Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00571 ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCAAAATGCTGTCACGGCCGAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGGCCGTGGGCACCGCGCCGCCGCGGGGTGGTTGGTGACTCTGCAACTGGCGTTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCAAAGCACTTTTCCGGCAGGGATAAAACATAAGGACGACGTTTTGGGAGTTCTATCGTTGATTTATTATACGCTCACTTTGATTCCTCTCTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCTCTACTTTGCCGATATGCAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTAGACATTCCCAACAACCGTGTGCGGCGGGCGTCGTGGTTGAAGTCTCAACTCGAGAACCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCTGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTAGACCTTCAATAACACAGGATACAATAGTGGGGATATCAGCTGGTATATTGGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGATACACATTTGCTCCAATTATATGCATTTGGTTCAGTTTCATAGCTGCCATTGGTTTCTACAATTTTGTCAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTCACTATTTTATAAGGAACAAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAAATCAATTCAAATAAGCATGTGTGCTGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCACACACACATTAATGAAGTTGGAGACACCTTCTTCAAATCCATTCCAGGCATAGCTGTTGTGTTTGTGATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGGTCAGTGGAACTTCTTTATTTGAGTTCAGTTCTTTACAAGTTTGATCAAGGAGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTATACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTGACAACAAGATCTCTTCTCATCAACTCAAGGACATTGTATCAAATGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCTGAGCTTGTACAAGGCATTCCTCCCATTTTCAAGCTTTACATGGCCAACGTCCCCGTCCTTCATCGAGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCTATTAGCAAGGTCCCATTAGACGAGCGGTTTCTCTTTTGCAGAGTTGAGCCGAGAGAGCTTAATATCTTTCGATGCGTCGTGCGATACGGGTACACAGATGATCGAAACGAGCGAGAGTTGTTCGAGAGGAGTTTGGTGGAGAGATTGAAAGGGTTCTTAAGGGATGATGTTAGGGTTAATACCAAAGTGGAGGAGGAGAAAGATCATGAGAATGGGATAATAATTGAGGAAGAGAAACACAAGATTAGAGAAGTGGAATTGGAGGATGACATTGAGGAAGTTGATAAAGCTTGGGAAAATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAGTTGTTGCTAAGGAAGGATCTAATATTTGGAAGAGGGTTTTGATTGATTATGCTTACAATTTCTTGAAGAACAATTTGAGACAAAGTGAGAGAGTCTTTGATATTCCTCACAAACTCGATCGGACGGCCGAAAACGATCACTTTCCCGATTTCCAAGAAAGCTCCGACCACTCAACCCCCGACTTGCCGGAAAGGAAGCTCCGACGAAACGATTCATTGGACGTAGAATCCCGCACCGTCTCCGGCGCCGGCGCCCATGGCCACAAGGCGGCGGCGACGGCGAGCTGGGGAGTGATTTTACATCTGGCGTTTCAGAGCGTGGGAATTGTGTACGGCGATATCGGAACGTCGCCGTTGTATGTGTATGCAAGCACATTCACGGACGGAATCAAGCATAACGACGACGTTTTGGGTGTCCTATCTTTGATTCTCTACACTCTCACTTTGATCCCTTTGCTTAAGTATGTCTTCTTCGTCTTGCAAGCCAATGACAACGGCGAAGGTGGAACATTTGCTTTATACTCATTACTATGCCGATACGCAAAAATTGGGCTAATACCAAGCCAGCAAGTGGAAGATCAAGAGGTATCAAATTTTCAGGTGGACCTTCCCTCCGGCCGCCTTAAAATGGCGTCTTGCCTTAAATCCAAACTTGAAAACTCCACTGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCTGTTTTGTCGGCCGTCGGAGGAATCAAGAATGCAACCTCGACCATGACACAAGATAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGCTTATTCATGGTACAAAGATTTGGAACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTGCACTTATTGGTGGAATTGGCTTCTACAATTTTTTGAAATTTGACCCTGCTGTCATCAAAGCTGTTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGACGCTTGGATCTCTCTCGGCGGTGTCGTTCTTGCCATTACTGGGACAGAAGCTCTCTTTGCGGACGTGGGGCACTTCACTGTGATGTCTATAAGACTAAGCATGTGTTGTGTGGCCTACCCCGCCCTAGTCTCCGCCTATGTCGGCCAAGCTGCCTTCCTTCGTAAGCATACCGATCTCGTCTCGGACACCTTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGACGTTCGTGGTGGCCGTGCTTGCGTCCATCGTGGCCAGCCAAGCCATGATCTCTGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGTTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCCAAGTATGAGGGCCAAGTTTACATACCTGAAGTTAACTATCTTCTTATGTTGGCTTGTCTTGGAGTCACTCTAGGGTTTAAAGATACAACACGAATAGGGAACGCTTATGGCATTGCAGTGGTGTTTGTAATGGCACTCACTTCAAGTTTCCTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTATCATAATTTCCTATGTTCTCACCATTGGCTTATTAGAACTTTTCTATCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGTGGCTATCTTCCTTTAGCTTTTGCTGGATTTTTAATGACAATAATGTACATTTGGAATGATGTTCATAGAAGAAAATACTACTATGAACTTGAACACAAGATTTCTCCTCAAAAGCTCAAGGACATTGCTTCTCTCACAACTCTCAATCGTGCCCCTGGCCTTGCCTTGTTCTACTCTGAGCTTGTCCAAGGCATTCCTCCAATCTTCAAGCATTATCTATCCAACATTCCCACTCTCCAAAGGGTCCTTGTCTTCGTATCGTTCAAGTCCCTCCCGATAAGTAAAGTCCCGATGGAAGAGCGGTTTCTATTTCGACGAGTTGAACCCGATGACCTTAACGTGTTTCGATGCGTGGTAAGATATGGTTATAGAGATATCATCCACGAGCAAGAGTCGTTCGAGAGAGTGCTGGTGGAGAGGTTGAAAATGTTTATAGAGGAGGAGTCGTGGAAGCTGCAAAATGACAACGACGATAATAGAAGGAGGAGAACAGGAGAGGAGATAGAGGTGGTTGATAGGGCTTGGAGAGATGGAATTGTTCACTTGATTGGACAAAACGAGGTTGTGGCAAGTAAAGGGTCAAGGTTAGCAAAAAGGGTTTTGATCAATTATGCTTATAATGCATTGAGGAGAAATTTGAGACAAAGTGAAGAGGTCTTTTACATTCCAAGAAAACGAATGCTCAAA 4191 44.31 MAGEVEIDDLNNSPKMLSRPKLRRFDSLDIESNKLDGGRGHRAAAGWLVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKDDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQVEDREVSNYRLDIPNNRVRRASWLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRARPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFSFIAAIGFYNFVKFDPSVIKALNPKYIIHYFIRNKTQAWISLGGIVLSITGTEALFADVGHFSVKSIQISMCAVTYPALLLAYTGQASYLHTHINEVGDTFFKSIPGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELDNKISSHQLKDIVSNANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHRVLVFVSIKSLPISKVPLDERFLFCRVEPRELNIFRCVVRYGYTDDRNERELFERSLVERLKGFLRDDVRVNTKVEEEKDHENGIIIEEEKHKIREVELEDDIEEVDKAWENGVVHLVGESEVVAKEGSNIWKRVLIDYAYNFLKNNLRQSERVFDIPHKLDRTAENDHFPDFQESSDHSTPDLPERKLRRNDSLDVESRTVSGAGAHGHKAAATASWGVILHLAFQSVGIVYGDIGTSPLYVYASTFTDGIKHNDDVLGVLSLILYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSQQVEDQEVSNFQVDLPSGRLKMASCLKSKLENSTAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPAVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQAAFLRKHTDLVSDTFFSSIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILIIISYVLTIGLLELFYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKDIASLTTLNRAPGLALFYSELVQGIPPIFKHYLSNIPTLQRVLVFVSFKSLPISKVPMEERFLFRRVEPDDLNVFRCVVRYGYRDIIHEQESFERVLVERLKMFIEEESWKLQNDNDDNRRRRTGEEIEVVDRAWRDGIVHLIGQNEVVASKGSRLAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLK 1397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5257188 5284637 + ClCG09G006160.1 Cla09g00571 279991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00571 1397 MobiDBLite consensus disorder prediction 663 693 - -
Cla09g00571 1397 PANTHER POTASSIUM TRANSPORTER 681 1397 - -
Cla09g00571 1397 PANTHER POTASSIUM TRANSPORTER 362 656 - -
Cla09g00571 1397 PANTHER POTASSIUM TRANSPORTER 17 362 - -
Cla09g00571 1397 MobiDBLite consensus disorder prediction 663 699 - -
Cla09g00571 1397 TIGRFAM kup: potassium uptake protein 720 1396 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla09g00571 1397 Pfam K+ potassium transporter 721 1293 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla09g00571 1397 Pfam K+ potassium transporter 54 362 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla09g00571 1397 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 681 1397 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla09g00571 1397 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 362 656 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla09g00571 1397 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 362 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00571 Cla-Chr9:5257188 Cla10g01019 Cla-Chr10:23590456 7.67E-109 dispersed
Cla09g00571 Cla-Chr9:5257188 Cla05g02527 Cla-Chr5:36651067 3.68E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00571 K03549 - csv:101213493 1353.58