Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00571 | ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCAAAATGCTGTCACGGCCGAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGGCCGTGGGCACCGCGCCGCCGCGGGGTGGTTGGTGACTCTGCAACTGGCGTTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCAAAGCACTTTTCCGGCAGGGATAAAACATAAGGACGACGTTTTGGGAGTTCTATCGTTGATTTATTATACGCTCACTTTGATTCCTCTCTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCTCTACTTTGCCGATATGCAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTAGACATTCCCAACAACCGTGTGCGGCGGGCGTCGTGGTTGAAGTCTCAACTCGAGAACCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCTGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTAGACCTTCAATAACACAGGATACAATAGTGGGGATATCAGCTGGTATATTGGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGATACACATTTGCTCCAATTATATGCATTTGGTTCAGTTTCATAGCTGCCATTGGTTTCTACAATTTTGTCAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTCACTATTTTATAAGGAACAAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAAATCAATTCAAATAAGCATGTGTGCTGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCACACACACATTAATGAAGTTGGAGACACCTTCTTCAAATCCATTCCAGGCATAGCTGTTGTGTTTGTGATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGGTCAGTGGAACTTCTTTATTTGAGTTCAGTTCTTTACAAGTTTGATCAAGGAGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTATACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTGACAACAAGATCTCTTCTCATCAACTCAAGGACATTGTATCAAATGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCTGAGCTTGTACAAGGCATTCCTCCCATTTTCAAGCTTTACATGGCCAACGTCCCCGTCCTTCATCGAGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCTATTAGCAAGGTCCCATTAGACGAGCGGTTTCTCTTTTGCAGAGTTGAGCCGAGAGAGCTTAATATCTTTCGATGCGTCGTGCGATACGGGTACACAGATGATCGAAACGAGCGAGAGTTGTTCGAGAGGAGTTTGGTGGAGAGATTGAAAGGGTTCTTAAGGGATGATGTTAGGGTTAATACCAAAGTGGAGGAGGAGAAAGATCATGAGAATGGGATAATAATTGAGGAAGAGAAACACAAGATTAGAGAAGTGGAATTGGAGGATGACATTGAGGAAGTTGATAAAGCTTGGGAAAATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAGTTGTTGCTAAGGAAGGATCTAATATTTGGAAGAGGGTTTTGATTGATTATGCTTACAATTTCTTGAAGAACAATTTGAGACAAAGTGAGAGAGTCTTTGATATTCCTCACAAACTCGATCGGACGGCCGAAAACGATCACTTTCCCGATTTCCAAGAAAGCTCCGACCACTCAACCCCCGACTTGCCGGAAAGGAAGCTCCGACGAAACGATTCATTGGACGTAGAATCCCGCACCGTCTCCGGCGCCGGCGCCCATGGCCACAAGGCGGCGGCGACGGCGAGCTGGGGAGTGATTTTACATCTGGCGTTTCAGAGCGTGGGAATTGTGTACGGCGATATCGGAACGTCGCCGTTGTATGTGTATGCAAGCACATTCACGGACGGAATCAAGCATAACGACGACGTTTTGGGTGTCCTATCTTTGATTCTCTACACTCTCACTTTGATCCCTTTGCTTAAGTATGTCTTCTTCGTCTTGCAAGCCAATGACAACGGCGAAGGTGGAACATTTGCTTTATACTCATTACTATGCCGATACGCAAAAATTGGGCTAATACCAAGCCAGCAAGTGGAAGATCAAGAGGTATCAAATTTTCAGGTGGACCTTCCCTCCGGCCGCCTTAAAATGGCGTCTTGCCTTAAATCCAAACTTGAAAACTCCACTGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCTGTTTTGTCGGCCGTCGGAGGAATCAAGAATGCAACCTCGACCATGACACAAGATAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGCTTATTCATGGTACAAAGATTTGGAACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTGCACTTATTGGTGGAATTGGCTTCTACAATTTTTTGAAATTTGACCCTGCTGTCATCAAAGCTGTTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGACGCTTGGATCTCTCTCGGCGGTGTCGTTCTTGCCATTACTGGGACAGAAGCTCTCTTTGCGGACGTGGGGCACTTCACTGTGATGTCTATAAGACTAAGCATGTGTTGTGTGGCCTACCCCGCCCTAGTCTCCGCCTATGTCGGCCAAGCTGCCTTCCTTCGTAAGCATACCGATCTCGTCTCGGACACCTTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGACGTTCGTGGTGGCCGTGCTTGCGTCCATCGTGGCCAGCCAAGCCATGATCTCTGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGTTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCCAAGTATGAGGGCCAAGTTTACATACCTGAAGTTAACTATCTTCTTATGTTGGCTTGTCTTGGAGTCACTCTAGGGTTTAAAGATACAACACGAATAGGGAACGCTTATGGCATTGCAGTGGTGTTTGTAATGGCACTCACTTCAAGTTTCCTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTATCATAATTTCCTATGTTCTCACCATTGGCTTATTAGAACTTTTCTATCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGTGGCTATCTTCCTTTAGCTTTTGCTGGATTTTTAATGACAATAATGTACATTTGGAATGATGTTCATAGAAGAAAATACTACTATGAACTTGAACACAAGATTTCTCCTCAAAAGCTCAAGGACATTGCTTCTCTCACAACTCTCAATCGTGCCCCTGGCCTTGCCTTGTTCTACTCTGAGCTTGTCCAAGGCATTCCTCCAATCTTCAAGCATTATCTATCCAACATTCCCACTCTCCAAAGGGTCCTTGTCTTCGTATCGTTCAAGTCCCTCCCGATAAGTAAAGTCCCGATGGAAGAGCGGTTTCTATTTCGACGAGTTGAACCCGATGACCTTAACGTGTTTCGATGCGTGGTAAGATATGGTTATAGAGATATCATCCACGAGCAAGAGTCGTTCGAGAGAGTGCTGGTGGAGAGGTTGAAAATGTTTATAGAGGAGGAGTCGTGGAAGCTGCAAAATGACAACGACGATAATAGAAGGAGGAGAACAGGAGAGGAGATAGAGGTGGTTGATAGGGCTTGGAGAGATGGAATTGTTCACTTGATTGGACAAAACGAGGTTGTGGCAAGTAAAGGGTCAAGGTTAGCAAAAAGGGTTTTGATCAATTATGCTTATAATGCATTGAGGAGAAATTTGAGACAAAGTGAAGAGGTCTTTTACATTCCAAGAAAACGAATGCTCAAA | 4191 | 44.31 | MAGEVEIDDLNNSPKMLSRPKLRRFDSLDIESNKLDGGRGHRAAAGWLVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKDDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQVEDREVSNYRLDIPNNRVRRASWLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRARPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFSFIAAIGFYNFVKFDPSVIKALNPKYIIHYFIRNKTQAWISLGGIVLSITGTEALFADVGHFSVKSIQISMCAVTYPALLLAYTGQASYLHTHINEVGDTFFKSIPGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELDNKISSHQLKDIVSNANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHRVLVFVSIKSLPISKVPLDERFLFCRVEPRELNIFRCVVRYGYTDDRNERELFERSLVERLKGFLRDDVRVNTKVEEEKDHENGIIIEEEKHKIREVELEDDIEEVDKAWENGVVHLVGESEVVAKEGSNIWKRVLIDYAYNFLKNNLRQSERVFDIPHKLDRTAENDHFPDFQESSDHSTPDLPERKLRRNDSLDVESRTVSGAGAHGHKAAATASWGVILHLAFQSVGIVYGDIGTSPLYVYASTFTDGIKHNDDVLGVLSLILYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSQQVEDQEVSNFQVDLPSGRLKMASCLKSKLENSTAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPAVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQAAFLRKHTDLVSDTFFSSIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILIIISYVLTIGLLELFYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKDIASLTTLNRAPGLALFYSELVQGIPPIFKHYLSNIPTLQRVLVFVSFKSLPISKVPMEERFLFRRVEPDDLNVFRCVVRYGYRDIIHEQESFERVLVERLKMFIEEESWKLQNDNDDNRRRRTGEEIEVVDRAWRDGIVHLIGQNEVVASKGSRLAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLK | 1397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5257188 | 5284637 | + | ClCG09G006160.1 | Cla09g00571 | 279991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00571 | 1397 | MobiDBLite | consensus disorder prediction | 663 | 693 | - | - | |
Cla09g00571 | 1397 | PANTHER | POTASSIUM TRANSPORTER | 681 | 1397 | - | - | |
Cla09g00571 | 1397 | PANTHER | POTASSIUM TRANSPORTER | 362 | 656 | - | - | |
Cla09g00571 | 1397 | PANTHER | POTASSIUM TRANSPORTER | 17 | 362 | - | - | |
Cla09g00571 | 1397 | MobiDBLite | consensus disorder prediction | 663 | 699 | - | - | |
Cla09g00571 | 1397 | TIGRFAM | kup: potassium uptake protein | 720 | 1396 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 | |
Cla09g00571 | 1397 | Pfam | K+ potassium transporter | 721 | 1293 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 | |
Cla09g00571 | 1397 | Pfam | K+ potassium transporter | 54 | 362 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 | |
Cla09g00571 | 1397 | PANTHER | OSMOTIC STRESS POTASSIUM TRANSPORTER | 681 | 1397 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 | |
Cla09g00571 | 1397 | PANTHER | OSMOTIC STRESS POTASSIUM TRANSPORTER | 362 | 656 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 | |
Cla09g00571 | 1397 | PANTHER | OSMOTIC STRESS POTASSIUM TRANSPORTER | 17 | 362 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00571 | Cla-Chr9:5257188 | Cla10g01019 | Cla-Chr10:23590456 | 7.67E-109 | dispersed | |
Cla09g00571 | Cla-Chr9:5257188 | Cla05g02527 | Cla-Chr5:36651067 | 3.68E-49 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00571 | K03549 | - | csv:101213493 | 1353.58 |