Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00626 ATGGAACTGGATGCTCCATCGTTTCTGGAAAGCAATTCGGAGATGGAAGAATGGGAGGATGCGGATCCTCTGCAACACCATGATAATGGAGATGAGTGTGTAAGGAGGCGCTTGGAAGTGGAGTTTCGGAGTGCAACCGAAGCCATTGGAACTCAAATCGCCCGCCCAATCAATGGAGTCGGTAAGGTGAAAAGCGCGATCGACACGCCGGCTTCGGAATCTGAAATTGGAATCTGCTATTGCTTGTCGAGGATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGCCACGCGGGTCAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGGCAGAATGTCTATTACCTCTGGTTGTTGCAATTTCTGGAAGAGTTAGCTCTGATACACCAATAAATTGCGAATTTAGTGGTTTAAGGGGTGTAATTGTGGAGGAAACGGCAGAACAACACTTTTTAAAGCACAATGATGCAGGATCATGGATTCAGGATTCTGCATTGATGCTCTCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTAGGAGCTCGAAATGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTTTTTGAAGAGTCTGGCAGATCCCTTATGCGTGGCACTTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATAGAACGCGTTCTACCTACTGGTACTTCCTTGACTGTTGTTGGTGAGGCTGCCAAAGATGACATTGGTACCATCAGAATTCAACGTCCACACAAAGGACCATTTTATGTCTCCCCAAAAACTATCGATCAACTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTATGCTTCCATGGGTTTGGGTATATTTGGTTTGTATCTGGTCACAAAGCATGCTATTCTTTATCTCATGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTCCTTGCTGCAGCTGCCAAAAGATCAAGCCAAGAAAATGAAGGGGAAAATGAAAAGGCCAGCAATGGAACAGATGGTACAAAGAGAGACCGGTCAATGCCAGATCTTTGTGTAATATGTCTCGAGAGAGACTACAATGCTGTTTTTGTCCCGTAA 1182 45.6 MELDAPSFLESNSEMEEWEDADPLQHHDNGDECVRRRLEVEFRSATEAIGTQIARPINGVGKVKSAIDTPASESEIGICYCLSRMLPWGGLSCCLSAAALYLLGRSSGRDAELLKSATRVNQLKELAQLLEAECLLPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARNATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASMGLGIFGLYLVTKHAILYLMERRRRWELQKRVLAAAAKRSSQENEGENEKASNGTDGTKRDRSMPDLCVICLERDYNAVFVP 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5898231 5909416 - ClCG09G006810.2 Cla09g00626 280046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00626 393 Pfam E3 Ubiquitin ligase 170 320 IPR022170 GO:0004842|GO:0006996|GO:0016567
Cla09g00626 393 PANTHER - 85 393 IPR044231 GO:0004842|GO:0016567
Cla09g00626 393 MobiDBLite consensus disorder prediction 353 371 - -
Cla09g00626 393 MobiDBLite consensus disorder prediction 348 371 - -
Cla09g00626 393 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00626 K15688 - csv:101218196 571.237