Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00570 | ATGAGGAGAAAATCCAAAACCCTAAGAACGACGATGACGACGAGGAGGAAGAAGATGAAAGGGACATTGACGAGGCACTTGCAGGTTCAGTTAGGGCAAGTTTCACTCGCTCCTCTCCACCTCCACCGCTCCTCTTCCGCCGCCGCTGCTTGCTTCCAGGACTTGCCTGAATCTGAAGCACCGCCGACGGTCAACGTTTCTGACGCTCTCCCCTCCTCCTCTCCTAACTTTGAGGACAGAGATTTCATTCTTAGCCAGGACTTCTTCTGCACCCCTGACTATATCACCCCGGACAATCAAAATTTGTTGAATGGTGTGGATAACAATGAGGAATGCATTCCTTGCCCAAAATCTCCAGAGAAGATTAATACTGTGAAAACTAAGAGAAAAATACATGAAAGTGTTTTAGTACATCCTCTGAGTCCGAGTTTGTCTGGCTGCGAACAAGTTGTGGAGCTTGGAAACGACATGTTTGGATCAGATGATGTGGATATGGAGAAAGAGACAATGGCCATGCCAAAGAAAGGAAACTATGTTTCTCAATCTGCAGTTGCTCTACGCTGTCGAGTTATGCCTCCTCCTTGCATGAAGAACCCATACCTGAAAGATGCTTCAGATGTAGGCATAGACCCATTTGGTAATCAACGAACAAAATGTGCAGGTACAGTGCAATTAGTTCTCAAAGACATCGAAAGTTTTTTTCCTGCTCTGTTTAGTGGAGATGGTCTTTCAAGATATCACACTGATTTTCATGAGATAAAGCAAATAGGGACTGGAAATTTTAGCCGTGTCTTCAAGGTATTAAAGAGAATTGATGGTTGCTTATATGCTGTCAAACAAAGCACAAGACCGTTGAATCAAGAAATAGAAAGGAGGAGAGCTTTGATGGAAGTTCAAGCTTTGGCAGCTTTAGGATCTCATGAAAACATTGTTGGATACTACTCTTCATGGTTTGAAAATGAACAACTCTATATTCAAATGGAGCTCTGTGATTGTAGTTTATCAATTGGCAGGTATTCCCACCCATTCTCTGAGGTAGATGCGCTGAGAGCCTTGTATCAGATTGCAAAGGCATTGCTATTTGTGCACGAGAAAGGAGTAGCACATTTAGATGTGAAACCTGACAATATTTATGTCAAAGATGGTGTCTATAAACTTGGTGATTTTGGGTGTGTTACGCTTCTTGATAAGAGCCTACCGATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAAATTCTGAATGAAAGATATGATTATCTTGACAAAGTTGATATTTTCTCCTTGGGAGCTGCTATTTATGAAATTGCCCGAGGATCCACATTACCAGAAACGCATTTTATGAACCTTAAGGAGGGAAAATTGCCACTCCTTCCTGGTCATTCATTGCAATTTCAAAACTTAATCAAGGCTATGGTGGATCCTGACCCGACACGGCGTCCTTCGGCAAGGGAAGTTCTTGAGAATCCAATATTTGATAAGGTCAGAAATCATAAACAATCATAG | 1506 | 42.43 | MRRKSKTLRTTMTTRRKKMKGTLTRHLQVQLGQVSLAPLHLHRSSSAAAACFQDLPESEAPPTVNVSDALPSSSPNFEDRDFILSQDFFCTPDYITPDNQNLLNGVDNNEECIPCPKSPEKINTVKTKRKIHESVLVHPLSPSLSGCEQVVELGNDMFGSDDVDMEKETMAMPKKGNYVSQSAVALRCRVMPPPCMKNPYLKDASDVGIDPFGNQRTKCAGTVQLVLKDIESFFPALFSGDGLSRYHTDFHEIKQIGTGNFSRVFKVLKRIDGCLYAVKQSTRPLNQEIERRRALMEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDCSLSIGRYSHPFSEVDALRALYQIAKALLFVHEKGVAHLDVKPDNIYVKDGVYKLGDFGCVTLLDKSLPIEEGDARYMPQEILNERYDYLDKVDIFSLGAAIYEIARGSTLPETHFMNLKEGKLPLLPGHSLQFQNLIKAMVDPDPTRRPSAREVLENPIFDKVRNHKQS | 501 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5244434 | 5249202 | + | ClCG09G006150.2 | Cla09g00570 | 279990 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00570 | 501 | SUPERFAMILY | Protein kinase-like (PK-like) | 243 | 496 | IPR011009 | - | |
Cla09g00570 | 501 | ProSiteProfiles | Protein kinase domain profile. | 250 | 492 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00570 | 501 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED | 19 | 408 | - | - | |
Cla09g00570 | 501 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED | 421 | 497 | - | - | |
Cla09g00570 | 501 | Gene3D | Phosphorylase Kinase; domain 1 | 240 | 329 | - | - | |
Cla09g00570 | 501 | PANTHER | BNAA08G27310D PROTEIN | 19 | 408 | - | - | |
Cla09g00570 | 501 | PANTHER | BNAA08G27310D PROTEIN | 421 | 497 | - | - | |
Cla09g00570 | 501 | ProSitePatterns | Protein kinases ATP-binding region signature. | 256 | 279 | IPR017441 | GO:0005524 | |
Cla09g00570 | 501 | Pfam | Protein kinase domain | 250 | 492 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00570 | 501 | SMART | serkin_6 | 250 | 492 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g00570 | 501 | Gene3D | Transferase(Phosphotransferase) domain 1 | 330 | 497 | - | - | |
Cla09g00570 | 501 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 367 | 379 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00570 | Cla-Chr9:5244434 | Cla05g00447 | Cla-Chr5:3987535 | 1.82E-23 | dispersed | |
Cla09g00570 | Cla-Chr9:5244434 | Cla01g01633 | Cla-Chr1:31130439 | 8.29E-19 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80793 | PF00069 | Pkinase | 5.80E-47 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00570 | K06632 | - | csv:101213255 | 882.863 |