Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00597 | ATGGTGGCTGGTGATGACGAACATTTCAGGCATGAGCCGCAACAATATGATTTGCGCTTCCGTGTAGAACAGATTTCTACATGGGTTGTTGTTGCGATGAAGAATATATTTCTTAGCTTACCATTTGATTCCTCCCTTTTGGACTCCTCCCTTTTGGACTCCTCTTCTCTCGATTCTTTTGGCGGTAGAGATAAGTGTGCGCTGAGGACTTGCCCAGTATTCGATCATTTCATGGAATCGTATATTGGAAACACTGTGATGAAGTTGGCTTTGAAAGCAGACCCCGAAGAGCATCGTGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATTGGGCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTCACTGCCATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTATTAACAACCAAAGGCACAAACTCACGTATCCTAGTGTTTAGTGAAGAACTTTTCTTCACTTATGTTCTTCCACCAATTATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGAAACTTTATAACGATCATGTTGTTTGGGGCAGTTGGTACTGTGATCTCTTTTTTCATCATATCACTAGCCCTTGGAGCAATCTTATCAGCGACAGATAGTGTTTGCACCTTGCAGGTGCTTAATCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTTGTTAATGATGCTACTTCTGTCGTATTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATGACCTCATCCAACGGCATTCAGCTTCTTGGAAACTTTTTCTATTTATTTTTTACGAGCACCTTGCTGGGAGCGATTGTTGGGTTGTCCAGTGCATACATCATAAAGAAGCTGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCTGAATTGTGCAATCTAAGTGGTATTCTTACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCACGAGTGACCACCAAGCATACTTTTGCAACATTCTCATTTGTTTCAGAGATTTTCATCTTTCTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTCGGTTTAGTCCTTGTTGCGAGAGCAGCTTTTGTTACAATTTGGTGGGCTGGGCTCATGAGGGGTGCTGTATCTGTGGCCCTTGCTTATAATCAGTTTACGAGGTCAGGGCACACGCAACTACAAGGGAATGCCATCATGATTACTAGCACAATCACAATTGTTCTCATCACCAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCATGATAAACAAATAGACGGCATAATTGTAACAGATTCTCCACTTAAGTCGCTGAATGATCCTCTTCTGCCTGGTGTTGAAGATAATGAATCCGATGCCGGAGGATCGAACATTCCCCGTCCTACCAGCTTACGTATGATGTTGACAACTCCAACTCGTTCTGTCCATTACTATTGGCGGATGTTCGATGATCGATATATGCGTCCTGTTTTTGGTGGAAGAGGCTTTGTACCTTTCATCCCCGACCGGGAAGCGGCTCACTTCACGTTTTTTGCGGTGCTACTCTTTGTCTGTTATCTAATTGTTCGTCTTTTTGAGAAGAAACGTTGGCTGAATGAGTCAATTACTTCCCTAGCTATTGGAATTTTCACTGGAATTATCGTTCTCCTAACGACTAGAGGAAAAAGTTCTCACATCCTAGAATTCAATGAACAGCTTTTCTTCATTTACCTTCTTCCACCCATAATATTTAATGCTGGGTTTCAGGTGAAGAAGAAACAGTTCTTTCGCAACTTTCTGGCAATCTTATTGTTTGGTGCTTTTGGAAGTGTGATATCATTCTTCATCATATCACTAGCACTCGGAGCAATCTTAACAGCGACAGATAGTGTTTGCACCTTGCAAGTTCTTAAACAAGATGAGACACCTTTACTTTATAGTCTGGTCTTTGGGGAAGGTGTGGTCAATGATGCTACCTCTGTGGTACTCTTCAATGCAATCAAGAAATTTGACCTCTCTCACATCACTTCAACAAATGCCATTCGGTTAGCTGGAAGTTTCTTAGGTTTGTTCTTGGGAAGCACACTACTGGGAATTGCAGTTGGGCTGCTATGTGCATTTATAATAAAGAAGCTATCCTTAGGCAGGCACCCTACAGATTATGAAGTTGTTCCGATGATTTTGATGGCCTACCTTTCATATATGATTGCTGAATTGTTGCTTCTTAGTGGTATTCTTAGCGTGTTCTTTTGTGGGATTGTCATGTCTCACTACACATCTTGGAATAATAGGACTGACAGTACCAATAATGGGATTGGCAGTTCCAGACTAATACCACGCCATGCTTTTGCGACATTATCTTTCGTAGCAGAGATCTTCATCTTCCTTTATGTTGGTATGGATGCATTGGATATTGAGAAGTGGAATGTTGTTAGAGAAAGGCCTGGGAAATCAGTTGGAGCAAGTCTTATACTGCTAGGCCTTGTTCTTGTTGGAAGAGCAGCTTTTTTTGCAAGGTCAGAAGAAAAGGAACAAGGGGCTTCGATAATGATAACTAGCACCATCATAATTGTTCTCTTCACAAACGTGGTGTTTGGATTGTTGACCAAGTCCATAGTAAGACGAATGATTCCTCGAATTAACCACGAGTCAAGACATTTATATTTTCCCTTACTTCAAGAAATGAGTGATTCGTTGCTTGATGAGAATGATATTGAATCCGACACCAACGAACTTAACCAACTTCCTCCAGACAGTTTCCTGTCGTTTATGAAATCTCCAACTCAATGTCTCCATTATTATTGGTACAAGTTTGATGATTGCTTCATGCGTCCTGTTTTTGGAGGGAGTGAATCTTCATTGGAGCATCTCACTCCCTCAGCTTCTCCCTGA | 3033 | 41.11 | MVAGDDEHFRHEPQQYDLRFRVEQISTWVVVAMKNIFLSLPFDSSLLDSSLLDSSSLDSFGGRDKCALRTCPVFDHFMESYIGNTVMKLALKADPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFTGTLILLTTKGTNSRILVFSEELFFTYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAVGTVISFFIISLALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVFFKAIQRFDLSHMTSSNGIQLLGNFFYLFFTSTLLGAIVGLSSAYIIKKLHSTDREVALMILMPYLSYMTAELCNLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLGLVLVARAAFVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLITNVVFGLLTKPIVRYMLSLHDKQIDGIIVTDSPLKSLNDPLLPGVEDNESDAGGSNIPRPTSLRMMLTTPTRSVHYYWRMFDDRYMRPVFGGRGFVPFIPDREAAHFTFFAVLLFVCYLIVRLFEKKRWLNESITSLAIGIFTGIIVLLTTRGKSSHILEFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFLAILLFGAFGSVISFFIISLALGAILTATDSVCTLQVLKQDETPLLYSLVFGEGVVNDATSVVLFNAIKKFDLSHITSTNAIRLAGSFLGLFLGSTLLGIAVGLLCAFIIKKLSLGRHPTDYEVVPMILMAYLSYMIAELLLLSGILSVFFCGIVMSHYTSWNNRTDSTNNGIGSSRLIPRHAFATLSFVAEIFIFLYVGMDALDIEKWNVVRERPGKSVGASLILLGLVLVGRAAFFARSEEKEQGASIMITSTIIIVLFTNVVFGLLTKSIVRRMIPRINHESRHLYFPLLQEMSDSLLDENDIESDTNELNQLPPDSFLSFMKSPTQCLHYYWYKFDDCFMRPVFGGSESSLEHLTPSASP | 1010 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5532619 | 5552423 | + | ClCG09G006460.1 | Cla09g00597 | 280017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 561 | 884 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 888 | 997 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 204 | 410 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 87 | 204 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cla09g00597 | 1010 | Gene3D | - | 664 | 713 | - | - | |
Cla09g00597 | 1010 | Gene3D | - | 202 | 251 | - | - | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 888 | 997 | - | - | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 204 | 410 | - | - | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 410 | 558 | - | - | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 87 | 204 | - | - | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 410 | 558 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cla09g00597 | 1010 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 561 | 884 | - | - | |
Cla09g00597 | 1010 | Pfam | Sodium/hydrogen exchanger family | 103 | 469 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cla09g00597 | 1010 | Pfam | Sodium/hydrogen exchanger family | 566 | 882 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cla09g00597 | 1010 | PRINTS | Na+/H+ exchanger signature | 158 | 169 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cla09g00597 | 1010 | PRINTS | Na+/H+ exchanger signature | 172 | 186 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cla09g00597 | 1010 | PRINTS | Na+/H+ exchanger signature | 187 | 195 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g00506 | Cla-Chr6:6145109 | Cla09g00597 | Cla-Chr9:5532619 | 4.80E-148 | dispersed | |
Cla09g00597 | Cla-Chr9:5532619 | Cla09g02040 | Cla-Chr9:37969153 | 1.82E-92 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00597 | - | K14724 | csv:101206431 | 826.624 |