGGGATACTTGTTGGCCACACAGTCCAAGAAACTCTTTGAATCCCGACCCCATGTCAATGCTTGGGTGGCTGATATCATAGCCAGGCCATCTTGGGCTAAAGTTCTTGAACTTCGCAAGTAA | 726 | 47.38 | MGWATSYPKDDSQQTLKRESVLLVVACVWKRPTGRGKFFVKFSVVSMAGSIKVHGIPTSTATGRVLAALYEKGLQFELVNVKLHEGEHKREPFLSLNPFGQVPAFQDGDLALFESRAITQYISGNYASNGTQLIPQDPKKGALVLTWIEPVFGLGEADPAVVEQSEAELGKVLDIYEKRLSESKYLGGESFSLADLHHLPVLGYLLATQSKKLFESRPHVNAWVADIIARPSWAKVLELRK | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5214315 | 5217469 | - | ClCG09G006110.2 | Cla09g00566 | 279986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00566 | 241 | Pfam | Glutathione S-transferase, N-terminal domain | 51 | 123 | IPR004045 | - | |
Cla09g00566 | 241 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 49 | 130 | IPR004045 | - | |
Cla09g00566 | 241 | SFLD | Main (cytGST) | 51 | 230 | - | - | |
Cla09g00566 | 241 | Pfam | Glutathione S-transferase, C-terminal domain | 156 | 231 | IPR004046 | - | |
Cla09g00566 | 241 | SUPERFAMILY | Thioredoxin-like | 50 | 135 | IPR036249 | - | |
Cla09g00566 | 241 | CDD | GST_N_Phi | 51 | 123 | - | - | |
Cla09g00566 | 241 | SUPERFAMILY | GST C-terminal domain-like | 121 | 240 | IPR036282 | - | |
Cla09g00566 | 241 | SFLD | Glutathione Transferase (cytosolic) | 51 | 230 | IPR040079 | - | |
Cla09g00566 | 241 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 35 | 241 | - | - | |
Cla09g00566 | 241 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 35 | 241 | - | - | |
Cla09g00566 | 241 | Gene3D | Glutaredoxin | 49 | 134 | - | - | |
Cla09g00566 | 241 | Gene3D | - | 136 | 241 | - | - | |
Cla09g00566 | 241 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 112 | 241 | IPR010987 | - | |
Cla09g00566 | 241 | CDD | GST_C_Phi | 148 | 237 | IPR034347 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00566 | Cla-Chr9:5214315 | Cla09g00568 | Cla-Chr9:5226530 | 1.53E-50 | dispersed | |
Cla09g00566 | Cla-Chr9:5214315 | Cla09g00567 | Cla-Chr9:5224630 | 1.18E-94 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00566 | K00799 | - | csv:101212291 | 358.221 |