Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00568 ATGGCGGTGAAGGTGTACGGATTGGCAATCTCAACATGCACATCTACCGTCATTATTTGCCTTAATGAAAAGCAACTTGATTTCCAACTTCTCCATGTTGACCTTTTCAATGGTGAACACAAGCAACCTCCATTTTTGGCCATCAATCCCTTTGGCCAGATTCCAGCCCTAGAAGATGGTGATCTCACCTTATTTGAATCAAGAGCAATCACATCCTACATTGCAAACAAGCACAAGGAAACAGGGCCAGATCTCCTATTGCATCACCAAAGCACCAAAGAAGGAGCCATTGTGAAGCAATGGATAGAGGTAGAGTCTCACCATTACAACCCTGCAATAACTCCCATCATCCATGAGTTCTTCACTGCTCACCTTCGAGGCCAGGAGCCCGACCAGCGCCTCATCGACCAGAACTTGGAGCGCCTACGCGCCGTTCTGGACGTGTATGAGCAGCGCCTAGGGTCCACCAAGTACCTGGGCGGGCCGTGGTACACCTTGGCCGATCTCCACCACCTCCCTTGCACGTTCTACTTCATGAAGACGCCATGGGCCTCAATGGTTAAGGATCGGCCGAATGTGAAGGCTTGGTGGGATGATATTTCATCCCGCCCCGCTTTCCTTAAGTTCAACCAAATGTATGAGAAGAACCTTCAACGAATTCCTCTTCTCCACCCAAATCCATCTCAATTTCTTCGAATAATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACTGCCACAGCCAGAGTTTTCGCTTGTCTTTATGAGAAAGATCTCGATTACGAGTTTGTTCTTCTGGATATGAAAAATAACGAGCACAAGAAACACCCCTTTCTCTCCATTAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGAATCTCACCATTTTCGAATCAAGGGCCATTACTCAATACTTGGCCAACGCCTACGCCAGCAAGGGAACCCAATTGATCTCCAACGACCCGAAGAAAGCGGCGATCATATCAACGTGGATTGAAGTGGAGGGCCACCATTACGACCCACCGGCGGTTGCTCTGTCGTTTGAGCATCTAGTCAAGCCGCTGTTTGGACTCGGTGAAACTGATCCCGCAGCGGTAGCGGAGAACGAAGCCAAGCTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAGAAACAAGTTCTTGGCTGGGGATGAGTTCAGTTTGGCGGATCTGCATCATATACCCAATGTGAGCTACTTGTTCATGACGCCGTCGAAGAAGCTGTTCGAGTCACGGCCACGTGTCAACGCTTGGGTGGCCGAGATCACTGCAAGGCCTTCGTGGGCTAAAGTTGTTGCCTTGCGCAACCAGAGTTAA 1350 49.48 MAVKVYGLAISTCTSTVIICLNEKQLDFQLLHVDLFNGEHKQPPFLAINPFGQIPALEDGDLTLFESRAITSYIANKHKETGPDLLLHHQSTKEGAIVKQWIEVESHHYNPAITPIIHEFFTAHLRGQEPDQRLIDQNLERLRAVLDVYEQRLGSTKYLGGPWYTLADLHHLPCTFYFMKTPWASMVKDRPNVKAWWDDISSRPAFLKFNQMYEKNLQRIPLLHPNPSQFLRIMASIKVHGSPISTATARVFACLYEKDLDYEFVLLDMKNNEHKKHPFLSINPFGQVPGFQDGNLTIFESRAITQYLANAYASKGTQLISNDPKKAAIISTWIEVEGHHYDPPAVALSFEHLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSRNKFLAGDEFSLADLHHIPNVSYLFMTPSKKLFESRPRVNAWVAEITARPSWAKVVALRNQS 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5226530 5232365 - ClCG09G006130.2 Cla09g00568 279988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00568 449 CDD GST_C_Phi 325 443 IPR034347 -
Cla09g00568 449 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 235 316 IPR004045 -
Cla09g00568 449 PANTHER GLUTATHIONE S-TRANSFERASE F13 227 443 - -
Cla09g00568 449 PANTHER GLUTATHIONE S-TRANSFERASE F13 2 211 - -
Cla09g00568 449 Gene3D Glutaredoxin 1 86 - -
Cla09g00568 449 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cla09g00568 449 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Cla09g00568 449 Gene3D Glutaredoxin 234 320 - -
Cla09g00568 449 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 323 449 IPR010987 -
Cla09g00568 449 SUPERFAMILY GST C-terminal domain-like 73 215 IPR036282 -
Cla09g00568 449 SUPERFAMILY Thioredoxin-like 234 315 IPR036249 -
Cla09g00568 449 PANTHER GLUTATHIONE S-TRANSFERASE RHO 227 443 - -
Cla09g00568 449 CDD GST_C_Phi 93 208 IPR034347 -
Cla09g00568 449 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Cla09g00568 449 Pfam Glutathione S-transferase, C-terminal domain 357 437 IPR004046 -
Cla09g00568 449 Pfam Glutathione S-transferase, C-terminal domain 116 204 IPR004046 -
Cla09g00568 449 CDD GST_N_Phi 237 309 - -
Cla09g00568 449 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 211 - -
Cla09g00568 449 Gene3D - 323 447 - -
Cla09g00568 449 SFLD Main (cytGST) 1 212 - -
Cla09g00568 449 CDD GST_N_Phi 2 77 - -
Cla09g00568 449 Pfam Glutathione S-transferase, N-terminal domain 243 310 IPR004045 -
Cla09g00568 449 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Cla09g00568 449 SUPERFAMILY GST C-terminal domain-like 307 445 IPR036282 -
Cla09g00568 449 Gene3D - 88 209 - -
Cla09g00568 449 SFLD Main.5: Phi-like 1 212 - -
Cla09g00568 449 SFLD Main.5: Phi-like 234 445 - -
Cla09g00568 449 SFLD Glutathione Transferase (cytosolic) 234 445 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00766 Cla-Chr7:21445627 Cla09g00568 Cla-Chr9:5226530 6.48E-06 dispersed
Cla08g01393 Cla-Chr8:26798196 Cla09g00568 Cla-Chr9:5226530 6.15E-28 dispersed
Cla09g00566 Cla-Chr9:5214315 Cla09g00568 Cla-Chr9:5226530 1.53E-50 dispersed
Cla09g00568 Cla-Chr9:5226530 Cla05g00387 Cla-Chr5:3515056 1.15E-06 dispersed
Cla09g00567 Cla-Chr9:5224630 Cla09g00568 Cla-Chr9:5226530 2.14E-53 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00568 K00799 - csv:101212771 409.453