Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00617 ATGGCTGGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGAGTTGTTCCACTGAATACATGGGTGCTTATCTCCAATTTCAAGCTTGCCTACACCATCCTCCGCCGTGCCGATGGAACCTTCAACCGTGAGTTAGCAGAGTATCTCGAGCGTAAAGTTCCGGCCAATGTGATTCCGGTGGATGGGGTTTTCTCATTTGATCATGTTGATCGAGCATCTGGCCTTCTCAACCGAGTTTACCAGCTGGCCCCAGAGAATGAAGCTCGATGGGGCATCATTGATCTGGAGAAGCCTCTAAGCACGTCGAAAGTTGTCCCTGTCATTCTGTTTTTTCATGGTGGAAGTTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACTTTTTGCCGCCGCATCGTAAGTGTATGTAAGGCGGTTGTAGTCTCGGTTAACTACCGTCGGTCACCCGAACACCGATATCCATGTGCGTATGAGGATGGCTGGACTGCACTCAAATGGGTTAAATCAAAGACATGGTTGCAAAGTGGGAAGGATTGTAAGGTTCATGTGTATTTGGCTGGAGACAGTTCTGGTGGCAACATAGCTCATCATGTTGCAGTGAGGGCAGCTGAAGAAGACATCGAGGTACTCGGCAACATCCTTCTTCACCCGATGTTTGGGGGTGAAAAGAGAACTGAATCGGAGAAAAAACTCGATGGTAAATACTTCGTAAGCATTCAAGACCGAGATTGGTACTGGAGAGCTTTTCTCCCTGAAGGAGAAGACAGAGATCATCCAGCTTGTAACATTTTTGGCCCCAGAGCCAAAAGCCTTGTAGGACTTGACTTCCCAAAAAGTTTAGTCGTGGTTGCCGGTTTGGATCTGATGCAAGATTGGCAACTCGCTTATGTGCAAGGCCTAAAAGACTCTGGTCACGACGTGAAACTTCTCTTCCTCGAGCAGGCAACAATTGGGTTCTACTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAAGCAACTTCATCAACCCTTAA 1029 46.45 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRADGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLAPENEARWGIIDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEHRYPCAYEDGWTALKWVKSKTWLQSGKDCKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVSIQDRDWYWRAFLPEGEDRDHPACNIFGPRAKSLVGLDFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEQATIGFYFLPNNEHFYCLMEEISNFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5738031 5740642 + ClCG09G006660.1 Cla09g00617 280037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00617 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Cla09g00617 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Cla09g00617 342 PANTHER ARYLACETAMIDE DEACETYLASE 2 340 - -
Cla09g00617 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Cla09g00617 342 PANTHER GIBBERELLIN RECEPTOR GID1B 2 340 - -
Cla09g00617 342 SUPERFAMILY alpha/beta-Hydrolases 100 341 IPR029058 -
Cla09g00617 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01599 Cla-Chr3:31768523 Cla09g00617 Cla-Chr9:5738031 0 dispersed
Cla09g00617 Cla-Chr9:5738031 Cla08g00163 Cla-Chr8:3173416 9.29E-75 dispersed
Cla09g00617 Cla-Chr9:5738031 Cla11g00796 Cla-Chr11:11540745 5.37E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00617 K14493 - csv:101219912 678.707